RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 WASHC2DQ5SRD0 308 aa17.18■□□□□ 0.34
CIRBP-243ENST00000593128 IRAK1BP1Q5VVH5 260 aa17.18■□□□□ 0.34
CIRBP-243ENST00000593128 OVCH1Q7RTY7 1134 aa17.18■□□□□ 0.34
CIRBP-243ENST00000593128 PARP9Q8IXQ6 854 aa17.18■□□□□ 0.34
CIRBP-243ENST00000593128 MPP5Q8N3R9 675 aa17.18■□□□□ 0.34
CIRBP-243ENST00000593128 MAIP1Q8WWC4 291 aa17.18■□□□□ 0.34
CIRBP-243ENST00000593128 FKBP10Q96AY3 582 aa17.18■□□□□ 0.34
CIRBP-243ENST00000593128 ACAT2Q9BWD1 397 aa17.18■□□□□ 0.34
CIRBP-243ENST00000593128 ZNF552Q9H707 407 aaPredicted RBP17.18■□□□□ 0.34
CIRBP-243ENST00000593128 ZBTB20Q9HC78 741 aaPredicted RBP17.18■□□□□ 0.34
CIRBP-243ENST00000593128 SLC6A20Q9NP91 592 aa17.18■□□□□ 0.34
CIRBP-243ENST00000593128 ABCF3Q9NUQ8 709 aa17.18■□□□□ 0.34
CIRBP-243ENST00000593128 ASF1BQ9NVP2 202 aa17.18■□□□□ 0.34
CIRBP-243ENST00000593128 STOX2Q9P2F5 926 aaPredicted RBP17.18■□□□□ 0.34
CIRBP-243ENST00000593128 PLEKHB1Q9UF11 243 aaPredicted RBP17.18■□□□□ 0.34
CIRBP-243ENST00000593128 ZC3H7BQ9UGR2 993 aaKnown RBP17.18■□□□□ 0.34
CIRBP-243ENST00000593128 MRFAP1Q9Y605 127 aa17.18■□□□□ 0.34
CIRBP-243ENST00000593128 NAV2Q8IVL1 2488 aa17.18■□□□□ 0.34
CIRBP-243ENST00000593128 PFDN6O15212 129 aa17.17■□□□□ 0.34
CIRBP-243ENST00000593128 KLHL41O60662 606 aa17.17■□□□□ 0.34
CIRBP-243ENST00000593128 CTSVO60911 334 aa17.17■□□□□ 0.34
CIRBP-243ENST00000593128 IPO13O94829 963 aaKnown RBP17.17■□□□□ 0.34
CIRBP-243ENST00000593128 CCDC175P0C221 793 aa17.17■□□□□ 0.34
CIRBP-243ENST00000593128 ERVK-10P10266 1014 aa17.17■□□□□ 0.34
CIRBP-243ENST00000593128 RPS3P23396 243 aaKnown RBP eCLIP17.17■□□□□ 0.34
CIRBP-243ENST00000593128 MMP11P24347 488 aa17.17■□□□□ 0.34
CIRBP-243ENST00000593128 VARSP26640 1264 aaKnown RBP17.17■□□□□ 0.34
CIRBP-243ENST00000593128 AIMP2Q13155 320 aaKnown RBP17.17■□□□□ 0.34
CIRBP-243ENST00000593128 FASTKQ14296 549 aaKnown RBP17.17■□□□□ 0.34
CIRBP-243ENST00000593128 NKG7Q16617 165 aa17.17■□□□□ 0.34
CIRBP-243ENST00000593128 FRMPD2BQ6IN97 320 aa17.17■□□□□ 0.34
CIRBP-243ENST00000593128 OR2L3Q8NG85 312 aa17.17■□□□□ 0.34
CIRBP-243ENST00000593128 MAGEC3Q8TD91 643 aa17.17■□□□□ 0.34
CIRBP-243ENST00000593128 ZUFSPQ96AP4 578 aa17.17■□□□□ 0.34
CIRBP-243ENST00000593128 YIPF2Q9BWQ6 316 aa17.17■□□□□ 0.34
CIRBP-243ENST00000593128 IL1RAPL1Q9NZN1 696 aa17.17■□□□□ 0.34
CIRBP-243ENST00000593128 ANKRD12Q6UB98 2062 aa17.17■□□□□ 0.34
CIRBP-243ENST00000593128 HYKKA2RU49 373 aa17.16■□□□□ 0.34
CIRBP-243ENST00000593128 E5RI56 91 aa17.16■□□□□ 0.34
CIRBP-243ENST00000593128 AVILO75366 819 aa17.16■□□□□ 0.34
CIRBP-243ENST00000593128 F7P08709 466 aaPredicted RBP17.16■□□□□ 0.34
CIRBP-243ENST00000593128 CCNFP41002 786 aa17.16■□□□□ 0.34
CIRBP-243ENST00000593128 HIF1AQ16665 826 aa17.16■□□□□ 0.34
CIRBP-243ENST00000593128 FAM214AQ32MH5 1076 aa17.16■□□□□ 0.34
CIRBP-243ENST00000593128 RNF187Q5TA31 235 aaPredicted RBP17.16■□□□□ 0.34
CIRBP-243ENST00000593128 PRAMEF13Q5VWM6 474 aa17.16■□□□□ 0.34
CIRBP-243ENST00000593128 LRRC8BQ6P9F7 803 aa17.16■□□□□ 0.34
CIRBP-243ENST00000593128 DRICH1Q6PGQ1 229 aaPredicted RBP17.16■□□□□ 0.34
CIRBP-243ENST00000593128 COX15Q7KZN9 410 aa17.16■□□□□ 0.34
CIRBP-243ENST00000593128 UBE2Q2Q8WVN8 375 aa17.16■□□□□ 0.34
CIRBP-243ENST00000593128 LPGAT1Q92604 370 aa17.16■□□□□ 0.34
CIRBP-243ENST00000593128 KIFC1Q9BW19 673 aa17.16■□□□□ 0.34
CIRBP-243ENST00000593128 WDR54Q9H977 334 aa17.16■□□□□ 0.34
CIRBP-243ENST00000593128 SAMD15Q9P1V8 674 aa17.16■□□□□ 0.34
CIRBP-243ENST00000593128 SOX13Q9UN79 622 aa17.16■□□□□ 0.34
CIRBP-243ENST00000593128 ZKSCAN5Q9Y2L8 839 aa17.16■□□□□ 0.34
CIRBP-243ENST00000593128 ESPL1Q14674 2120 aa17.15■□□□□ 0.34
CIRBP-243ENST00000593128 LOC105369274A0A096LPK9 316 aa17.15■□□□□ 0.34
CIRBP-243ENST00000593128 LOC102723532A0A0G2JNH3 316 aa17.15■□□□□ 0.34
CIRBP-243ENST00000593128 TARM1B6A8C7 271 aa17.15■□□□□ 0.34
CIRBP-243ENST00000593128 SOCS6O14544 535 aa17.15■□□□□ 0.34
CIRBP-243ENST00000593128 PRICKLE3O43900 615 aaPredicted RBP17.15■□□□□ 0.34
CIRBP-243ENST00000593128 ALBP02768 609 aa17.15■□□□□ 0.34
CIRBP-243ENST00000593128 RNF224P0DH78 156 aa17.15■□□□□ 0.34
CIRBP-243ENST00000593128 PAMP19021 973 aa17.15■□□□□ 0.34
CIRBP-243ENST00000593128 TPSB2P20231 275 aa17.15■□□□□ 0.34
CIRBP-243ENST00000593128 ARNTP27540 789 aa17.15■□□□□ 0.34
CIRBP-243ENST00000593128 CMPK1P30085 196 aa17.15■□□□□ 0.34
CIRBP-243ENST00000593128 RPA3P35244 121 aaPredicted RBP17.15■□□□□ 0.34
CIRBP-243ENST00000593128 YBX1P67809 324 aaKnown RBP17.15■□□□□ 0.34
CIRBP-243ENST00000593128 SARNPP82979 210 aaKnown RBP17.15■□□□□ 0.34
CIRBP-243ENST00000593128 GPS1Q13098 491 aa17.15■□□□□ 0.34
CIRBP-243ENST00000593128 ELOAQ14241 798 aaKnown RBP17.15■□□□□ 0.34
CIRBP-243ENST00000593128 TPSAB1Q15661 275 aa17.15■□□□□ 0.34
CIRBP-243ENST00000593128 TUBB8Q3ZCM7 444 aa17.15■□□□□ 0.34
CIRBP-243ENST00000593128 ACSBG2Q5FVE4 666 aa17.15■□□□□ 0.34
CIRBP-243ENST00000593128 YOD1Q5VVQ6 348 aaPredicted RBP17.15■□□□□ 0.34
CIRBP-243ENST00000593128 SUSD1Q6UWL2 747 aa17.15■□□□□ 0.34
CIRBP-243ENST00000593128 OR4N4Q8N0Y3 316 aa17.15■□□□□ 0.34
CIRBP-243ENST00000593128 CABS1Q96KC9 395 aa17.15■□□□□ 0.34
CIRBP-243ENST00000593128 CNDP1Q96KN2 507 aa17.15■□□□□ 0.34
CIRBP-243ENST00000593128 BIRC8Q96P09 236 aa17.15■□□□□ 0.34
CIRBP-243ENST00000593128 SPSB2Q99619 263 aa17.15■□□□□ 0.34
CIRBP-243ENST00000593128 TRIM56Q9BRZ2 755 aaKnown RBP17.15■□□□□ 0.34
CIRBP-243ENST00000593128 DPH7Q9BTV6 452 aa17.15■□□□□ 0.34
CIRBP-243ENST00000593128 CRB3Q9BUF7 120 aa17.15■□□□□ 0.34
CIRBP-243ENST00000593128 MRM3Q9HC36 420 aaKnown RBP17.15■□□□□ 0.34
CIRBP-243ENST00000593128 ZNF304Q9HCX3 659 aa17.15■□□□□ 0.34
CIRBP-243ENST00000593128 SPATA7Q9P0W8 599 aa17.15■□□□□ 0.34
CIRBP-243ENST00000593128 GALPQ9UBC7 116 aa17.15■□□□□ 0.34
CIRBP-243ENST00000593128 CSAG2Q9Y5P2 127 aa17.15■□□□□ 0.34
CIRBP-243ENST00000593128 HS3ST3B1Q9Y662 390 aa17.15■□□□□ 0.34
CIRBP-243ENST00000593128 COPG1Q9Y678 874 aaKnown RBP17.15■□□□□ 0.34
CIRBP-243ENST00000593128 PRRC2CQ9Y520 2896 aaKnown RBP17.15■□□□□ 0.34
CIRBP-243ENST00000593128 PCM1Q15154 2024 aa17.14■□□□□ 0.34
CIRBP-243ENST00000593128 CTAGE9A4FU28 777 aa17.14■□□□□ 0.33
CIRBP-243ENST00000593128 H3BMM5 538 aa17.14■□□□□ 0.33
CIRBP-243ENST00000593128 SRPX2O60687 465 aaPredicted RBP17.14■□□□□ 0.33
CIRBP-243ENST00000593128 FKBP9O95302 570 aa17.14■□□□□ 0.33
CIRBP-243ENST00000593128 MED26O95402 600 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms