RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 EPN3Q9H201 632 aa13.32□□□□□ -0.28
APOC1-208ENST00000592535 ACSS2Q9NR19 701 aa13.32□□□□□ -0.28
APOC1-208ENST00000592535 GPN3Q9UHW5 284 aaPredicted RBP13.32□□□□□ -0.28
APOC1-208ENST00000592535 ANAPC2Q9UJX6 822 aa13.32□□□□□ -0.28
APOC1-208ENST00000592535 PADI2Q9Y2J8 665 aa13.32□□□□□ -0.28
APOC1-208ENST00000592535 NUP210LQ5VU65 1888 aa13.31□□□□□ -0.28
APOC1-208ENST00000592535 TARM1B6A8C7 271 aa13.31□□□□□ -0.28
APOC1-208ENST00000592535 MYO1CO00159 1063 aa13.31□□□□□ -0.28
APOC1-208ENST00000592535 CNOT3O75175 753 aaKnown RBP13.31□□□□□ -0.28
APOC1-208ENST00000592535 KLF7O75840 302 aaPredicted RBP13.31□□□□□ -0.28
APOC1-208ENST00000592535 WISP1O95388 367 aa13.31□□□□□ -0.28
APOC1-208ENST00000592535 CATP04040 527 aaKnown RBP13.31□□□□□ -0.28
APOC1-208ENST00000592535 ERVK-10P10266 1014 aa13.31□□□□□ -0.28
APOC1-208ENST00000592535 ERGP11308 486 aa13.31□□□□□ -0.28
APOC1-208ENST00000592535 CCL11P51671 97 aa13.31□□□□□ -0.28
APOC1-208ENST00000592535 FOXL2P58012 376 aa13.31□□□□□ -0.28
APOC1-208ENST00000592535 NKAIN1Q4KMZ8 207 aa13.31□□□□□ -0.28
APOC1-208ENST00000592535 SUSD1Q6UWL2 747 aa13.31□□□□□ -0.28
APOC1-208ENST00000592535 ASB18Q6ZVZ8 466 aa13.31□□□□□ -0.28
APOC1-208ENST00000592535 NEK10Q6ZWH5 1172 aa13.31□□□□□ -0.28
APOC1-208ENST00000592535 PCGF5Q86SE9 256 aa13.31□□□□□ -0.28
APOC1-208ENST00000592535 TMEM151BQ8IW70 566 aa13.31□□□□□ -0.28
APOC1-208ENST00000592535 CD200R1Q8TD46 325 aa13.31□□□□□ -0.28
APOC1-208ENST00000592535 PKP4Q99569 1192 aa13.31□□□□□ -0.28
APOC1-208ENST00000592535 NAPGQ99747 312 aaPredicted RBP13.31□□□□□ -0.28
APOC1-208ENST00000592535 EBNA1BP2Q99848 306 aaKnown RBP13.31□□□□□ -0.28
APOC1-208ENST00000592535 C17orf62Q9BQA9 187 aa13.31□□□□□ -0.28
APOC1-208ENST00000592535 AARSD1Q9BTE6 412 aaKnown RBP13.31□□□□□ -0.28
APOC1-208ENST00000592535 ACAT2Q9BWD1 397 aa13.31□□□□□ -0.28
APOC1-208ENST00000592535 ING2Q9H160 280 aa13.31□□□□□ -0.28
APOC1-208ENST00000592535 FAM114A2Q9NRY5 505 aa13.31□□□□□ -0.28
APOC1-208ENST00000592535 IFT80Q9P2H3 777 aaPredicted RBP13.31□□□□□ -0.28
APOC1-208ENST00000592535 NDOR1Q9UHB4 597 aa13.31□□□□□ -0.28
APOC1-208ENST00000592535 DHRS7Q9Y394 339 aa13.31□□□□□ -0.28
APOC1-208ENST00000592535 PTRH2Q9Y3E5 179 aaKnown RBP13.31□□□□□ -0.28
APOC1-208ENST00000592535 A0A1B0GX78 115 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 MPC1LP0DKB6 136 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 ITGAXP20702 1163 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 ALAS2P22557 587 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 OTX2P32243 289 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 CASRP41180 1078 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 ARSFP54793 590 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 VSX2P58304 361 aaPredicted RBP13.3□□□□□ -0.28
APOC1-208ENST00000592535 KLRB1Q12918 225 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 ATP1A4Q13733 1029 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 BBS9Q3SYG4 887 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 SPANXN3Q5MJ09 141 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 FRMPD2BQ6IN97 320 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 MRPL14Q6P1L8 145 aaKnown RBP13.3□□□□□ -0.28
APOC1-208ENST00000592535 CYHR1Q6ZMK1 362 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 TTLL10Q6ZVT0 673 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 RAB43Q86YS6 212 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 IGDCC3Q8IVU1 814 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 CPNE9Q8IYJ1 553 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 C2CD4AQ8NCU7 369 aaPredicted RBP13.3□□□□□ -0.28
APOC1-208ENST00000592535 SMPDL3AQ92484 453 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 DLG3Q92796 817 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 INPP5DQ92835 1189 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 PWWP2AQ96N64 755 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 ZNF285Q96NJ3 590 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 NDNQ99608 321 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 SELENOSQ9BQE4 189 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 TRIM51Q9BSJ1 452 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 SLC25A23Q9BV35 468 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 SLC6A20Q9NP91 592 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 SLC22A11Q9NSA0 550 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 CUTCQ9NTM9 273 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 KLHL42Q9P2K6 505 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 KLK4Q9Y5K2 254 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 SAR1BQ9Y6B6 198 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 COMMD10Q9Y6G5 202 aa13.3□□□□□ -0.28
APOC1-208ENST00000592535 A0A0J9YVX5 310 aa13.29□□□□□ -0.28
APOC1-208ENST00000592535 DSCR3O14972 297 aa13.29□□□□□ -0.28
APOC1-208ENST00000592535 FANCGO15287 622 aa13.29□□□□□ -0.28
APOC1-208ENST00000592535 VPS26AO75436 327 aa13.29□□□□□ -0.28
APOC1-208ENST00000592535 TTC4O95801 387 aa13.29□□□□□ -0.28
APOC1-208ENST00000592535 SLC16A8O95907 504 aa13.29□□□□□ -0.28
APOC1-208ENST00000592535 SYF2O95926 243 aaKnown RBP13.29□□□□□ -0.28
APOC1-208ENST00000592535 ENO3P13929 434 aaPredicted RBP13.29□□□□□ -0.28
APOC1-208ENST00000592535 GABRB3P28472 473 aa13.29□□□□□ -0.28
APOC1-208ENST00000592535 CMPK1P30085 196 aa13.29□□□□□ -0.28
APOC1-208ENST00000592535 RPA3P35244 121 aaPredicted RBP13.29□□□□□ -0.28
APOC1-208ENST00000592535 FOLR3P41439 243 aa13.29□□□□□ -0.28
APOC1-208ENST00000592535 CSRP3P50461 194 aa13.29□□□□□ -0.28
APOC1-208ENST00000592535 PNLIPRP1P54315 467 aa13.29□□□□□ -0.28
APOC1-208ENST00000592535 DR1Q01658 176 aa13.29□□□□□ -0.28
APOC1-208ENST00000592535 KCNC4Q03721 635 aa13.29□□□□□ -0.28
APOC1-208ENST00000592535 TSTA3Q13630 321 aaPredicted RBP13.29□□□□□ -0.28
APOC1-208ENST00000592535 GRM7Q14831 915 aa13.29□□□□□ -0.28
APOC1-208ENST00000592535 ARHGAP19Q14CB8 494 aa13.29□□□□□ -0.28
APOC1-208ENST00000592535 TCTE1Q5JU00 501 aa13.29□□□□□ -0.28
APOC1-208ENST00000592535 WASHC2DQ5SRD0 308 aa13.29□□□□□ -0.28
APOC1-208ENST00000592535 HP1BP3Q5SSJ5 553 aaPredicted RBP13.29□□□□□ -0.28
APOC1-208ENST00000592535 SYDE1Q6ZW31 735 aaPredicted RBP13.29□□□□□ -0.28
APOC1-208ENST00000592535 RNF44Q7L0R7 432 aa13.29□□□□□ -0.28
APOC1-208ENST00000592535 PIWIL4Q7Z3Z4 852 aaKnown RBP13.29□□□□□ -0.28
APOC1-208ENST00000592535 MRGPREQ86SM8 312 aa13.29□□□□□ -0.28
APOC1-208ENST00000592535 DTWD1Q8N5C7 304 aa13.29□□□□□ -0.28
APOC1-208ENST00000592535 TTC29Q8NA56 475 aaPredicted RBP13.29□□□□□ -0.28
APOC1-208ENST00000592535 PPFIBP2Q8ND30 876 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms