RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.09□□□□□ -0.63
VMP1-211ENST00000591315 SH2B3Q9UQQ2 575 aa11.09□□□□□ -0.63
VMP1-211ENST00000591315 MRPS18BQ9Y676 258 aaKnown RBP11.09□□□□□ -0.63
VMP1-211ENST00000591315 IGKV1-8A0A0C4DH67 115 aa11.08□□□□□ -0.64
VMP1-211ENST00000591315 NPEPPSL1A6NEC2 478 aa11.08□□□□□ -0.64
VMP1-211ENST00000591315 E7ENX8 843 aa11.08□□□□□ -0.64
VMP1-211ENST00000591315 H3BMH7 237 aa11.08□□□□□ -0.64
VMP1-211ENST00000591315 ZBTB14O43829 449 aa11.08□□□□□ -0.64
VMP1-211ENST00000591315 KDM1AO60341 852 aa11.08□□□□□ -0.64
VMP1-211ENST00000591315 CTSVO60911 334 aa11.08□□□□□ -0.64
VMP1-211ENST00000591315 SCRG1O75711 98 aa11.08□□□□□ -0.64
VMP1-211ENST00000591315 WISP3O95389 354 aaPredicted RBP11.08□□□□□ -0.64
VMP1-211ENST00000591315 IMPA1P29218 277 aa11.08□□□□□ -0.64
VMP1-211ENST00000591315 RGS4P49798 205 aa11.08□□□□□ -0.64
VMP1-211ENST00000591315 IL2P60568 153 aa11.08□□□□□ -0.64
VMP1-211ENST00000591315 TAP2Q03519 686 aa11.08□□□□□ -0.64
VMP1-211ENST00000591315 FAM69BQ5VUD6 431 aa11.08□□□□□ -0.64
VMP1-211ENST00000591315 UGT3A1Q6NUS8 523 aa11.08□□□□□ -0.64
VMP1-211ENST00000591315 C6orf15Q6UXA7 325 aaPredicted RBP11.08□□□□□ -0.64
VMP1-211ENST00000591315 TMEM126BQ8IUX1 230 aa11.08□□□□□ -0.64
VMP1-211ENST00000591315 TMEM151BQ8IW70 566 aa11.08□□□□□ -0.64
VMP1-211ENST00000591315 GSPT2Q8IYD1 628 aaKnown RBP11.08□□□□□ -0.64
VMP1-211ENST00000591315 MYO1HQ8N1T3 1032 aa11.08□□□□□ -0.64
VMP1-211ENST00000591315 DTWD1Q8N5C7 304 aa11.08□□□□□ -0.64
VMP1-211ENST00000591315 FBXO15Q8NCQ5 510 aaPredicted RBP11.08□□□□□ -0.64
VMP1-211ENST00000591315 OR2L3Q8NG85 312 aa11.08□□□□□ -0.64
VMP1-211ENST00000591315 RBBP8Q99708 897 aa11.08□□□□□ -0.64
VMP1-211ENST00000591315 RAB11FIP5Q9BXF6 653 aa11.08□□□□□ -0.64
VMP1-211ENST00000591315 SLC12A9Q9BXP2 914 aa11.08□□□□□ -0.64
VMP1-211ENST00000591315 ATG10Q9H0Y0 220 aa11.08□□□□□ -0.64
VMP1-211ENST00000591315 STOX2Q9P2F5 926 aaPredicted RBP11.08□□□□□ -0.64
VMP1-211ENST00000591315 TAC3Q9UHF0 121 aa11.08□□□□□ -0.64
VMP1-211ENST00000591315 CROTQ9UKG9 612 aa11.08□□□□□ -0.64
VMP1-211ENST00000591315 CORO1CQ9ULV4 474 aaPredicted RBP11.08□□□□□ -0.64
VMP1-211ENST00000591315 NFU1Q9UMS0 254 aa11.08□□□□□ -0.64
VMP1-211ENST00000591315 PCDHGA4Q9Y5G9 962 aa11.08□□□□□ -0.64
VMP1-211ENST00000591315 BOD1L1Q8NFC6 3051 aa11.08□□□□□ -0.64
VMP1-211ENST00000591315 EIF3FO00303 357 aaPredicted RBP11.07□□□□□ -0.64
VMP1-211ENST00000591315 NKX2-8O15522 239 aa11.07□□□□□ -0.64
VMP1-211ENST00000591315 ACSL3O95573 720 aa11.07□□□□□ -0.64
VMP1-211ENST00000591315 GSTA2P09210 222 aa11.07□□□□□ -0.64
VMP1-211ENST00000591315 FAM153BP0C7A2 387 aa11.07□□□□□ -0.64
VMP1-211ENST00000591315 ZNF37AP17032 561 aaPredicted RBP11.07□□□□□ -0.64
VMP1-211ENST00000591315 MAP4P27816 1152 aaKnown RBP11.07□□□□□ -0.64
VMP1-211ENST00000591315 GP5P40197 560 aa11.07□□□□□ -0.64
VMP1-211ENST00000591315 STAT5AP42229 794 aa11.07□□□□□ -0.64
VMP1-211ENST00000591315 TMPRSS3P57727 454 aa11.07□□□□□ -0.64
VMP1-211ENST00000591315 FOXL2P58012 376 aa11.07□□□□□ -0.64
VMP1-211ENST00000591315 VAC14Q08AM6 782 aa11.07□□□□□ -0.64
VMP1-211ENST00000591315 BMPR2Q13873 1038 aa11.07□□□□□ -0.64
VMP1-211ENST00000591315 USP10Q14694 798 aaKnown RBP11.07□□□□□ -0.64
VMP1-211ENST00000591315 C18orf21Q32NC0 220 aaPredicted RBP11.07□□□□□ -0.64
VMP1-211ENST00000591315 PTCHD3Q3KNS1 767 aa11.07□□□□□ -0.64
VMP1-211ENST00000591315 FAM153CQ494X1 144 aa11.07□□□□□ -0.64
VMP1-211ENST00000591315 GLE1Q53GS7 698 aaKnown RBP11.07□□□□□ -0.64
VMP1-211ENST00000591315 ATP1A1-AS1Q5TC04 95 aa11.07□□□□□ -0.64
VMP1-211ENST00000591315 BROXQ5VW32 411 aa11.07□□□□□ -0.64
VMP1-211ENST00000591315 SBSNQ6UWP8 590 aa11.07□□□□□ -0.64
VMP1-211ENST00000591315 CCDC81Q6ZN84 652 aa11.07□□□□□ -0.64
VMP1-211ENST00000591315 CYS1Q717R9 158 aa11.07□□□□□ -0.64
VMP1-211ENST00000591315 CMC1Q7Z7K0 106 aa11.07□□□□□ -0.64
VMP1-211ENST00000591315 PLD3Q8IV08 490 aa11.07□□□□□ -0.64
VMP1-211ENST00000591315 MCATQ8IVS2 390 aaKnown RBP11.07□□□□□ -0.64
VMP1-211ENST00000591315 SYTL1Q8IYJ3 562 aa11.07□□□□□ -0.64
VMP1-211ENST00000591315 ZNF655Q8N720 491 aaPredicted RBP11.07□□□□□ -0.64
VMP1-211ENST00000591315 MAGEC3Q8TD91 643 aa11.07□□□□□ -0.64
VMP1-211ENST00000591315 CT55Q8WUE5 264 aa11.07□□□□□ -0.64
VMP1-211ENST00000591315 SMPDL3AQ92484 453 aa11.07□□□□□ -0.64
VMP1-211ENST00000591315 ALKBH8Q96BT7 664 aaKnown RBP11.07□□□□□ -0.64
VMP1-211ENST00000591315 TCTN2Q96GX1 697 aa11.07□□□□□ -0.64
VMP1-211ENST00000591315 GPR22Q99680 433 aa11.07□□□□□ -0.64
VMP1-211ENST00000591315 CPNE1Q99829 537 aa11.07□□□□□ -0.64
VMP1-211ENST00000591315 DPH7Q9BTV6 452 aa11.07□□□□□ -0.64
VMP1-211ENST00000591315 CDC42EP4Q9H3Q1 356 aaKnown RBP11.07□□□□□ -0.64
VMP1-211ENST00000591315 L2HGDHQ9H9P8 463 aa11.07□□□□□ -0.64
VMP1-211ENST00000591315 PARVBQ9HBI1 364 aa11.07□□□□□ -0.64
VMP1-211ENST00000591315 CUEDC1Q9NWM3 386 aaPredicted RBP11.07□□□□□ -0.64
VMP1-211ENST00000591315 UTP6Q9NYH9 597 aaKnown RBP11.07□□□□□ -0.64
VMP1-211ENST00000591315 EURLQ9NYK6 297 aa11.07□□□□□ -0.64
VMP1-211ENST00000591315 MTRF1LQ9UGC7 380 aaKnown RBP11.07□□□□□ -0.64
VMP1-211ENST00000591315 TLN1Q9Y490 2541 aaKnown RBP11.07□□□□□ -0.64
VMP1-211ENST00000591315 MED13Q9UHV7 2174 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 CFAP46Q8IYW2 2715 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 LOC105369274A0A096LPK9 316 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 LOC102723532A0A0G2JNH3 316 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 A0A0J9YVX5 310 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 HMX2A2RU54 273 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 K7ENP7 123 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 TERTO14746 1132 aaKnown RBP11.06□□□□□ -0.64
VMP1-211ENST00000591315 ZNF749O43361 778 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 OR2B3O76000 313 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 MED26O95402 600 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 GUCA1CO95843 209 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 STATHP02808 62 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 C8GP07360 202 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 STX2P32856 288 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 RPA3P35244 121 aaPredicted RBP11.06□□□□□ -0.64
VMP1-211ENST00000591315 DLSTP36957 453 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 ATP1A2P50993 1020 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 ITGA1P56199 1179 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms