RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 C9P02748 559 aa16.5■□□□□ 0.23
RPRD1A-209ENST00000590898 POLR2CP19387 275 aaPredicted RBP16.5■□□□□ 0.23
RPRD1A-209ENST00000590898 CCND1P24385 295 aa16.5■□□□□ 0.23
RPRD1A-209ENST00000590898 GGT5P36269 586 aa16.5■□□□□ 0.23
RPRD1A-209ENST00000590898 CFHR1Q03591 330 aa16.5■□□□□ 0.23
RPRD1A-209ENST00000590898 SPIDRQ14159 915 aa16.5■□□□□ 0.23
RPRD1A-209ENST00000590898 PUM1Q14671 1186 aaKnown RBP eCLIP16.5■□□□□ 0.23
RPRD1A-209ENST00000590898 PDK4Q16654 411 aa16.5■□□□□ 0.23
RPRD1A-209ENST00000590898 FAM47EQ6ZV65 393 aa16.5■□□□□ 0.23
RPRD1A-209ENST00000590898 USP53Q70EK8 1073 aa16.5■□□□□ 0.23
RPRD1A-209ENST00000590898 CPLX4Q7Z7G2 160 aa16.5■□□□□ 0.23
RPRD1A-209ENST00000590898 CARFQ8N187 725 aa16.5■□□□□ 0.23
RPRD1A-209ENST00000590898 CD180Q99467 661 aa16.5■□□□□ 0.23
RPRD1A-209ENST00000590898 NRTNQ99748 197 aa16.5■□□□□ 0.23
RPRD1A-209ENST00000590898 EGFL8Q99944 293 aa16.5■□□□□ 0.23
RPRD1A-209ENST00000590898 IQCGQ9H095 443 aaKnown RBP16.5■□□□□ 0.23
RPRD1A-209ENST00000590898 PCBD2Q9H0N5 130 aa16.5■□□□□ 0.23
RPRD1A-209ENST00000590898 SLCO1B3Q9NPD5 702 aa16.5■□□□□ 0.23
RPRD1A-209ENST00000590898 CD274Q9NZQ7 290 aa16.5■□□□□ 0.23
RPRD1A-209ENST00000590898 XPR1Q9UBH6 696 aa16.5■□□□□ 0.23
RPRD1A-209ENST00000590898 PTBP2Q9UKA9 531 aaKnown RBP16.5■□□□□ 0.23
RPRD1A-209ENST00000590898 KRT87PA6NCN2 255 aa16.49■□□□□ 0.23
RPRD1A-209ENST00000590898 GIPC1O14908 333 aa16.49■□□□□ 0.23
RPRD1A-209ENST00000590898 HOXD11P31277 338 aaPredicted RBP16.49■□□□□ 0.23
RPRD1A-209ENST00000590898 DMTNQ08495 405 aa16.49■□□□□ 0.23
RPRD1A-209ENST00000590898 N4BP2L1Q5TBK1 243 aaPredicted RBP16.49■□□□□ 0.23
RPRD1A-209ENST00000590898 MBOAT1Q6ZNC8 495 aa16.49■□□□□ 0.23
RPRD1A-209ENST00000590898 CACTIN-AS1Q8N1I8 211 aa16.49■□□□□ 0.23
RPRD1A-209ENST00000590898 OR4D9Q8NGE8 314 aa16.49■□□□□ 0.23
RPRD1A-209ENST00000590898 OR56A3Q8NH54 315 aa16.49■□□□□ 0.23
RPRD1A-209ENST00000590898 MN1Q10571 1320 aaPredicted RBP16.49■□□□□ 0.23
RPRD1A-209ENST00000590898 TOX3O15405 576 aaPredicted RBP16.49■□□□□ 0.23
RPRD1A-209ENST00000590898 CAPN5O15484 640 aaPredicted RBP16.49■□□□□ 0.23
RPRD1A-209ENST00000590898 S100BP04271 92 aaPredicted RBP16.49■□□□□ 0.23
RPRD1A-209ENST00000590898 PRDX3P30048 256 aaKnown RBP16.49■□□□□ 0.23
RPRD1A-209ENST00000590898 PPM1FP49593 454 aaPredicted RBP16.49■□□□□ 0.23
RPRD1A-209ENST00000590898 FASTKQ14296 549 aaKnown RBP16.49■□□□□ 0.23
RPRD1A-209ENST00000590898 ZXDCQ2QGD7 858 aaPredicted RBP16.49■□□□□ 0.23
RPRD1A-209ENST00000590898 METTL2BQ6P1Q9 378 aaKnown RBP16.49■□□□□ 0.23
RPRD1A-209ENST00000590898 KLHDC8AQ8IYD2 350 aa16.49■□□□□ 0.23
RPRD1A-209ENST00000590898 SGPP1Q9BX95 441 aa16.49■□□□□ 0.23
RPRD1A-209ENST00000590898 ACTR10Q9NZ32 417 aa16.49■□□□□ 0.23
RPRD1A-209ENST00000590898 SEMA5BQ9P283 1151 aa16.49■□□□□ 0.23
RPRD1A-209ENST00000590898 POMT2Q9UKY4 750 aa16.49■□□□□ 0.23
RPRD1A-209ENST00000590898 COL27A1Q8IZC6 1860 aaPredicted RBP16.48■□□□□ 0.23
RPRD1A-209ENST00000590898 A0A1W2PPV9 198 aa16.48■□□□□ 0.23
RPRD1A-209ENST00000590898 SUPT3HB4E1H0 165 aa16.48■□□□□ 0.23
RPRD1A-209ENST00000590898 D6RAR5 112 aa16.48■□□□□ 0.23
RPRD1A-209ENST00000590898 UBXN8O00124 270 aa16.48■□□□□ 0.23
RPRD1A-209ENST00000590898 TK2O00142 265 aa16.48■□□□□ 0.23
RPRD1A-209ENST00000590898 SUPT3HO75486 399 aa16.48■□□□□ 0.23
RPRD1A-209ENST00000590898 IPO13O94829 963 aaKnown RBP16.48■□□□□ 0.23
RPRD1A-209ENST00000590898 SBK3P0C264 359 aa16.48■□□□□ 0.23
RPRD1A-209ENST00000590898 SERPINB4P48594 390 aa16.48■□□□□ 0.23
RPRD1A-209ENST00000590898 ALDH18A1P54886 795 aaKnown RBP16.48■□□□□ 0.23
RPRD1A-209ENST00000590898 INSM1Q01101 510 aaPredicted RBP16.48■□□□□ 0.23
RPRD1A-209ENST00000590898 NAE1Q13564 534 aa16.48■□□□□ 0.23
RPRD1A-209ENST00000590898 CDCP2Q5VXM1 449 aa16.48■□□□□ 0.23
RPRD1A-209ENST00000590898 CGB2Q6NT52 195 aa16.48■□□□□ 0.23
RPRD1A-209ENST00000590898 ZNF574Q6ZN55 896 aaPredicted RBP16.48■□□□□ 0.23
RPRD1A-209ENST00000590898 LMNTD1Q8N9Z9 388 aa16.48■□□□□ 0.23
RPRD1A-209ENST00000590898 ZNF75CPQ92670 426 aaPredicted RBP16.48■□□□□ 0.23
RPRD1A-209ENST00000590898 OR2A14Q96R47 310 aa16.48■□□□□ 0.23
RPRD1A-209ENST00000590898 NUDT22Q9BRQ3 303 aa16.48■□□□□ 0.23
RPRD1A-209ENST00000590898 CCDC177Q9NQR7 707 aaPredicted RBP16.48■□□□□ 0.23
RPRD1A-209ENST00000590898 SPHK1Q9NYA1 384 aa16.48■□□□□ 0.23
RPRD1A-209ENST00000590898 CPSF2Q9P2I0 782 aaKnown RBP16.48■□□□□ 0.23
RPRD1A-209ENST00000590898 PCDHB11Q9Y5F2 797 aa16.48■□□□□ 0.23
RPRD1A-209ENST00000590898 DCDC2BA2VCK2 349 aa16.47■□□□□ 0.23
RPRD1A-209ENST00000590898 GSAPA4D1B5 854 aa16.47■□□□□ 0.23
RPRD1A-209ENST00000590898 NCF1BA6NI72 391 aaPredicted RBP16.47■□□□□ 0.23
RPRD1A-209ENST00000590898 NCF1CA8MVU1 366 aaPredicted RBP16.47■□□□□ 0.23
RPRD1A-209ENST00000590898 ISM1B1AKI9 464 aa16.47■□□□□ 0.23
RPRD1A-209ENST00000590898 PLIN3O60664 434 aa16.47■□□□□ 0.23
RPRD1A-209ENST00000590898 SMIM24O75264 130 aa16.47■□□□□ 0.23
RPRD1A-209ENST00000590898 NCF1P14598 390 aaPredicted RBP16.47■□□□□ 0.23
RPRD1A-209ENST00000590898 HOXB3P14651 431 aaPredicted RBP16.47■□□□□ 0.23
RPRD1A-209ENST00000590898 CSF2RBP32927 897 aa16.47■□□□□ 0.23
RPRD1A-209ENST00000590898 TRA2AQ13595 282 aaKnown RBP eCLIP16.47■□□□□ 0.23
RPRD1A-209ENST00000590898 CAPN13Q6MZZ7 669 aaPredicted RBP16.47■□□□□ 0.23
RPRD1A-209ENST00000590898 RBM44Q6ZP01 1051 aaKnown RBP16.47■□□□□ 0.23
RPRD1A-209ENST00000590898 OR2A1Q8NGT9 310 aa16.47■□□□□ 0.23
RPRD1A-209ENST00000590898 FLVCR1-AS1Q8TAF5 88 aa16.47■□□□□ 0.23
RPRD1A-209ENST00000590898 RDH11Q8TC12 318 aa16.47■□□□□ 0.23
RPRD1A-209ENST00000590898 GRAMD1AQ96CP6 724 aa16.47■□□□□ 0.23
RPRD1A-209ENST00000590898 MIPEPQ99797 713 aa16.47■□□□□ 0.23
RPRD1A-209ENST00000590898 ATG10Q9H0Y0 220 aa16.47■□□□□ 0.23
RPRD1A-209ENST00000590898 C1GALT1Q9NS00 363 aa16.47■□□□□ 0.23
RPRD1A-209ENST00000590898 ATXN7L1Q9ULK2 861 aaPredicted RBP16.47■□□□□ 0.23
RPRD1A-209ENST00000590898 TNPO3Q9Y5L0 923 aaKnown RBP16.47■□□□□ 0.23
RPRD1A-209ENST00000590898 PTPRBP23467 1997 aa16.47■□□□□ 0.23
RPRD1A-209ENST00000590898 TMX2-CTNND1H3BSU7 103 aa16.47■□□□□ 0.23
RPRD1A-209ENST00000590898 CASC3O15234 703 aaKnown RBP16.47■□□□□ 0.23
RPRD1A-209ENST00000590898 TAPBPO15533 448 aa16.47■□□□□ 0.23
RPRD1A-209ENST00000590898 PROCP04070 461 aa16.47■□□□□ 0.23
RPRD1A-209ENST00000590898 GFAPP14136 432 aa16.47■□□□□ 0.23
RPRD1A-209ENST00000590898 BGNP21810 368 aa16.47■□□□□ 0.23
RPRD1A-209ENST00000590898 PEBP1P30086 187 aaKnown RBP16.47■□□□□ 0.23
RPRD1A-209ENST00000590898 SLC6A12P48065 614 aa16.47■□□□□ 0.23
RPRD1A-209ENST00000590898 ZFP36L1Q07352 338 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms