RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 CFAP73A6NFT4 308 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 PRR19A6NJB7 356 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 H0YIV9 168 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 MANBAO00462 879 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 PPP6CO00743 305 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 MYO1DO94832 1006 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 VIPP01282 170 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 LINC00032P0C843 101 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 C1GALT1C1LP0DN25 315 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 ERGP11308 486 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 JUNDP17535 347 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 CNR2P34972 360 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 GRK3P35626 688 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 PXNP49023 591 aaPredicted RBP12.58□□□□□ -0.4
PTBP1-216ENST00000590887 TBPL1P62380 186 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 ERVK-8P63133 956 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 ABATP80404 500 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 CSTF3Q12996 717 aaKnown RBP12.58□□□□□ -0.4
PTBP1-216ENST00000590887 PRKG2Q13237 762 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 CPSF6Q16630 551 aaKnown RBP eCLIP12.58□□□□□ -0.4
PTBP1-216ENST00000590887 ATG9BQ674R7 924 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 MED27Q6P2C8 311 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 CHSY3Q70JA7 882 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 TRIM46Q7Z4K8 759 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 SLC9B2Q86UD5 537 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 C17orf64Q86WR6 236 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 FAM160A2Q8N612 972 aaPredicted RBP12.58□□□□□ -0.4
PTBP1-216ENST00000590887 SPDYE1Q8NFV5 336 aaPredicted RBP12.58□□□□□ -0.4
PTBP1-216ENST00000590887 OR2L8Q8NGY9 312 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 RP9Q8TA86 221 aaKnown RBP12.58□□□□□ -0.4
PTBP1-216ENST00000590887 DNASE2BQ8WZ79 361 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 HSPA12BQ96MM6 686 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 SLC6A18Q96N87 628 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 CDK15Q96Q40 435 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 TMEM168Q9H0V1 697 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 AKTIPQ9H8T0 292 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 PELI2Q9HAT8 420 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 PRDM8Q9NQV8 689 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 PRMT8Q9NR22 394 aaPredicted RBP12.58□□□□□ -0.4
PTBP1-216ENST00000590887 POT1Q9NUX5 634 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 OR6C2Q9NZP2 312 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 DLGAP2Q9P1A6 1054 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 MAPRE3Q9UPY8 281 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 RNF11Q9Y3C5 154 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 ASB1Q9Y576 335 aa12.58□□□□□ -0.4
PTBP1-216ENST00000590887 PCYT1BQ9Y5K3 369 aaPredicted RBP12.58□□□□□ -0.4
PTBP1-216ENST00000590887 PCM1Q15154 2024 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 A0A1W2PR77 199 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 FAM221BA6H8Z2 402 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 VILLO15195 856 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 BCAT2O15382 392 aaPredicted RBP12.57□□□□□ -0.4
PTBP1-216ENST00000590887 WFS1O76024 890 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 FKBP9O95302 570 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 NPPBP16860 134 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 XRCC1P18887 633 aaPredicted RBP12.57□□□□□ -0.4
PTBP1-216ENST00000590887 PTPN4P29074 926 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 PRDX3P30048 256 aaKnown RBP12.57□□□□□ -0.4
PTBP1-216ENST00000590887 SCTRP47872 440 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 AFF3P51826 1226 aaKnown RBP12.57□□□□□ -0.4
PTBP1-216ENST00000590887 FOXA1P55317 472 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 HNRNPKP61978 463 aaKnown RBP eCLIP12.57□□□□□ -0.42e-6■□□□□ 9
PTBP1-216ENST00000590887 MXRA7P84157 204 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 KLF10Q13118 480 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 EIF2B5Q13144 721 aaKnown RBP12.57□□□□□ -0.4
PTBP1-216ENST00000590887 STX5Q13190 355 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 FZD2Q14332 565 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 CLCA4Q14CN2 919 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 HERC3Q15034 1050 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 NR6A1Q15406 480 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 KIF19Q2TAC6 998 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 CCSMST1Q4G0I0 132 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 CACHD1Q5VU97 1274 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 FRG2Q64ET8 278 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 CWF19L1Q69YN2 538 aaKnown RBP12.57□□□□□ -0.4
PTBP1-216ENST00000590887 SLC30A9Q6PML9 568 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 NXPE4Q6UWF7 544 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 XKR5Q6UX68 686 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 RABEPKQ7Z6M1 372 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 MIER2Q8N344 545 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 USP7Q93009 1102 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 KLHL29Q96CT2 875 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 WDR34Q96EX3 536 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 FRG2BQ96QU4 278 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 KCNA7Q96RP8 456 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 AIF1LQ9BQI0 150 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 BRF2Q9HAW0 419 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 C11orf16Q9NQ32 467 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 NOP53Q9NZM5 478 aaKnown RBP12.57□□□□□ -0.4
PTBP1-216ENST00000590887 APOBEC3BQ9UH17 382 aaKnown RBP12.57□□□□□ -0.4
PTBP1-216ENST00000590887 ZNF225Q9UK10 706 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 FBXO4Q9UKT5 387 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 SLC12A4Q9UP95 1085 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 BTRCQ9Y297 605 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 WDR37Q9Y2I8 494 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 TMED5Q9Y3A6 229 aa12.57□□□□□ -0.4
PTBP1-216ENST00000590887 BPTFQ12830 3046 aa12.56□□□□□ -0.4
PTBP1-216ENST00000590887 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.56□□□□□ -0.4
PTBP1-216ENST00000590887 DYTNA2CJ06 578 aa12.56□□□□□ -0.4
PTBP1-216ENST00000590887 TMEM221A6NGB7 291 aa12.56□□□□□ -0.4
PTBP1-216ENST00000590887 CAPN14A8MX76 684 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms