RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 PPT2Q9UMR5 302 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 RUVBL1Q9Y265 456 aaKnown RBP10.09□□□□□ -0.79
VPS25-203ENST00000589520 PCDHB3Q9Y5E6 796 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 SNX13Q9Y5W8 968 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 PLXNB3Q9ULL4 1909 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 TMEM202A6NGA9 273 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 FOXE1O00358 373 aaPredicted RBP10.08□□□□□ -0.8
VPS25-203ENST00000589520 LINC01565O15544 149 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 PCDH8O95206 1070 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 PGRP06401 933 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 BCKDHAP12694 445 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 UQCRBP14927 111 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 ZNF8P17098 575 aaPredicted RBP10.08□□□□□ -0.8
VPS25-203ENST00000589520 AMD1P17707 334 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 DRD1P21728 446 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 CXCR2P25025 360 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 PSMA4P25789 261 aaKnown RBP10.08□□□□□ -0.8
VPS25-203ENST00000589520 ACADLP28330 430 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 NTSR1P30989 418 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 S100A3P33764 101 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 DRD3P35462 400 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 TRIM23P36406 574 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 ASMTP46597 345 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 CDK3Q00526 305 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 HMGCS1Q01581 520 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 LIPEQ05469 1076 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 DMPKQ09013 629 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 SGCGQ13326 291 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 MED21Q13503 144 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 DOC2AQ14183 400 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 ZXDCQ2QGD7 858 aaPredicted RBP10.08□□□□□ -0.8
VPS25-203ENST00000589520 TIGD2Q4W5G0 525 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 C6orf10Q5SRN2 563 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 AGBL4Q5VU57 503 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 ATG9BQ674R7 924 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 MED27Q6P2C8 311 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 DLEU7Q6UYE1 221 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.08□□□□□ -0.8
VPS25-203ENST00000589520 RNF111Q6ZNA4 994 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 HDDC3Q8N4P3 179 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 OXR1Q8N573 874 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 DNAJB14Q8TBM8 379 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 FGF14Q92915 247 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 MSANTD3Q96H12 275 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 ITCHQ96J02 903 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 SLC45A3Q96JT2 553 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 PRPF18Q99633 342 aaKnown RBP10.08□□□□□ -0.8
VPS25-203ENST00000589520 KXD1Q9BQD3 176 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 HAUS8Q9BT25 410 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 SGPP1Q9BX95 441 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 TEX101Q9BY14 249 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 PITHD1Q9GZP4 211 aaPredicted RBP10.08□□□□□ -0.8
VPS25-203ENST00000589520 PCDHAC1Q9H158 963 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 YY1AP1Q9H869 796 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 IL1RL2Q9HB29 575 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 ZDHHC4Q9NPG8 344 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 SPATA6Q9NWH7 488 aaPredicted RBP10.08□□□□□ -0.8
VPS25-203ENST00000589520 SPATA7Q9P0W8 599 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 RIMS3Q9UJD0 308 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 PACSIN3Q9UKS6 424 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 HCN2Q9UL51 889 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 MAN2B2Q9Y2E5 1009 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 COQ6Q9Y2Z9 468 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 DTNAQ9Y4J8 743 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 BDP1A6H8Y1 2624 aa10.08□□□□□ -0.8
VPS25-203ENST00000589520 KIF26AQ9ULI4 1882 aaPredicted RBP10.07□□□□□ -0.8
VPS25-203ENST00000589520 A0A096LPI6 279 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 DHRS12A0PJE2 317 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 ASPDHA6ND91 283 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 IGLON5A6NGN9 336 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 ANHXE9PGG2 379 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 MID1O15344 667 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 DENRO43583 198 aaKnown RBP10.07□□□□□ -0.8
VPS25-203ENST00000589520 KDM1AO60341 852 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 SLC16A8O95907 504 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 DNTTP04053 509 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 HOXC4P09017 264 aaPredicted RBP10.07□□□□□ -0.8
VPS25-203ENST00000589520 C1GALT1C1LP0DN25 315 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 BMP2P12643 396 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 PDHA2P29803 388 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 SERPINB1P30740 379 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 RPL3P39023 403 aaKnown RBP10.07□□□□□ -0.8
VPS25-203ENST00000589520 KIR2DL1P43626 348 aaPredicted RBP10.07□□□□□ -0.8
VPS25-203ENST00000589520 PREPP48147 710 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 TRPC1P48995 793 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 GSK3BP49841 420 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 METAP1P53582 386 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 MRPS21P82921 87 aaKnown RBP10.07□□□□□ -0.8
VPS25-203ENST00000589520 BLMHQ13867 455 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 CAPRIN1Q14444 709 aaKnown RBP10.07□□□□□ -0.8
VPS25-203ENST00000589520 SPIN4Q56A73 249 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 LRIF1Q5T3J3 769 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 METRNLQ641Q3 311 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 NOXRED1Q6NXP6 359 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 LCTLQ6UWM7 567 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 PDZD3Q86UT5 571 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 GPR180Q86V85 440 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 HEATR4Q86WZ0 1026 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 RALGPS2Q86X27 583 aaPredicted RBP10.07□□□□□ -0.8
VPS25-203ENST00000589520 ZNF547Q8IVP9 402 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms