RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 TMEM154Q6P9G4 183 aa17.05■□□□□ 0.32
DNMT1-215ENST00000588913 PPP1R14CQ8TAE6 165 aa17.05■□□□□ 0.32
DNMT1-215ENST00000588913 CERS2Q96G23 380 aa17.05■□□□□ 0.32
DNMT1-215ENST00000588913 CCDC74BQ96LY2 380 aa17.05■□□□□ 0.32
DNMT1-215ENST00000588913 MOCS1Q9NZB8 636 aa17.05■□□□□ 0.32
DNMT1-215ENST00000588913 TSR3Q9UJK0 312 aaKnown RBP17.05■□□□□ 0.32
DNMT1-215ENST00000588913 SATB2Q9UPW6 733 aa17.05■□□□□ 0.32
DNMT1-215ENST00000588913 USP24Q9UPU5 2620 aa17.04■□□□□ 0.32
DNMT1-215ENST00000588913 TAF4O00268 1085 aa17.04■□□□□ 0.32
DNMT1-215ENST00000588913 LINGO3P0C6S8 592 aa17.04■□□□□ 0.32
DNMT1-215ENST00000588913 LEPRP48357 1165 aaKnown RBP17.04■□□□□ 0.32
DNMT1-215ENST00000588913 CYP4F3Q08477 520 aa17.04■□□□□ 0.32
DNMT1-215ENST00000588913 HSPA14Q0VDF9 509 aa17.04■□□□□ 0.32
DNMT1-215ENST00000588913 C3orf38Q5JPI3 329 aa17.04■□□□□ 0.32
DNMT1-215ENST00000588913 PTRHD1Q6GMV3 140 aaKnown RBP17.04■□□□□ 0.32
DNMT1-215ENST00000588913 SDCCAG8Q86SQ7 713 aaPredicted RBP17.04■□□□□ 0.32
DNMT1-215ENST00000588913 PDZD3Q86UT5 571 aa17.04■□□□□ 0.32
DNMT1-215ENST00000588913 OR5AR1Q8NGP9 310 aa17.04■□□□□ 0.32
DNMT1-215ENST00000588913 PPP4R1Q8TF05 950 aa17.04■□□□□ 0.32
DNMT1-215ENST00000588913 NCSTNQ92542 709 aa17.04■□□□□ 0.32
DNMT1-215ENST00000588913 JADE3Q92613 823 aa17.04■□□□□ 0.32
DNMT1-215ENST00000588913 PMEPA1Q969W9 287 aa17.04■□□□□ 0.32
DNMT1-215ENST00000588913 CCDC106Q9BWC9 280 aa17.04■□□□□ 0.32
DNMT1-215ENST00000588913 UCK1Q9HA47 277 aa17.04■□□□□ 0.32
DNMT1-215ENST00000588913 CIDEBQ9UHD4 219 aa17.04■□□□□ 0.32
DNMT1-215ENST00000588913 PSAT1Q9Y617 370 aa17.04■□□□□ 0.32
DNMT1-215ENST00000588913 CCDC189A1A4V9 331 aa17.03■□□□□ 0.32
DNMT1-215ENST00000588913 KRT36O76013 467 aa17.03■□□□□ 0.32
DNMT1-215ENST00000588913 ETV5P41161 510 aa17.03■□□□□ 0.32
DNMT1-215ENST00000588913 AQP5P55064 265 aa17.03■□□□□ 0.32
DNMT1-215ENST00000588913 INHBCP55103 352 aa17.03■□□□□ 0.32
DNMT1-215ENST00000588913 PRKG2Q13237 762 aa17.03■□□□□ 0.32
DNMT1-215ENST00000588913 RBM20Q5T481 1227 aaKnown RBP17.03■□□□□ 0.32
DNMT1-215ENST00000588913 TEDDM1Q5T9Z0 273 aa17.03■□□□□ 0.32
DNMT1-215ENST00000588913 PIM3Q86V86 326 aa17.03■□□□□ 0.32
DNMT1-215ENST00000588913 MYLK4Q86YV6 388 aaPredicted RBP17.03■□□□□ 0.32
DNMT1-215ENST00000588913 C2CD4AQ8NCU7 369 aaPredicted RBP17.03■□□□□ 0.32
DNMT1-215ENST00000588913 WDR48Q8TAF3 677 aa17.03■□□□□ 0.32
DNMT1-215ENST00000588913 PIWIL2Q8TC59 973 aaKnown RBP17.03■□□□□ 0.32
DNMT1-215ENST00000588913 SREK1Q8WXA9 508 aaKnown RBP17.03■□□□□ 0.32
DNMT1-215ENST00000588913 PPM1MQ96MI6 270 aa17.03■□□□□ 0.32
DNMT1-215ENST00000588913 TCF12Q99081 682 aa17.03■□□□□ 0.32
DNMT1-215ENST00000588913 TSC22D3Q99576 134 aa17.03■□□□□ 0.32
DNMT1-215ENST00000588913 TTC1Q99614 292 aa17.03■□□□□ 0.32
DNMT1-215ENST00000588913 KLHL3Q9UH77 587 aa17.03■□□□□ 0.32
DNMT1-215ENST00000588913 GNPTGQ9UJJ9 305 aa17.03■□□□□ 0.32
DNMT1-215ENST00000588913 APC2O95996 2303 aa17.02■□□□□ 0.32
DNMT1-215ENST00000588913 DPPA5A6NC42 116 aa17.02■□□□□ 0.32
DNMT1-215ENST00000588913 KLHL33A6NCF5 533 aa17.02■□□□□ 0.32
DNMT1-215ENST00000588913 UBXN7O94888 489 aa17.02■□□□□ 0.32
DNMT1-215ENST00000588913 AHSGP02765 367 aa17.02■□□□□ 0.32
DNMT1-215ENST00000588913 PROS1P07225 676 aa17.02■□□□□ 0.32
DNMT1-215ENST00000588913 THRAP10827 490 aa17.02■□□□□ 0.32
DNMT1-215ENST00000588913 PKMP14618 531 aaKnown RBP17.02■□□□□ 0.32
DNMT1-215ENST00000588913 ITIH1P19827 911 aa17.02■□□□□ 0.32
DNMT1-215ENST00000588913 CCKBRP32239 447 aa17.02■□□□□ 0.32
DNMT1-215ENST00000588913 LIMK2P53671 638 aa17.02■□□□□ 0.32
DNMT1-215ENST00000588913 EPHA4P54764 986 aa17.02■□□□□ 0.32
DNMT1-215ENST00000588913 GPLD1P80108 840 aa17.02■□□□□ 0.32
DNMT1-215ENST00000588913 RPA4Q13156 261 aa17.02■□□□□ 0.32
DNMT1-215ENST00000588913 RCN2Q14257 317 aa17.02■□□□□ 0.32
DNMT1-215ENST00000588913 GBX1Q14549 363 aa17.02■□□□□ 0.32
DNMT1-215ENST00000588913 SNAP47Q5SQN1 464 aa17.02■□□□□ 0.32
DNMT1-215ENST00000588913 PHF19Q5T6S3 580 aa17.02■□□□□ 0.32
DNMT1-215ENST00000588913 CNTN4Q8IWV2 1026 aa17.02■□□□□ 0.32
DNMT1-215ENST00000588913 SLC22A15Q8IZD6 547 aa17.02■□□□□ 0.32
DNMT1-215ENST00000588913 ACVR1CQ8NER5 493 aa17.02■□□□□ 0.32
DNMT1-215ENST00000588913 TFGQ92734 400 aaPredicted RBP17.02■□□□□ 0.32
DNMT1-215ENST00000588913 SH3KBP1Q96B97 665 aa17.02■□□□□ 0.32
DNMT1-215ENST00000588913 RILPQ96NA2 401 aa17.02■□□□□ 0.32
DNMT1-215ENST00000588913 FERD3LQ96RJ6 166 aa17.02■□□□□ 0.32
DNMT1-215ENST00000588913 NDNQ99608 321 aa17.02■□□□□ 0.32
DNMT1-215ENST00000588913 SH3GL3Q99963 347 aa17.02■□□□□ 0.32
DNMT1-215ENST00000588913 HGH1Q9BTY7 390 aa17.02■□□□□ 0.32
DNMT1-215ENST00000588913 XKR8Q9H6D3 395 aa17.02■□□□□ 0.32
DNMT1-215ENST00000588913 KIR3DX1Q9H7L2 352 aa17.02■□□□□ 0.32
DNMT1-215ENST00000588913 INTS10Q9NVR2 710 aaKnown RBP17.02■□□□□ 0.32
DNMT1-215ENST00000588913 NDE1Q9NXR1 346 aa17.02■□□□□ 0.32
DNMT1-215ENST00000588913 PLAGL1Q9UM63 463 aa17.02■□□□□ 0.32
DNMT1-215ENST00000588913 A8MU76 341 aa17.02■□□□□ 0.31
DNMT1-215ENST00000588913 QSOX1O00391 747 aa17.02■□□□□ 0.31
DNMT1-215ENST00000588913 DUX1O43812 170 aa17.02■□□□□ 0.31
DNMT1-215ENST00000588913 ENO1P06733 434 aaKnown RBP17.02■□□□□ 0.31
DNMT1-215ENST00000588913 PRDX6P30041 224 aa17.02■□□□□ 0.31
DNMT1-215ENST00000588913 CLCN7P51798 805 aa17.02■□□□□ 0.31
DNMT1-215ENST00000588913 ADARP55265 1226 aaKnown RBP17.02■□□□□ 0.31
DNMT1-215ENST00000588913 RTP5Q14D33 572 aa17.02■□□□□ 0.31
DNMT1-215ENST00000588913 CCSMST1Q4G0I0 132 aa17.02■□□□□ 0.31
DNMT1-215ENST00000588913 TMEM71Q6P5X7 295 aa17.02■□□□□ 0.31
DNMT1-215ENST00000588913 CDHR3Q6ZTQ4 885 aa17.02■□□□□ 0.31
DNMT1-215ENST00000588913 ULK2Q8IYT8 1036 aa17.02■□□□□ 0.31
DNMT1-215ENST00000588913 RBM15BQ8NDT2 890 aaKnown RBP17.02■□□□□ 0.31
DNMT1-215ENST00000588913 OR10G6Q8NH81 332 aa17.02■□□□□ 0.31
DNMT1-215ENST00000588913 ZFAND2BQ8WV99 257 aa17.02■□□□□ 0.31
DNMT1-215ENST00000588913 C12orf65Q9H3J6 166 aaKnown RBP17.02■□□□□ 0.31
DNMT1-215ENST00000588913 CFAP47Q6ZTR5 3102 aa17.01■□□□□ 0.31
DNMT1-215ENST00000588913 CXorf49A8MYA2 514 aaPredicted RBP17.01■□□□□ 0.31
DNMT1-215ENST00000588913 BRINP1O60477 761 aa17.01■□□□□ 0.31
DNMT1-215ENST00000588913 H2AFYO75367 372 aaKnown RBP17.01■□□□□ 0.31
DNMT1-215ENST00000588913 SLCO2B1O94956 709 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms