RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 L3MBTL4Q8NA19 623 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 SGCDQ92629 289 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 RIBC2Q9H4K1 309 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 AASDHPPTQ9NRN7 309 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 VPS51Q9UID3 782 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 NDRG4Q9ULP0 352 aaKnown RBP18.09■□□□□ 0.49
DDX39A-206ENST00000587730 CORO2BQ9UQ03 480 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 PCDHGA10Q9Y5H3 936 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 BACE2Q9Y5Z0 518 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 VWA8A3KMH1 1905 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 CXorf51AA0A1B0GTR3 108 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 CLDN24A6NM45 220 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 AGAP14A8MT82 685 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 TSPAN3O60637 253 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 HIST1H2AGP0C0S8 130 aaPredicted RBP18.09■□□□□ 0.49
DDX39A-206ENST00000587730 PFKLP17858 780 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 HIST1H2ADP20671 130 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 PRKACGP22612 351 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 PPIBP23284 216 aaKnown RBP18.09■□□□□ 0.49
DDX39A-206ENST00000587730 GDF5P43026 501 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 C21orf58P58505 322 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 VEZF1Q14119 521 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 GTDC1Q4AE62 458 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 KIAA1614Q5VZ46 1190 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 TUBA3EQ6PEY2 450 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 CPA6Q8N4T0 437 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 OR6Q1Q8NGQ2 317 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 LKAAEAR1Q8TD35 194 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 TRMT2BQ96GJ1 504 aaKnown RBP18.09■□□□□ 0.49
DDX39A-206ENST00000587730 HIST1H2AHQ96KK5 128 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 B3GALT6Q96L58 329 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 CASD1Q96PB1 797 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 ZNF300Q96RE9 604 aaPredicted RBP18.09■□□□□ 0.49
DDX39A-206ENST00000587730 LYSMD1Q96S90 227 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 PITX2Q99697 317 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 HIST1H2AJQ99878 128 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 H2AFJQ9BTM1 129 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 BOCQ9BWV1 1114 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 ATP13A3Q9H7F0 1226 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 FAM120CQ9NX05 1096 aaKnown RBP18.09■□□□□ 0.49
DDX39A-206ENST00000587730 RNF186Q9NXI6 227 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 ARL15Q9NXU5 204 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 OR51B4Q9Y5P0 310 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 DGKBQ9Y6T7 804 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 CENPFP49454 3210 aa18.09■□□□□ 0.49
DDX39A-206ENST00000587730 AREL1O15033 823 aa18.08■□□□□ 0.48
DDX39A-206ENST00000587730 EPN2O95208 641 aa18.08■□□□□ 0.48
DDX39A-206ENST00000587730 NADKO95544 446 aaPredicted RBP18.08■□□□□ 0.48
DDX39A-206ENST00000587730 ZNF682O95780 498 aa18.08■□□□□ 0.48
DDX39A-206ENST00000587730 PDYNP01213 254 aa18.08■□□□□ 0.48
DDX39A-206ENST00000587730 EIF2S1P05198 315 aaKnown RBP18.08■□□□□ 0.48
DDX39A-206ENST00000587730 ITGB6P18564 788 aa18.08■□□□□ 0.48
DDX39A-206ENST00000587730 HPCAL1P37235 193 aa18.08■□□□□ 0.48
DDX39A-206ENST00000587730 RPIAP49247 311 aa18.08■□□□□ 0.48
DDX39A-206ENST00000587730 MBTPS1Q14703 1052 aa18.08■□□□□ 0.48
DDX39A-206ENST00000587730 VMACQ2NL98 169 aa18.08■□□□□ 0.48
DDX39A-206ENST00000587730 NEK5Q6P3R8 708 aa18.08■□□□□ 0.48
DDX39A-206ENST00000587730 REM2Q8IYK8 340 aaPredicted RBP18.08■□□□□ 0.48
DDX39A-206ENST00000587730 TTC29Q8NA56 475 aaPredicted RBP18.08■□□□□ 0.48
DDX39A-206ENST00000587730 CNIH3Q8TBE1 160 aa18.08■□□□□ 0.48
DDX39A-206ENST00000587730 GLMNQ92990 594 aa18.08■□□□□ 0.48
DDX39A-206ENST00000587730 FCRL1Q96LA6 429 aa18.08■□□□□ 0.48
DDX39A-206ENST00000587730 SLC12A9Q9BXP2 914 aa18.08■□□□□ 0.48
DDX39A-206ENST00000587730 ZDHHC3Q9NYG2 299 aa18.08■□□□□ 0.48
DDX39A-206ENST00000587730 KIF17Q9P2E2 1029 aa18.08■□□□□ 0.48
DDX39A-206ENST00000587730 TSR3Q9UJK0 312 aaKnown RBP18.08■□□□□ 0.48
DDX39A-206ENST00000587730 UTS2RQ9UKP6 389 aa18.08■□□□□ 0.48
DDX39A-206ENST00000587730 ISPDA4D126 451 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 UGDHO60701 494 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 TBL1XO60907 577 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 XYLBO75191 536 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 ALDH1A1P00352 501 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 SEMG1P04279 462 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 ALPIP09923 528 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 MPC1LP0DKB6 136 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 GPX2P18283 190 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 EFNA1P20827 205 aaPredicted RBP18.07■□□□□ 0.48
DDX39A-206ENST00000587730 ACLYP53396 1101 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 LRRC74AQ0VAA2 488 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 CDH18Q13634 790 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 CLCA4Q14CN2 919 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 MAD2L1BPQ15013 274 aaPredicted RBP18.07■□□□□ 0.48
DDX39A-206ENST00000587730 CYP2A13Q16696 494 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 HIST2H2ACQ16777 129 aaPredicted RBP18.07■□□□□ 0.48
DDX39A-206ENST00000587730 PGS1Q32NB8 556 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 AGAP7PQ5VUJ5 663 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 DOK6Q6PKX4 331 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 TPGS1Q6ZTW0 290 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 EIF3MQ7L2H7 374 aaKnown RBP18.07■□□□□ 0.48
DDX39A-206ENST00000587730 CYP4Z1Q86W10 505 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 PAF1Q8N7H5 531 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 DYNC2LI1Q8TCX1 351 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 NUDT8Q8WV74 236 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 REEP1Q9H902 201 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 THG1LQ9NWX6 298 aaKnown RBP18.07■□□□□ 0.48
DDX39A-206ENST00000587730 ERVK-18Q9QC07 812 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 AFF4Q9UHB7 1163 aaKnown RBP18.07■□□□□ 0.48
DDX39A-206ENST00000587730 LRFN2Q9ULH4 789 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 DOLKQ9UPQ8 538 aa18.07■□□□□ 0.48
DDX39A-206ENST00000587730 DLGAP4Q9Y2H0 992 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms