RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 SFTPA2Q8IWL1 248 aa8.2□□□□□ -1.1
NEDD4L-218ENST00000587547 SRRM1Q8IYB3 904 aaKnown RBP8.2□□□□□ -1.1
NEDD4L-218ENST00000587547 SLC22A15Q8IZD6 547 aa8.2□□□□□ -1.1
NEDD4L-218ENST00000587547 C4orf33Q8N1A6 199 aa8.2□□□□□ -1.1
NEDD4L-218ENST00000587547 MYO1HQ8N1T3 1032 aa8.2□□□□□ -1.1
NEDD4L-218ENST00000587547 GOLGA6L1Q8N7Z2 621 aa8.2□□□□□ -1.1
NEDD4L-218ENST00000587547 MZB1Q8WU39 189 aa8.2□□□□□ -1.1
NEDD4L-218ENST00000587547 KCTD4Q8WVF5 259 aa8.2□□□□□ -1.1
NEDD4L-218ENST00000587547 ANKRD49Q8WVL7 239 aa8.2□□□□□ -1.1
NEDD4L-218ENST00000587547 PATE1Q8WXA2 126 aa8.2□□□□□ -1.1
NEDD4L-218ENST00000587547 GTPBP3Q969Y2 492 aaKnown RBP8.2□□□□□ -1.1
NEDD4L-218ENST00000587547 C12orf66Q96MD2 445 aa8.2□□□□□ -1.1
NEDD4L-218ENST00000587547 TSNARE1Q96NA8 513 aa8.2□□□□□ -1.1
NEDD4L-218ENST00000587547 DEPDC7Q96QD5 511 aa8.2□□□□□ -1.1
NEDD4L-218ENST00000587547 OR52A5Q9H2C5 316 aa8.2□□□□□ -1.1
NEDD4L-218ENST00000587547 ACBD3Q9H3P7 528 aa8.2□□□□□ -1.1
NEDD4L-218ENST00000587547 DPEP2Q9H4A9 486 aa8.2□□□□□ -1.1
NEDD4L-218ENST00000587547 VIPAS39Q9H9C1 493 aa8.2□□□□□ -1.1
NEDD4L-218ENST00000587547 POPDC3Q9HBV1 291 aa8.2□□□□□ -1.1
NEDD4L-218ENST00000587547 TMBIM4Q9HC24 238 aa8.2□□□□□ -1.1
NEDD4L-218ENST00000587547 SYTL2Q9HCH5 934 aa8.2□□□□□ -1.1
NEDD4L-218ENST00000587547 IMP3Q9NV31 184 aaKnown RBP8.2□□□□□ -1.1
NEDD4L-218ENST00000587547 ACSL5Q9ULC5 683 aa8.2□□□□□ -1.1
NEDD4L-218ENST00000587547 WDR37Q9Y2I8 494 aa8.2□□□□□ -1.1
NEDD4L-218ENST00000587547 ACOT9Q9Y305 439 aa8.2□□□□□ -1.1
NEDD4L-218ENST00000587547 CFAP20Q9Y6A4 193 aaKnown RBP8.2□□□□□ -1.1
NEDD4L-218ENST00000587547 UTP20O75691 2785 aaKnown RBP8.2□□□□□ -1.1
NEDD4L-218ENST00000587547 NPEPPSL1A6NEC2 478 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 NEMP2A6NFY4 417 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 PRR19A6NJB7 356 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 OR52A4PA6NMU1 304 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 LMO7DNF2Z398 122 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 AGPSO00116 658 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 IFRD1O00458 451 aaPredicted RBP8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 MAP2K7O14733 419 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 SLCO2B1O94956 709 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 LTA4HP09960 611 aaKnown RBP8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 MPC1LP0DKB6 136 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 CBSLP0DN79 551 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 F3P13726 295 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 ENO3P13929 434 aaPredicted RBP8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 ATP5DP30049 168 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 CBSP35520 551 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 HALP42357 657 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 MAGEA12P43365 314 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 BDKRB1P46663 353 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 GLRBP48167 497 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 MAZP56270 477 aaKnown RBP8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 PLOD1Q02809 727 aaPredicted RBP8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 DLG1Q12959 904 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 RPA4Q13156 261 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 KRT33BQ14525 404 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 CLCA4Q14CN2 919 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 RASA2Q15283 850 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 TIFABQ6ZNK6 161 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 TRABD2AQ86V40 505 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 TRIM48Q8IWZ4 208 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 PLD6Q8N2A8 252 aaKnown RBP8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 SLC25A45Q8N413 288 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 NKAPQ8N5F7 415 aaKnown RBP8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 PHC3Q8NDX5 983 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 EXT2Q93063 718 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 ISL2Q96A47 359 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 NXNL1Q96CM4 212 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 CXorf40BQ96DE9 158 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 PRR11Q96HE9 360 aaPredicted RBP8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 CABS1Q96KC9 395 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 SCYL1Q96KG9 808 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 FOPNLQ96NB1 174 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 SLC46A1Q96NT5 459 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 FERD3LQ96RJ6 166 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 CCNL2Q96S94 520 aaPredicted RBP8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 EPN3Q9H201 632 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 KLHL42Q9P2K6 505 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 CIDEBQ9UHD4 219 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 ATXN7L1Q9ULK2 861 aaPredicted RBP8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 CDYLQ9Y232 598 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 ICE1Q9Y2F5 2266 aa8.19□□□□□ -1.1
NEDD4L-218ENST00000587547 SPTBN1Q01082 2364 aaKnown RBP8.18□□□□□ -1.1
NEDD4L-218ENST00000587547 A6NCN8 305 aa8.18□□□□□ -1.1
NEDD4L-218ENST00000587547 CDRT15L2A8MXV6 281 aa8.18□□□□□ -1.1
NEDD4L-218ENST00000587547 EIF3FO00303 357 aaPredicted RBP8.18□□□□□ -1.1
NEDD4L-218ENST00000587547 CDC7O00311 574 aa8.18□□□□□ -1.1
NEDD4L-218ENST00000587547 BTN3A1O00481 513 aa8.18□□□□□ -1.1
NEDD4L-218ENST00000587547 COPEO14579 308 aa8.18□□□□□ -1.1
NEDD4L-218ENST00000587547 ZBTB14O43829 449 aa8.18□□□□□ -1.1
NEDD4L-218ENST00000587547 SPAG7O75391 227 aa8.18□□□□□ -1.1
NEDD4L-218ENST00000587547 KLHL2O95198 593 aa8.18□□□□□ -1.1
NEDD4L-218ENST00000587547 WISP3O95389 354 aaPredicted RBP8.18□□□□□ -1.1
NEDD4L-218ENST00000587547 TSPAN12O95859 305 aa8.18□□□□□ -1.1
NEDD4L-218ENST00000587547 SYF2O95926 243 aaKnown RBP8.18□□□□□ -1.1
NEDD4L-218ENST00000587547 ALPPL2P10696 532 aa8.18□□□□□ -1.1
NEDD4L-218ENST00000587547 MTHFD1P11586 935 aaKnown RBP8.18□□□□□ -1.1
NEDD4L-218ENST00000587547 SLC2A4P14672 509 aa8.18□□□□□ -1.1
NEDD4L-218ENST00000587547 BRAFP15056 766 aa8.18□□□□□ -1.1
NEDD4L-218ENST00000587547 CD1DP15813 335 aa8.18□□□□□ -1.1
NEDD4L-218ENST00000587547 KRT4P19013 534 aa8.18□□□□□ -1.1
NEDD4L-218ENST00000587547 RBMS1P29558 406 aaKnown RBP8.18□□□□□ -1.1
NEDD4L-218ENST00000587547 SOX18P35713 384 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms