RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 JUNDP17535 347 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 FSHRP23945 695 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 HNF1BP35680 557 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 CHRNA6Q15825 494 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 PGS1Q32NB8 556 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 TTLL9Q3SXZ7 439 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 GPR33Q49SQ1 333 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 CARD16Q5EG05 197 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 CAPN13Q6MZZ7 669 aaPredicted RBP16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 ZNF551Q7Z340 670 aaPredicted RBP16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 B3GNT8Q7Z7M8 397 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 SLCO6A1Q86UG4 719 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 ADGRG2Q8IZP9 1017 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 FAM9CQ8IZT9 166 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 OR7A2PQ8NGA2 310 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 RORBQ92753 470 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 ALG14Q96F25 216 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 TSSK3Q96PN8 268 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 BARD1Q99728 777 aaKnown RBP16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 DUSP21Q9H596 190 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 ERVK-18Q9QC07 812 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 PPT2Q9UMR5 302 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 KPNA4O00629 521 aaPredicted RBP16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 SCAMP3O14828 347 aaKnown RBP16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 SLC22A1O15245 554 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 TACR1P25103 407 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 CD6P30203 668 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 CSKP41240 450 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 RPIAP49247 311 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 SLC35A2P78381 396 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 SIM2Q14190 667 aaPredicted RBP16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 TRIM16LQ309B1 348 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 NXPE1Q8N323 547 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 SELENOMQ8WWX9 145 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 WDR12Q9GZL7 423 aaKnown RBP16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 IL1RAPQ9NPH3 570 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 AKIP1Q9NQ31 210 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 NECTIN3Q9NQS3 549 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 ARL15Q9NXU5 204 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 ABCG2Q9UNQ0 655 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 TPRKBQ9Y3C4 175 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 YIPF1Q9Y548 306 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 PCDHGA10Q9Y5H3 936 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 CPQQ9Y646 472 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 HSPE1-MOB4S4R3N1 261 aa16.41■□□□□ 0.22
PRKCSH-205ENST00000587327 MAN1A2O60476 641 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 ABLIM3O94929 683 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 ZNF682O95780 498 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 FMO3P31513 532 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 VEGFBP49765 207 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 DAPP51397 102 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 NEK2P51955 445 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 ARHGDIAP52565 204 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 CXCR4P61073 352 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 BCL2L1Q07817 233 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 PLD1Q13393 1074 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 KEAP1Q14145 624 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 OXA1LQ15070 435 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 NPTX1Q15818 432 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 ADPRMQ3LIE5 342 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 CDKL4Q5MAI5 379 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 KDM4DQ6B0I6 523 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 OR2T5Q6IEZ7 315 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 KIAA1841Q6NSI8 718 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 TTC23LQ6PF05 361 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 DOK6Q6PKX4 331 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 CEP68Q76N32 757 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 SERPINA11Q86U17 422 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 ELMOD1Q8N336 334 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 OR2T29Q8NH02 315 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 ALPK1Q96QP1 1244 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 RIBC2Q9H4K1 309 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 ELOVL6Q9H5J4 265 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 AASDHPPTQ9NRN7 309 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 TRNAU1APQ9NX07 287 aaKnown RBP16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 ERVW-1Q9UQF0 538 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 ANAPC1Q9H1A4 1944 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 RFXANKO14593 260 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 SMAD6O43541 496 aaKnown RBP16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 CBSLP0DN79 551 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 SDC1P18827 310 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 CBSP35520 551 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 CLK3P49761 638 aaKnown RBP16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 SLC14A1Q13336 389 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 LAPTM4AQ15012 233 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 ARHGEF6Q15052 776 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 ANKRD33Q7Z3H0 272 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 PAF1Q8N7H5 531 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 DCAF4L2Q8NA75 395 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 ZNF461Q8TAF7 563 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 WFDC5Q8TCV5 224 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 HHIPQ96QV1 700 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 MROQ9BYG7 248 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 TM9SF3Q9HD45 589 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 KCTD5Q9NXV2 234 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 GPRC5BQ9NZH0 403 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 PAIP2BQ9ULR5 123 aaKnown RBP16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 SNX6Q9UNH7 406 aa16.4■□□□□ 0.22
PRKCSH-205ENST00000587327 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.39■□□□□ 0.21
PRKCSH-205ENST00000587327 A8MX80 341 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms