RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 RPLP0P05388 317 aaKnown RBP16.38■□□□□ 0.21
PRKCSH-203ENST00000586486 POLR2CP19387 275 aaPredicted RBP16.38■□□□□ 0.21
PRKCSH-203ENST00000586486 EEF1DP29692 281 aaKnown RBP16.38■□□□□ 0.21
PRKCSH-203ENST00000586486 ALDH3A1P30838 453 aa16.38■□□□□ 0.21
PRKCSH-203ENST00000586486 WDR4P57081 412 aaKnown RBP16.38■□□□□ 0.21
PRKCSH-203ENST00000586486 TRIP6Q15654 476 aaKnown RBP16.38■□□□□ 0.21
PRKCSH-203ENST00000586486 HHATQ5VTY9 493 aa16.38■□□□□ 0.21
PRKCSH-203ENST00000586486 ARMC6Q6NXE6 501 aa16.38■□□□□ 0.21
PRKCSH-203ENST00000586486 SUSD1Q6UWL2 747 aa16.38■□□□□ 0.21
PRKCSH-203ENST00000586486 LCTLQ6UWM7 567 aa16.38■□□□□ 0.21
PRKCSH-203ENST00000586486 TAX1BP1Q86VP1 789 aa16.38■□□□□ 0.21
PRKCSH-203ENST00000586486 THOC6Q86W42 341 aaKnown RBP16.38■□□□□ 0.21
PRKCSH-203ENST00000586486 C10orf107Q8IVU9 208 aa16.38■□□□□ 0.21
PRKCSH-203ENST00000586486 C2orf73Q8N5S3 287 aaPredicted RBP16.38■□□□□ 0.21
PRKCSH-203ENST00000586486 DEFB124Q8NES8 71 aa16.38■□□□□ 0.21
PRKCSH-203ENST00000586486 OR2A1Q8NGT9 310 aa16.38■□□□□ 0.21
PRKCSH-203ENST00000586486 OR2A14Q96R47 310 aa16.38■□□□□ 0.21
PRKCSH-203ENST00000586486 OR4K3Q96R72 315 aa16.38■□□□□ 0.21
PRKCSH-203ENST00000586486 DPYSL5Q9BPU6 564 aa16.38■□□□□ 0.21
PRKCSH-203ENST00000586486 OPTCQ9UBM4 332 aa16.38■□□□□ 0.21
PRKCSH-203ENST00000586486 PCM1Q15154 2024 aa16.38■□□□□ 0.21
PRKCSH-203ENST00000586486 GSAPA4D1B5 854 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 NTN3O00634 580 aaPredicted RBP16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 E2F3O00716 465 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 TRIM13O60858 407 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 RFPL3O75679 317 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 WDR47O94967 919 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 CPNE6O95741 557 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 C9P02748 559 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 UGT2B7P16662 529 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 IMPDH1P20839 514 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 CSF2RBP32927 897 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 GDF5P43026 501 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 NAA20P61599 178 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 ASPHQ12797 758 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 SLC5A12Q1EHB4 618 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 FBXO48Q5FWF7 155 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 ZNF678Q5SXM1 525 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 NKAIN2Q5VXU1 208 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 SPESP1Q6UW49 350 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 PLXDC1Q8IUK5 500 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 SREK1Q8WXA9 508 aaKnown RBP16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 ESAMQ96AP7 390 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 CD180Q99467 661 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 HAUS8Q9BT25 410 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 MECRQ9BV79 373 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 DNAJC11Q9NVH1 559 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 TOR4AQ9NXH8 423 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 TAC3Q9UHF0 121 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 PCTPQ9UKL6 214 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 SLC22A14Q9Y267 594 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 COL27A1Q8IZC6 1860 aaPredicted RBP16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 PCNX2A6NKB5 2137 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 ISM1B1AKI9 464 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 CCNT2O60583 730 aaKnown RBP16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 CCNDBP1O95273 360 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 NPPBP16860 134 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 PSMB5P28074 263 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 PIK3CGP48736 1102 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 CCL7P80098 99 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 ABATP80404 500 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 CFHR1Q03591 330 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 PDK4Q16654 411 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 AMZ1Q400G9 498 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 THEMIS2Q5TEJ8 643 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 CARFQ8N187 725 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 ARFGAP2Q8N6H7 521 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 ZNF483Q8TF39 744 aaPredicted RBP16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 NCSTNQ92542 709 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 ZDHHC12Q96GR4 267 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 PITPNM3Q9BZ71 974 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 ABCG4Q9H172 646 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 GPRC5BQ9NZH0 403 aa16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 CDV3Q9UKY7 258 aaKnown RBP16.37■□□□□ 0.21
PRKCSH-203ENST00000586486 SNRNP200O75643 2136 aaKnown RBP16.36■□□□□ 0.21
PRKCSH-203ENST00000586486 LRRC14BA6NHZ5 514 aa16.36■□□□□ 0.21
PRKCSH-203ENST00000586486 CAPN5O15484 640 aaPredicted RBP16.36■□□□□ 0.21
PRKCSH-203ENST00000586486 DKK1O94907 266 aa16.36■□□□□ 0.21
PRKCSH-203ENST00000586486 CDK4P11802 303 aa16.36■□□□□ 0.21
PRKCSH-203ENST00000586486 PRDX3P30048 256 aaKnown RBP16.36■□□□□ 0.21
PRKCSH-203ENST00000586486 PPP1CAP62136 330 aa16.36■□□□□ 0.21
PRKCSH-203ENST00000586486 E2F1Q01094 437 aa16.36■□□□□ 0.21
PRKCSH-203ENST00000586486 PRDX1Q06830 199 aaKnown RBP16.36■□□□□ 0.21
PRKCSH-203ENST00000586486 CDC16Q13042 620 aa16.36■□□□□ 0.21
PRKCSH-203ENST00000586486 TSTA3Q13630 321 aaPredicted RBP16.36■□□□□ 0.21
PRKCSH-203ENST00000586486 ICE2Q659A1 982 aa16.36■□□□□ 0.21
PRKCSH-203ENST00000586486 TMEM71Q6P5X7 295 aa16.36■□□□□ 0.21
PRKCSH-203ENST00000586486 NUDCD3Q8IVD9 361 aa16.36■□□□□ 0.21
PRKCSH-203ENST00000586486 OR2L3Q8NG85 312 aa16.36■□□□□ 0.21
PRKCSH-203ENST00000586486 MDM1Q8TC05 714 aa16.36■□□□□ 0.21
PRKCSH-203ENST00000586486 MGARPQ8TDB4 240 aa16.36■□□□□ 0.21
PRKCSH-203ENST00000586486 CAPS2Q9BXY5 557 aa16.36■□□□□ 0.21
PRKCSH-203ENST00000586486 MLXIPLQ9NP71 852 aa16.36■□□□□ 0.21
PRKCSH-203ENST00000586486 KLK4Q9Y5K2 254 aa16.36■□□□□ 0.21
PRKCSH-203ENST00000586486 KCNE2Q9Y6J6 123 aa16.36■□□□□ 0.21
PRKCSH-203ENST00000586486 DMXL1Q9Y485 3027 aa16.36■□□□□ 0.21
PRKCSH-203ENST00000586486 UNC13CQ8NB66 2214 aa16.35■□□□□ 0.21
PRKCSH-203ENST00000586486 TLCD2A6NGC4 264 aa16.35■□□□□ 0.21
PRKCSH-203ENST00000586486 D6RAR5 112 aa16.35■□□□□ 0.21
PRKCSH-203ENST00000586486 CASC3O15234 703 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms