RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 ZSCAN32Q9NX65 697 aa19.81■□□□□ 0.76
ATG4D-204ENST00000586417 ZNHIT2Q9UHR6 403 aa19.81■□□□□ 0.76
ATG4D-204ENST00000586417 HS3ST3A1Q9Y663 406 aa19.81■□□□□ 0.76
ATG4D-204ENST00000586417 KLHL33A6NCF5 533 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 FBP2O00757 339 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 ULK1O75385 1050 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 WFS1O76024 890 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 SNRPB2P08579 225 aaKnown RBP19.8■□□□□ 0.76
ATG4D-204ENST00000586417 PCDH1Q08174 1060 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 CPSF6Q16630 551 aaKnown RBP eCLIP19.8■□□□□ 0.76
ATG4D-204ENST00000586417 PLK5Q496M5 336 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 PACS2Q86VP3 889 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 HOMEZQ8IX15 550 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 DEFB107AQ8IZN7 70 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 DSELQ8IZU8 1212 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 ZBTB44Q8NCP5 570 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 OR13H1Q8NG92 308 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 OR9A1PQ8NGU1 263 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 RMI1Q9H9A7 625 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 ZNF490Q9ULM2 529 aaPredicted RBP19.8■□□□□ 0.76
ATG4D-204ENST00000586417 TNRC6BQ9UPQ9 1833 aaKnown RBP19.8■□□□□ 0.76
ATG4D-204ENST00000586417 PRR19A6NJB7 356 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 GALR2O43603 387 aaPredicted RBP19.8■□□□□ 0.76
ATG4D-204ENST00000586417 NME5P56597 212 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 GRIK2Q13002 908 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 NR6A1Q15406 480 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 WASHC2DQ5SRD0 308 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 PMS2CLQ68D20 193 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 PGM2L1Q6PCE3 622 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 Q6ZSR6 202 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 ABI3BPQ7Z7G0 1075 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 LRRC56Q8IYG6 542 aaPredicted RBP19.8■□□□□ 0.76
ATG4D-204ENST00000586417 RGL4Q8IZJ4 473 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 FNDC5Q8NAU1 212 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 MED8Q96G25 268 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 NPAS2Q99743 824 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 TIMM29Q9BSF4 260 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 C1orf50Q9BV19 199 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 SLC25A23Q9BV35 468 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 CAAP1Q9H8G2 361 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 EFCAB1Q9HAE3 211 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 AASDHPPTQ9NRN7 309 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 SLC7A8Q9UHI5 535 aa19.8■□□□□ 0.76
ATG4D-204ENST00000586417 CACNA1HO95180 2353 aa19.79■□□□□ 0.76
ATG4D-204ENST00000586417 SLC28A1O00337 649 aa19.79■□□□□ 0.76
ATG4D-204ENST00000586417 UGDHO60701 494 aa19.79■□□□□ 0.76
ATG4D-204ENST00000586417 KRT6AP02538 564 aa19.79■□□□□ 0.76
ATG4D-204ENST00000586417 KRT6BP04259 564 aa19.79■□□□□ 0.76
ATG4D-204ENST00000586417 HOXC4P09017 264 aaPredicted RBP19.79■□□□□ 0.76
ATG4D-204ENST00000586417 CD22P20273 847 aa19.79■□□□□ 0.76
ATG4D-204ENST00000586417 NUDT1P36639 197 aa19.79■□□□□ 0.76
ATG4D-204ENST00000586417 KRT6CP48668 564 aa19.79■□□□□ 0.76
ATG4D-204ENST00000586417 DHPSP49366 369 aaPredicted RBP19.79■□□□□ 0.76
ATG4D-204ENST00000586417 EMX2Q04743 252 aa19.79■□□□□ 0.76
ATG4D-204ENST00000586417 STX5Q13190 355 aa19.79■□□□□ 0.76
ATG4D-204ENST00000586417 CHIT1Q13231 466 aa19.79■□□□□ 0.76
ATG4D-204ENST00000586417 ZRSR2Q15696 482 aaKnown RBP19.79■□□□□ 0.76
ATG4D-204ENST00000586417 CHST15Q7LFX5 561 aaPredicted RBP19.79■□□□□ 0.76
ATG4D-204ENST00000586417 SLC22A18ASQ8N1D0 253 aa19.79■□□□□ 0.76
ATG4D-204ENST00000586417 WDR60Q8WVS4 1066 aa19.79■□□□□ 0.76
ATG4D-204ENST00000586417 DNASE2BQ8WZ79 361 aa19.79■□□□□ 0.76
ATG4D-204ENST00000586417 TFGQ92734 400 aaPredicted RBP19.79■□□□□ 0.76
ATG4D-204ENST00000586417 SCARF2Q96GP6 870 aaPredicted RBP19.79■□□□□ 0.76
ATG4D-204ENST00000586417 SLC45A3Q96JT2 553 aa19.79■□□□□ 0.76
ATG4D-204ENST00000586417 PSMD13Q9UNM6 376 aa19.79■□□□□ 0.76
ATG4D-204ENST00000586417 ASF1AQ9Y294 204 aa19.79■□□□□ 0.76
ATG4D-204ENST00000586417 E7EQ34 232 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 CACNB4O00305 520 aaPredicted RBP19.78■□□□□ 0.76
ATG4D-204ENST00000586417 RGS14O43566 566 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 PDYNP01213 254 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 WNT1P04628 370 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 ACP5P13686 325 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 JUPP14923 745 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 ZFP36L2P47974 494 aaKnown RBP19.78■□□□□ 0.76
ATG4D-204ENST00000586417 TBPL1P62380 186 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 HMGCS1Q01581 520 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 AP5B1Q2VPB7 878 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 RFTN2Q52LD8 501 aaPredicted RBP19.78■□□□□ 0.76
ATG4D-204ENST00000586417 PDCD4Q53EL6 469 aaKnown RBP19.78■□□□□ 0.76
ATG4D-204ENST00000586417 PYCR3Q53H96 274 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 SGO1Q5FBB7 561 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 LIPJQ5W064 366 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 REP15Q6BDI9 236 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 C16orf89Q6UX73 402 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 OR5AR1Q8NGP9 310 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 TEX37Q96LM6 180 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 MAGEB10Q96LZ2 347 aaPredicted RBP19.78■□□□□ 0.76
ATG4D-204ENST00000586417 PPP3R2Q96LZ3 170 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 SGPP1Q9BX95 441 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 TM9SF3Q9HD45 589 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 SLC52A3Q9NQ40 469 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 MRPL40Q9NQ50 206 aaKnown RBP19.78■□□□□ 0.76
ATG4D-204ENST00000586417 BAIAP2L1Q9UHR4 511 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 PNMA8BQ9ULN7 279 aaPredicted RBP19.78■□□□□ 0.76
ATG4D-204ENST00000586417 SUFUQ9UMX1 484 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 HALP42357 657 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 KIAA1024LP59773 190 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 IRF8Q02556 426 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 TBL3Q12788 808 aaKnown RBP19.78■□□□□ 0.76
ATG4D-204ENST00000586417 E2F2Q14209 437 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms