RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 C9P02748 559 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 SBK3P0C264 359 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 HOXB3P14651 431 aaPredicted RBP13.15□□□□□ -0.3
VMP1-203ENST00000586245 CPA3P15088 417 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 UGT2B7P16662 529 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 CDH3P22223 829 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 CMPK1P30085 196 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 PEBP1P30086 187 aaKnown RBP13.15□□□□□ -0.3
VMP1-203ENST00000586245 GGT5P36269 586 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 INSM1Q01101 510 aaPredicted RBP13.15□□□□□ -0.3
VMP1-203ENST00000586245 CFHR1Q03591 330 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 GPS2Q13227 327 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 SETDB1Q15047 1291 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 SLC5A12Q1EHB4 618 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 C18orf21Q32NC0 220 aaPredicted RBP13.15□□□□□ -0.3
VMP1-203ENST00000586245 HSP90B2PQ58FF3 399 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 TTMPQ5BVD1 217 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 FBXO48Q5FWF7 155 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 SNAP47Q5SQN1 464 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 ZYG11AQ6WRX3 759 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 FAM92BQ6ZTR7 304 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 THOC6Q86W42 341 aaKnown RBP13.15□□□□□ -0.3
VMP1-203ENST00000586245 SLC22A9Q8IVM8 553 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 KLHDC8AQ8IYD2 350 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 LRRC56Q8IYG6 542 aaPredicted RBP13.15□□□□□ -0.3
VMP1-203ENST00000586245 CARFQ8N187 725 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 TMEM151AQ8N4L1 468 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 PTGR2Q8N8N7 351 aaPredicted RBP13.15□□□□□ -0.3
VMP1-203ENST00000586245 ARMC2Q8NEN0 867 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 CCDC126Q96EE4 140 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 TMEM74Q96NL1 305 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 FAM111AQ96PZ2 611 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 OR2A14Q96R47 310 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 TMEM79Q9BSE2 394 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 HAUS8Q9BT25 410 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 SGPP1Q9BX95 441 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 CD244Q9BZW8 370 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 TWSG1Q9GZX9 223 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 C12orf65Q9H3J6 166 aaKnown RBP13.15□□□□□ -0.3
VMP1-203ENST00000586245 C1GALT1Q9NS00 363 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 TMEM9Q9P0T7 183 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 SLC17A7Q9P2U7 560 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 OPTCQ9UBM4 332 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 TAC3Q9UHF0 121 aa13.15□□□□□ -0.3
VMP1-203ENST00000586245 A0A0J9YY10 115 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 TLCD2A6NGC4 264 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 STX16-NPEPL1H3BU86 382 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 K7EPI3 171 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 STX16O14662 325 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 PRICKLE3O43900 615 aaPredicted RBP13.14□□□□□ -0.31
VMP1-203ENST00000586245 DKK1O94907 266 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 ZWINTO95229 277 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 MT-CO3P00414 261 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 MPSTP25325 297 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 PSMB5P28074 263 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 EEF1DP29692 281 aaKnown RBP13.14□□□□□ -0.31
VMP1-203ENST00000586245 GDF5P43026 501 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 SLC6A12P48065 614 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 INHBCP55103 352 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 PPP1CAP62136 330 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 ABATP80404 500 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 NFKB2Q00653 900 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 TRA2AQ13595 282 aaKnown RBP eCLIP13.14□□□□□ -0.31
VMP1-203ENST00000586245 PUM1Q14671 1186 aaKnown RBP eCLIP13.14□□□□□ -0.31
VMP1-203ENST00000586245 NAA25Q14CX7 972 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 PHF19Q5T6S3 580 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 CACHD1Q5VU97 1274 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 ICE2Q659A1 982 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 LCTLQ6UWM7 567 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 LRRC70Q7Z2Q7 622 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 TMPRSS9Q7Z410 1059 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 TRIM73Q86UV7 250 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 C17orf64Q86WR6 236 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 SNX31Q8N9S9 440 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 OR2A1Q8NGT9 310 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 UBTD2Q8WUN7 234 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 SREK1Q8WXA9 508 aaKnown RBP13.14□□□□□ -0.31
VMP1-203ENST00000586245 DEPDC7Q96QD5 511 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 MAP3K3Q99759 626 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 SELENOSQ9BQE4 189 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 CAPS2Q9BXY5 557 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 MRPS30Q9NP92 439 aaKnown RBP13.14□□□□□ -0.31
VMP1-203ENST00000586245 DNAJC11Q9NVH1 559 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 INTS7Q9NVH2 962 aaKnown RBP13.14□□□□□ -0.31
VMP1-203ENST00000586245 COPG2Q9UBF2 871 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 SLC22A14Q9Y267 594 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 DYRK1BQ9Y463 629 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 ANGPTL3Q9Y5C1 460 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 KCNE2Q9Y6J6 123 aa13.14□□□□□ -0.31
VMP1-203ENST00000586245 ASXL3Q9C0F0 2248 aa13.13□□□□□ -0.31
VMP1-203ENST00000586245 RP1P56715 2156 aa13.13□□□□□ -0.31
VMP1-203ENST00000586245 IGHV5-10-1A0A0J9YXX1 117 aa13.13□□□□□ -0.31
VMP1-203ENST00000586245 TMEM120BA0PK00 339 aa13.13□□□□□ -0.31
VMP1-203ENST00000586245 A8MU76 341 aa13.13□□□□□ -0.31
VMP1-203ENST00000586245 G3V2L1 256 aa13.13□□□□□ -0.31
VMP1-203ENST00000586245 TMX2-CTNND1H3BSU7 103 aa13.13□□□□□ -0.31
VMP1-203ENST00000586245 TOX3O15405 576 aaPredicted RBP13.13□□□□□ -0.31
VMP1-203ENST00000586245 MAP3K7O43318 606 aa13.13□□□□□ -0.31
VMP1-203ENST00000586245 DLX3O60479 287 aa13.13□□□□□ -0.31
VMP1-203ENST00000586245 ARL4DP49703 201 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms