RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 TRIOBPQ9H2D6 2365 aa10.99□□□□□ -0.65
TOP3A-217ENST00000584582 SMIM31A0A1B0GVY4 71 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 TRIM43BA6NCK2 446 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 ANTXRLA6NF34 631 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 GLOD5A6NK44 160 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 SOCS5O75159 536 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 CEBPBP17676 345 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 PTNP21246 168 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 FMO3P31513 532 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 GALNT1Q10472 559 aaPredicted RBP10.98□□□□□ -0.65
TOP3A-217ENST00000584582 ATP1A4Q13733 1029 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 DOC2AQ14183 400 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 CATSPEREQ5SY80 951 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 TNFAIP8L2Q6P589 184 aaPredicted RBP10.98□□□□□ -0.65
TOP3A-217ENST00000584582 MINDY1Q8N5J2 469 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 TMEM102Q8N9M5 508 aaPredicted RBP10.98□□□□□ -0.65
TOP3A-217ENST00000584582 OR2A12Q8NGT7 310 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 DOK4Q8TEW6 326 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 EXOSC8Q96B26 276 aaKnown RBP10.98□□□□□ -0.65
TOP3A-217ENST00000584582 TRIM43Q96BQ3 446 aaPredicted RBP10.98□□□□□ -0.65
TOP3A-217ENST00000584582 MYRFLQ96LU7 910 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 XKR8Q9H6D3 395 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 REEP1Q9H902 201 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 CXorf21Q9HAI6 301 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 IMPAD1Q9NX62 359 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 PCDHB14Q9Y5E9 798 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 TDRD15B5MCY1 1934 aaKnown RBP10.98□□□□□ -0.65
TOP3A-217ENST00000584582 LINC00854A0A1B0GVQ3 168 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 ADH1CP00326 375 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 KLK1P06870 262 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 ACP5P13686 325 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 HSPB3Q12988 150 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 SGCGQ13326 291 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 MADCAM1Q13477 382 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 NFE2L1Q14494 772 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 DHCR24Q15392 516 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 USP39Q53GS9 565 aaKnown RBP10.98□□□□□ -0.65
TOP3A-217ENST00000584582 OGFOD2Q6N063 350 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 HMBOX1Q6NT76 420 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 GPR153Q6NV75 609 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 NOXRED1Q6NXP6 359 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 KCTD8Q6ZWB6 473 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 PROSER1Q86XN7 944 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 ADGRG5Q8IZF4 528 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 OR14C36Q8NHC7 312 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 VANGL1Q8TAA9 524 aaPredicted RBP10.98□□□□□ -0.65
TOP3A-217ENST00000584582 AASDHPPTQ9NRN7 309 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.98□□□□□ -0.65
TOP3A-217ENST00000584582 TBC1D3DA0A087WVF3 549 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 TBC1D3IA0A087WXS9 549 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 TBC1D3EA0A087X179 549 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 TBC1D3KA0A087X1G2 549 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 TBC1D3FA6NER0 549 aaPredicted RBP10.98□□□□□ -0.65
TOP3A-217ENST00000584582 TBC1D3LB9A6J9 549 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 SLC9A3R1O14745 358 aaPredicted RBP10.98□□□□□ -0.65
TOP3A-217ENST00000584582 LSM1O15116 133 aaKnown RBP10.98□□□□□ -0.65
TOP3A-217ENST00000584582 XPNPEP2O43895 674 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 TBC1D3HP0C7X1 549 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 TIE1P35590 1138 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 ACVR1Q04771 509 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 CNTN1Q12860 1018 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 MAPK11Q15759 364 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 TBC1D3GQ6DHY5 549 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 TBC1D3CQ6IPX1 549 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 CAPN13Q6MZZ7 669 aaPredicted RBP10.98□□□□□ -0.65
TOP3A-217ENST00000584582 TBC1D3Q8IZP1 549 aaPredicted RBP10.98□□□□□ -0.65
TOP3A-217ENST00000584582 SORBS1Q9BX66 1292 aaKnown RBP10.98□□□□□ -0.65
TOP3A-217ENST00000584582 NDUFA13Q9P0J0 144 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 SLC13A4Q9UKG4 626 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 CDC14AQ9UNH5 594 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 KCNK6Q9Y257 313 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 CABIN1Q9Y6J0 2220 aa10.98□□□□□ -0.65
TOP3A-217ENST00000584582 M0R3G1 203 aa10.97□□□□□ -0.65
TOP3A-217ENST00000584582 FXYD1O00168 92 aa10.97□□□□□ -0.65
TOP3A-217ENST00000584582 NRG2O14511 850 aaPredicted RBP10.97□□□□□ -0.65
TOP3A-217ENST00000584582 MITFO75030 526 aaPredicted RBP10.97□□□□□ -0.65
TOP3A-217ENST00000584582 CREG1O75629 220 aa10.97□□□□□ -0.65
TOP3A-217ENST00000584582 TRMUO75648 421 aaKnown RBP10.97□□□□□ -0.65
TOP3A-217ENST00000584582 EIF2S1P05198 315 aaKnown RBP10.97□□□□□ -0.65
TOP3A-217ENST00000584582 IL6P05231 212 aa10.97□□□□□ -0.65
TOP3A-217ENST00000584582 TFAP2AP05549 437 aa10.97□□□□□ -0.65
TOP3A-217ENST00000584582 CA3P07451 260 aa10.97□□□□□ -0.65
TOP3A-217ENST00000584582 EBLN1P0CF75 366 aa10.97□□□□□ -0.65
TOP3A-217ENST00000584582 FUT4P22083 530 aa10.97□□□□□ -0.65
TOP3A-217ENST00000584582 VIPR1P32241 457 aa10.97□□□□□ -0.65
TOP3A-217ENST00000584582 CLK1P49759 484 aaKnown RBP10.97□□□□□ -0.65
TOP3A-217ENST00000584582 GANABQ14697 944 aaKnown RBP10.97□□□□□ -0.65
TOP3A-217ENST00000584582 FRS2Q8WU20 508 aa10.97□□□□□ -0.65
TOP3A-217ENST00000584582 SLCO4A1Q96BD0 722 aa10.97□□□□□ -0.65
TOP3A-217ENST00000584582 MACROD1Q9BQ69 325 aa10.97□□□□□ -0.65
TOP3A-217ENST00000584582 YIPF4Q9BSR8 244 aa10.97□□□□□ -0.65
TOP3A-217ENST00000584582 MCMBPQ9BTE3 642 aa10.97□□□□□ -0.65
TOP3A-217ENST00000584582 EQTNQ9NQ60 294 aa10.97□□□□□ -0.65
TOP3A-217ENST00000584582 RHCGQ9UBD6 479 aa10.97□□□□□ -0.65
TOP3A-217ENST00000584582 GMPPBQ9Y5P6 360 aa10.97□□□□□ -0.65
TOP3A-217ENST00000584582 A0A0G2JMZ2 1700 aa10.97□□□□□ -0.65
TOP3A-217ENST00000584582 TMEM247A6NEH6 219 aa10.97□□□□□ -0.65
TOP3A-217ENST00000584582 TTC36A6NLP5 189 aa10.97□□□□□ -0.65
TOP3A-217ENST00000584582 FAM20BO75063 409 aa10.97□□□□□ -0.65
TOP3A-217ENST00000584582 CHRM5P08912 532 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms