RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 OR2L3Q8NG85 312 aa19.62■□□□□ 0.73
SS18-224ENST00000584083 OR2A1Q8NGT9 310 aa19.62■□□□□ 0.73
SS18-224ENST00000584083 ASB11Q8WXH4 323 aa19.62■□□□□ 0.73
SS18-224ENST00000584083 SMPDL3AQ92484 453 aa19.62■□□□□ 0.73
SS18-224ENST00000584083 PKP4Q99569 1192 aa19.62■□□□□ 0.73
SS18-224ENST00000584083 ACAT2Q9BWD1 397 aa19.62■□□□□ 0.73
SS18-224ENST00000584083 TAS2R13Q9NYV9 303 aa19.62■□□□□ 0.73
SS18-224ENST00000584083 DHCR7Q9UBM7 475 aaKnown RBP19.62■□□□□ 0.73
SS18-224ENST00000584083 SNX24Q9Y343 169 aa19.62■□□□□ 0.73
SS18-224ENST00000584083 TEX264Q9Y6I9 313 aa19.62■□□□□ 0.73
SS18-224ENST00000584083 TARM1B6A8C7 271 aa19.61■□□□□ 0.73
SS18-224ENST00000584083 ZBTB14O43829 449 aa19.61■□□□□ 0.73
SS18-224ENST00000584083 AHSGP02765 367 aa19.61■□□□□ 0.73
SS18-224ENST00000584083 CMPK1P30085 196 aa19.61■□□□□ 0.73
SS18-224ENST00000584083 RPA3P35244 121 aaPredicted RBP19.61■□□□□ 0.73
SS18-224ENST00000584083 HSD17B2P37059 387 aa19.61■□□□□ 0.73
SS18-224ENST00000584083 RPL21P46778 160 aaKnown RBP19.61■□□□□ 0.73
SS18-224ENST00000584083 PNLIPRP1P54315 467 aa19.61■□□□□ 0.73
SS18-224ENST00000584083 ETF1P62495 437 aaKnown RBP19.61■□□□□ 0.73
SS18-224ENST00000584083 IL10RAQ13651 578 aa19.61■□□□□ 0.73
SS18-224ENST00000584083 ARHGAP19Q14CB8 494 aa19.61■□□□□ 0.73
SS18-224ENST00000584083 NCF4Q15080 339 aa19.61■□□□□ 0.73
SS18-224ENST00000584083 MLIPQ5VWP3 458 aa19.61■□□□□ 0.73
SS18-224ENST00000584083 SUSD1Q6UWL2 747 aa19.61■□□□□ 0.73
SS18-224ENST00000584083 SYT10Q6XYQ8 523 aa19.61■□□□□ 0.73
SS18-224ENST00000584083 KIAA0408Q6ZU52 694 aa19.61■□□□□ 0.73
SS18-224ENST00000584083 C9orf43Q8TAL5 461 aaPredicted RBP19.61■□□□□ 0.73
SS18-224ENST00000584083 PROKR1Q8TCW9 393 aa19.61■□□□□ 0.73
SS18-224ENST00000584083 THAP4Q8WY91 577 aa19.61■□□□□ 0.73
SS18-224ENST00000584083 C17orf62Q9BQA9 187 aa19.61■□□□□ 0.73
SS18-224ENST00000584083 GPN3Q9UHW5 284 aaPredicted RBP19.61■□□□□ 0.73
SS18-224ENST00000584083 TCFL5Q9UL49 500 aa19.61■□□□□ 0.73
SS18-224ENST00000584083 BOD1L1Q8NFC6 3051 aa19.6■□□□□ 0.73
SS18-224ENST00000584083 ZNF462Q96JM2 2506 aa19.6■□□□□ 0.73
SS18-224ENST00000584083 HEATR5BQ9P2D3 2071 aa19.6■□□□□ 0.73
SS18-224ENST00000584083 A0A1W2PPV9 198 aa19.6■□□□□ 0.73
SS18-224ENST00000584083 ZNF839A8K0R7 811 aa19.6■□□□□ 0.73
SS18-224ENST00000584083 NDC80O14777 642 aa19.6■□□□□ 0.73
SS18-224ENST00000584083 CAPN1P07384 714 aa19.6■□□□□ 0.73
SS18-224ENST00000584083 ERGP11308 486 aa19.6■□□□□ 0.73
SS18-224ENST00000584083 PLA2G2AP14555 144 aa19.6■□□□□ 0.73
SS18-224ENST00000584083 ALAS2P22557 587 aa19.6■□□□□ 0.73
SS18-224ENST00000584083 GABRB3P28472 473 aa19.6■□□□□ 0.73
SS18-224ENST00000584083 SKIV2L2P42285 1042 aaKnown RBP19.6■□□□□ 0.73
SS18-224ENST00000584083 RGS4P49798 205 aa19.6■□□□□ 0.73
SS18-224ENST00000584083 DCDP81605 110 aaKnown RBP19.6■□□□□ 0.73
SS18-224ENST00000584083 NFKB2Q00653 900 aa19.6■□□□□ 0.73
SS18-224ENST00000584083 PDIA2Q13087 525 aaKnown RBP19.6■□□□□ 0.73
SS18-224ENST00000584083 TEDDM1Q5T9Z0 273 aa19.6■□□□□ 0.73
SS18-224ENST00000584083 FAM69BQ5VUD6 431 aa19.6■□□□□ 0.73
SS18-224ENST00000584083 ZNF385CQ66K41 422 aaPredicted RBP19.6■□□□□ 0.73
SS18-224ENST00000584083 TRMT10BQ6PF06 316 aaKnown RBP19.6■□□□□ 0.73
SS18-224ENST00000584083 CYHR1Q6ZMK1 362 aa19.6■□□□□ 0.73
SS18-224ENST00000584083 UBE2R2Q712K3 238 aaPredicted RBP19.6■□□□□ 0.73
SS18-224ENST00000584083 PRICKLE2Q7Z3G6 844 aa19.6■□□□□ 0.73
SS18-224ENST00000584083 PIWIL4Q7Z3Z4 852 aaKnown RBP19.6■□□□□ 0.73
SS18-224ENST00000584083 CNTN4Q8IWV2 1026 aa19.6■□□□□ 0.73
SS18-224ENST00000584083 BBOF1Q8ND07 529 aa19.6■□□□□ 0.73
SS18-224ENST00000584083 SPATA4Q8NEY3 305 aa19.6■□□□□ 0.73
SS18-224ENST00000584083 DLG3Q92796 817 aa19.6■□□□□ 0.73
SS18-224ENST00000584083 SELENOSQ9BQE4 189 aa19.6■□□□□ 0.73
SS18-224ENST00000584083 PLAC1Q9HBJ0 212 aa19.6■□□□□ 0.73
SS18-224ENST00000584083 ABCF3Q9NUQ8 709 aa19.6■□□□□ 0.73
SS18-224ENST00000584083 SLC17A6Q9P2U8 582 aa19.6■□□□□ 0.73
SS18-224ENST00000584083 PADI2Q9Y2J8 665 aa19.6■□□□□ 0.73
SS18-224ENST00000584083 TLN1Q9Y490 2541 aaKnown RBP19.6■□□□□ 0.73
SS18-224ENST00000584083 FAM187AA6NFU0 413 aa19.59■□□□□ 0.73
SS18-224ENST00000584083 GFYI3L273 518 aa19.59■□□□□ 0.73
SS18-224ENST00000584083 EIF3FO00303 357 aaPredicted RBP19.59■□□□□ 0.73
SS18-224ENST00000584083 SLC28A2O43868 658 aa19.59■□□□□ 0.73
SS18-224ENST00000584083 SLC16A8O95907 504 aa19.59■□□□□ 0.73
SS18-224ENST00000584083 PMS2P54278 862 aa19.59■□□□□ 0.73
SS18-224ENST00000584083 ARSFP54793 590 aa19.59■□□□□ 0.73
SS18-224ENST00000584083 C2orf54Q08AI8 447 aa19.59■□□□□ 0.73
SS18-224ENST00000584083 NAA25Q14CX7 972 aa19.59■□□□□ 0.73
SS18-224ENST00000584083 TCTE1Q5JU00 501 aa19.59■□□□□ 0.73
SS18-224ENST00000584083 RBM20Q5T481 1227 aaKnown RBP19.59■□□□□ 0.73
SS18-224ENST00000584083 STEAP4Q687X5 459 aa19.59■□□□□ 0.73
SS18-224ENST00000584083 LRRC8EQ6NSJ5 796 aa19.59■□□□□ 0.73
SS18-224ENST00000584083 MAATS1Q7Z4T9 603 aa19.59■□□□□ 0.73
SS18-224ENST00000584083 FBXO15Q8NCQ5 510 aaPredicted RBP19.59■□□□□ 0.73
SS18-224ENST00000584083 ABHD17AQ96GS6 310 aa19.59■□□□□ 0.73
SS18-224ENST00000584083 GBP5Q96PP8 586 aa19.59■□□□□ 0.73
SS18-224ENST00000584083 WDR83Q9BRX9 315 aaKnown RBP19.59■□□□□ 0.73
SS18-224ENST00000584083 DPH7Q9BTV6 452 aa19.59■□□□□ 0.73
SS18-224ENST00000584083 DPH5Q9H2P9 285 aa19.59■□□□□ 0.73
SS18-224ENST00000584083 MRPS30Q9NP92 439 aaKnown RBP19.59■□□□□ 0.73
SS18-224ENST00000584083 ZNF71Q9NQZ8 489 aaPredicted RBP19.59■□□□□ 0.73
SS18-224ENST00000584083 IFT80Q9P2H3 777 aaPredicted RBP19.59■□□□□ 0.73
SS18-224ENST00000584083 NDOR1Q9UHB4 597 aa19.59■□□□□ 0.73
SS18-224ENST00000584083 BAHCC1Q9P281 2608 aa19.59■□□□□ 0.73
SS18-224ENST00000584083 SPTA1P02549 2419 aa19.59■□□□□ 0.73
SS18-224ENST00000584083 MKRN2OSH3BPM6 223 aa19.58■□□□□ 0.72
SS18-224ENST00000584083 TP73O15350 636 aa19.58■□□□□ 0.72
SS18-224ENST00000584083 CTSVO60911 334 aa19.58■□□□□ 0.72
SS18-224ENST00000584083 RFPL1O75677 317 aa19.58■□□□□ 0.72
SS18-224ENST00000584083 CDKN2DP55273 166 aa19.58■□□□□ 0.72
SS18-224ENST00000584083 VSX2P58304 361 aaPredicted RBP19.58■□□□□ 0.72
SS18-224ENST00000584083 YBX1P67809 324 aaKnown RBP19.58■□□□□ 0.72
SS18-224ENST00000584083 CALCOCO2Q13137 446 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms