RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 ERGP11308 486 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 TCN2P20062 427 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 CMPK1P30085 196 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 STX2P32856 288 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 GRIA3P42263 894 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 SLC12A2P55011 1212 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 GPX6P59796 221 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 CYP4F2P78329 520 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 RHDQ02161 417 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 GPS2Q13227 327 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 SP140Q13342 867 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 THEMIS2Q5TEJ8 643 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 FCRL6Q6DN72 434 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 DNAJC22Q8N4W6 341 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 OR2A1Q8NGT9 310 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 MCOLN3Q8TDD5 553 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 CT55Q8WUE5 264 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 ZNF480Q8WV37 535 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 IFT81Q8WYA0 676 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 SEC14L1Q92503 715 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 MR1Q95460 341 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 VPS39Q96JC1 886 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 SLC45A3Q96JT2 553 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 UBL7Q96S82 380 aaPredicted RBP12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 CHRNA10Q9GZZ6 450 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 LRRC4CQ9HCJ2 640 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 ZDHHC18Q9NUE0 388 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 TAC3Q9UHF0 121 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 IL17BQ9UHF5 180 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 DMGDHQ9UI17 866 aaKnown RBP12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 PLCL2Q9UPR0 1127 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 MRPS18BQ9Y676 258 aaKnown RBP12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 FAM208BQ5VWN6 2430 aa12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 ZFYVE26Q68DK2 2539 aa12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 FAM159BA6NKW6 160 aa12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 ZNF891A8MT65 544 aaPredicted RBP12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 SLC16A5O15375 505 aa12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 ZSCAN9O15535 394 aaPredicted RBP12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 KLK3P07288 261 aaPredicted RBP12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 HIST1H2AGP0C0S8 130 aaPredicted RBP12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 PRKAR1AP10644 381 aa12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 HIST1H2ADP20671 130 aa12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 F8A1P23610 371 aa12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 IMPA1P29218 277 aa12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 GP5P40197 560 aa12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 GABRA4P48169 554 aa12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 TAS2R39P59534 338 aa12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 ILF2Q12905 390 aaKnown RBP12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 DNASE1L3Q13609 305 aa12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 COL9A2Q14055 689 aaPredicted RBP12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 ZNF460Q14592 562 aa12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 GLE1Q53GS7 698 aaKnown RBP12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 TAF1BQ53T94 588 aaPredicted RBP12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 ZC3H12BQ5HYM0 836 aaKnown RBP12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 FAM199XQ6PEV8 388 aaPredicted RBP12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 MBOAT1Q6ZNC8 495 aa12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 CEP128Q6ZU80 1094 aa12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 MCATQ8IVS2 390 aaKnown RBP12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 PPM1NQ8N819 430 aa12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 SLC38A9Q8NBW4 561 aa12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 FBF1Q8TES7 1133 aa12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 STARD8Q92502 1023 aa12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 DLG3Q92796 817 aa12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 ZUFSPQ96AP4 578 aa12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 HIST1H2AHQ96KK5 128 aa12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 CPNE1Q99829 537 aa12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 HIST1H2AJQ99878 128 aa12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 H2AFJQ9BTM1 129 aa12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 SLC12A9Q9BXP2 914 aa12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 SPRTNQ9H040 489 aaPredicted RBP12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 AKIRIN1Q9H9L7 192 aaPredicted RBP12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 PARVBQ9HBI1 364 aa12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 MRPS30Q9NP92 439 aaKnown RBP12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 EURLQ9NYK6 297 aa12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 PDE10AQ9Y233 779 aa12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 AP1M2Q9Y6Q5 423 aa12.11□□□□□ -0.47
SMARCE1-218ENST00000582955 NBEAQ8NFP9 2946 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 CHD6Q8TD26 2715 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 TARM1B6A8C7 271 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 E7ENX8 843 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 MEN1O00255 615 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 CCNDBP1O95273 360 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 TSPAN12O95859 305 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 CTSBP07858 339 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 HBQ1P09105 142 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 ZNF37AP17032 561 aaPredicted RBP12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 YBX1P67809 324 aaKnown RBP12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 TAP2Q03519 686 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 NAA25Q14CX7 972 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 PHKG1Q16816 387 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 PTCHD3Q3KNS1 767 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 KBTBD12Q3ZCT8 623 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 ICE2Q659A1 982 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 C16orf46Q6P387 395 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 CYS1Q717R9 158 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 DSELQ8IZU8 1212 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 NKAPQ8N5F7 415 aaKnown RBP12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 ZNF655Q8N720 491 aaPredicted RBP12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 ALKBH8Q96BT7 664 aaKnown RBP12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 MED8Q96G25 268 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms