RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 TFF2Q03403 129 aa21.98■■□□□ 1.11
CCDC47-204ENST00000582252 MAPKAPK3Q16644 382 aa21.98■■□□□ 1.11
CCDC47-204ENST00000582252 PIP5KL1Q5T9C9 394 aa21.98■■□□□ 1.11
CCDC47-204ENST00000582252 GRHL2Q6ISB3 625 aa21.98■■□□□ 1.11
CCDC47-204ENST00000582252 TRIM74Q86UV6 250 aa21.98■■□□□ 1.11
CCDC47-204ENST00000582252 KIAA2013Q8IYS2 634 aa21.98■■□□□ 1.11
CCDC47-204ENST00000582252 OR8J3Q8NGG0 315 aa21.98■■□□□ 1.11
CCDC47-204ENST00000582252 METTL2AQ96IZ6 378 aaKnown RBP21.98■■□□□ 1.11
CCDC47-204ENST00000582252 UHRF1Q96T88 793 aaPredicted RBP21.98■■□□□ 1.11
CCDC47-204ENST00000582252 PKP4Q99569 1192 aa21.98■■□□□ 1.11
CCDC47-204ENST00000582252 CGREF1Q99674 301 aa21.98■■□□□ 1.11
CCDC47-204ENST00000582252 SH3GL1Q99961 368 aa21.98■■□□□ 1.11
CCDC47-204ENST00000582252 SLC2A4RGQ9NR83 387 aa21.98■■□□□ 1.11
CCDC47-204ENST00000582252 INTS7Q9NVH2 962 aaKnown RBP21.98■■□□□ 1.11
CCDC47-204ENST00000582252 ARPC2O15144 300 aa21.97■■□□□ 1.11
CCDC47-204ENST00000582252 CAPNS1P04632 268 aa21.97■■□□□ 1.11
CCDC47-204ENST00000582252 GPIP06744 558 aa21.97■■□□□ 1.11
CCDC47-204ENST00000582252 IMPA1P29218 277 aa21.97■■□□□ 1.11
CCDC47-204ENST00000582252 CLDN8P56748 225 aa21.97■■□□□ 1.11
CCDC47-204ENST00000582252 MED21Q13503 144 aa21.97■■□□□ 1.11
CCDC47-204ENST00000582252 ENPP2Q13822 863 aa21.97■■□□□ 1.11
CCDC47-204ENST00000582252 MAP7Q14244 749 aa21.97■■□□□ 1.11
CCDC47-204ENST00000582252 RABL3Q5HYI8 236 aa21.97■■□□□ 1.11
CCDC47-204ENST00000582252 CHPFQ8IZ52 775 aa21.97■■□□□ 1.11
CCDC47-204ENST00000582252 LILRA2Q8N149 483 aa21.97■■□□□ 1.11
CCDC47-204ENST00000582252 AADATQ8N5Z0 425 aa21.97■■□□□ 1.11
CCDC47-204ENST00000582252 LILRA3Q8N6C8 439 aaPredicted RBP21.97■■□□□ 1.11
CCDC47-204ENST00000582252 TMEM102Q8N9M5 508 aaPredicted RBP21.97■■□□□ 1.11
CCDC47-204ENST00000582252 OR2L2Q8NH16 312 aa21.97■■□□□ 1.11
CCDC47-204ENST00000582252 EGFL7Q9UHF1 273 aa21.97■■□□□ 1.11
CCDC47-204ENST00000582252 DHRS12A0PJE2 317 aa21.97■■□□□ 1.11
CCDC47-204ENST00000582252 ZNF839A8K0R7 811 aa21.97■■□□□ 1.11
CCDC47-204ENST00000582252 HNRNPRO43390 633 aaKnown RBP21.97■■□□□ 1.11
CCDC47-204ENST00000582252 PDHA2P29803 388 aa21.97■■□□□ 1.11
CCDC47-204ENST00000582252 DGKQP52824 942 aa21.97■■□□□ 1.11
CCDC47-204ENST00000582252 CST6Q15828 149 aa21.97■■□□□ 1.11
CCDC47-204ENST00000582252 FAM174BQ3ZCQ3 159 aa21.97■■□□□ 1.11
CCDC47-204ENST00000582252 DLEU7Q6UYE1 221 aa21.97■■□□□ 1.11
CCDC47-204ENST00000582252 TRMT11Q7Z4G4 463 aaKnown RBP21.97■■□□□ 1.11
CCDC47-204ENST00000582252 ZNF513Q8N8E2 541 aaPredicted RBP21.97■■□□□ 1.11
CCDC47-204ENST00000582252 RSPH9Q9H1X1 276 aaPredicted RBP21.97■■□□□ 1.11
CCDC47-204ENST00000582252 RMND5AQ9H871 391 aa21.97■■□□□ 1.11
CCDC47-204ENST00000582252 ITM2CQ9NQX7 267 aa21.97■■□□□ 1.11
CCDC47-204ENST00000582252 CCM2LQ9NUG4 571 aaPredicted RBP21.97■■□□□ 1.11
CCDC47-204ENST00000582252 SCOCQ9UIL1 159 aa21.97■■□□□ 1.11
CCDC47-204ENST00000582252 KCNE2Q9Y6J6 123 aa21.97■■□□□ 1.11
CCDC47-204ENST00000582252 MGAT4DA6NG13 374 aa21.96■■□□□ 1.11
CCDC47-204ENST00000582252 H0YIV9 168 aa21.96■■□□□ 1.11
CCDC47-204ENST00000582252 POP7O75817 140 aaKnown RBP21.96■■□□□ 1.11
CCDC47-204ENST00000582252 SLC16A8O95907 504 aa21.96■■□□□ 1.11
CCDC47-204ENST00000582252 PGRP06401 933 aa21.96■■□□□ 1.11
CCDC47-204ENST00000582252 UMPSP11172 480 aa21.96■■□□□ 1.11
CCDC47-204ENST00000582252 ZNF8P17098 575 aaPredicted RBP21.96■■□□□ 1.11
CCDC47-204ENST00000582252 DRD1P21728 446 aa21.96■■□□□ 1.11
CCDC47-204ENST00000582252 C5AR1P21730 350 aa21.96■■□□□ 1.11
CCDC47-204ENST00000582252 RPA4Q13156 261 aa21.96■■□□□ 1.11
CCDC47-204ENST00000582252 CAMK2GQ13555 558 aaPredicted RBP21.96■■□□□ 1.11
CCDC47-204ENST00000582252 TMEM196Q5HYL7 178 aa21.96■■□□□ 1.11
CCDC47-204ENST00000582252 CAPN13Q6MZZ7 669 aaPredicted RBP21.96■■□□□ 1.11
CCDC47-204ENST00000582252 SUSD1Q6UWL2 747 aa21.96■■□□□ 1.11
CCDC47-204ENST00000582252 IFNEQ86WN2 208 aa21.96■■□□□ 1.11
CCDC47-204ENST00000582252 TICAM1Q8IUC6 712 aa21.96■■□□□ 1.11
CCDC47-204ENST00000582252 TNIP2Q8NFZ5 429 aa21.96■■□□□ 1.11
CCDC47-204ENST00000582252 COX14Q96I36 57 aa21.96■■□□□ 1.11
CCDC47-204ENST00000582252 BRF2Q9HAW0 419 aa21.96■■□□□ 1.11
CCDC47-204ENST00000582252 MAGEL2Q9UJ55 1249 aa21.96■■□□□ 1.11
CCDC47-204ENST00000582252 HCN2Q9UL51 889 aa21.96■■□□□ 1.11
CCDC47-204ENST00000582252 PCDHGA11Q9Y5H2 935 aa21.96■■□□□ 1.11
CCDC47-204ENST00000582252 E7EQ34 232 aa21.95■■□□□ 1.1
CCDC47-204ENST00000582252 K7EQS6 105 aa21.95■■□□□ 1.1
CCDC47-204ENST00000582252 NARSO43776 548 aaKnown RBP21.95■■□□□ 1.1
CCDC47-204ENST00000582252 AMD1P17707 334 aa21.95■■□□□ 1.1
CCDC47-204ENST00000582252 NEK2P51955 445 aa21.95■■□□□ 1.1
CCDC47-204ENST00000582252 GRSF1Q12849 480 aaKnown RBP eCLIP21.95■■□□□ 1.1
CCDC47-204ENST00000582252 DOC2AQ14183 400 aa21.95■■□□□ 1.1
CCDC47-204ENST00000582252 PON2Q15165 354 aa21.95■■□□□ 1.1
CCDC47-204ENST00000582252 C10orf62Q5T681 223 aaPredicted RBP21.95■■□□□ 1.1
CCDC47-204ENST00000582252 PNCKQ6P2M8 343 aa21.95■■□□□ 1.1
CCDC47-204ENST00000582252 UNC5DQ6UXZ4 953 aa21.95■■□□□ 1.1
CCDC47-204ENST00000582252 MSANTD1Q6ZTZ1 278 aa21.95■■□□□ 1.1
CCDC47-204ENST00000582252 SPPL2CQ8IUH8 684 aa21.95■■□□□ 1.1
CCDC47-204ENST00000582252 EME1Q96AY2 570 aa21.95■■□□□ 1.1
CCDC47-204ENST00000582252 SLCO4A1Q96BD0 722 aa21.95■■□□□ 1.1
CCDC47-204ENST00000582252 PPWD1Q96BP3 646 aaKnown RBP21.95■■□□□ 1.1
CCDC47-204ENST00000582252 REPS1Q96D71 796 aa21.95■■□□□ 1.1
CCDC47-204ENST00000582252 OSBPL6Q9BZF3 934 aa21.95■■□□□ 1.1
CCDC47-204ENST00000582252 SLAMF8Q9P0V8 285 aa21.95■■□□□ 1.1
CCDC47-204ENST00000582252 RAB26Q9ULW5 256 aa21.95■■□□□ 1.1
CCDC47-204ENST00000582252 DYRK1BQ9Y463 629 aa21.95■■□□□ 1.1
CCDC47-204ENST00000582252 H0YJX3 145 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 MID1O15344 667 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 GMNNO75496 209 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 FCGR1AP12314 374 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 S100A3P33764 101 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 KIR2DL1P43626 348 aaPredicted RBP21.94■■□□□ 1.1
CCDC47-204ENST00000582252 FXNQ16595 210 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 DPY19L1Q2PZI1 675 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 SPANXN4Q5MJ08 99 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 OR9A1PQ8NGU1 263 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 CANT1Q8WVQ1 401 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms