RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 A0A087WV48 116 aa4.27□□□□□ -1.73
SMCHD1-205ENST00000581383 A0A1W2PN81 502 aa4.27□□□□□ -1.73
SMCHD1-205ENST00000581383 CASTOR2A6NHX0 329 aa4.27□□□□□ -1.73
SMCHD1-205ENST00000581383 ENO4A6NNW6 628 aa4.27□□□□□ -1.73
SMCHD1-205ENST00000581383 SLC22A3O75751 556 aa4.27□□□□□ -1.73
SMCHD1-205ENST00000581383 SLU7O95391 586 aaKnown RBP4.27□□□□□ -1.73
SMCHD1-205ENST00000581383 PRSS1P07477 247 aa4.27□□□□□ -1.73
SMCHD1-205ENST00000581383 VIMP08670 466 aaKnown RBP4.27□□□□□ -1.73
SMCHD1-205ENST00000581383 FRMD6-AS1P0C7T7 363 aa4.27□□□□□ -1.73
SMCHD1-205ENST00000581383 ADRA2CP18825 462 aa4.27□□□□□ -1.73
SMCHD1-205ENST00000581383 CHRNA7P36544 502 aa4.27□□□□□ -1.73
SMCHD1-205ENST00000581383 HSD17B3P37058 310 aa4.27□□□□□ -1.73
SMCHD1-205ENST00000581383 TNNT3P45378 269 aaPredicted RBP4.27□□□□□ -1.73
SMCHD1-205ENST00000581383 NAGLUP54802 743 aa4.27□□□□□ -1.73
SMCHD1-205ENST00000581383 MTCP1P56278 107 aa4.27□□□□□ -1.73
SMCHD1-205ENST00000581383 NPTX1Q15818 432 aa4.27□□□□□ -1.73
SMCHD1-205ENST00000581383 ZC2HC1CQ53FD0 456 aaPredicted RBP4.27□□□□□ -1.73
SMCHD1-205ENST00000581383 XKR3Q5GH77 459 aa4.27□□□□□ -1.73
SMCHD1-205ENST00000581383 LRRC73Q5JTD7 316 aa4.27□□□□□ -1.73
SMCHD1-205ENST00000581383 CEP85LQ5SZL2 805 aa4.27□□□□□ -1.73
SMCHD1-205ENST00000581383 SHEQ5VZ18 495 aa4.27□□□□□ -1.73
SMCHD1-205ENST00000581383 RBMS3Q6XE24 437 aaKnown RBP4.27□□□□□ -1.73
SMCHD1-205ENST00000581383 TRPT1Q86TN4 253 aaKnown RBP4.27□□□□□ -1.73
SMCHD1-205ENST00000581383 ISCA2Q86U28 154 aa4.27□□□□□ -1.73
SMCHD1-205ENST00000581383 KBTBD8Q8NFY9 601 aa4.27□□□□□ -1.73
SMCHD1-205ENST00000581383 PHLDA1Q8WV24 401 aaPredicted RBP4.27□□□□□ -1.73
SMCHD1-205ENST00000581383 ST6GALNAC6Q969X2 333 aa4.27□□□□□ -1.73
SMCHD1-205ENST00000581383 CCDC3Q9BQI4 270 aa4.27□□□□□ -1.73
SMCHD1-205ENST00000581383 DESI2Q9BSY9 194 aa4.27□□□□□ -1.73
SMCHD1-205ENST00000581383 SNX25Q9H3E2 840 aa4.27□□□□□ -1.73
SMCHD1-205ENST00000581383 RASAL2Q9UJF2 1139 aa4.27□□□□□ -1.73
SMCHD1-205ENST00000581383 KCNK7Q9Y2U2 307 aa4.27□□□□□ -1.73
SMCHD1-205ENST00000581383 KIAA1210Q9ULL0 1709 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 A0A1W2PPW3 197 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 PRR23AA6NEV1 266 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 H0Y626 953 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 CCER2I3L3R5 266 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 ARPC2O15144 300 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 ATP6V0E1O15342 81 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 RPS6KA5O75582 802 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 ATP6AP2O75787 350 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 TGDSO95455 350 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 SP1P08047 785 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 MYL6BP14649 208 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 MUTP22033 750 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 CDH3P22223 829 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 SP100P23497 879 aaPredicted RBP4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 CD27P26842 260 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 CEACAM8P31997 349 aaPredicted RBP4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 WNT5AP41221 380 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 PTENP60484 403 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 RASGEF1BQ0VAM2 473 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 TNK1Q13470 666 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 PTK6Q13882 451 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 NONOQ15233 471 aaKnown RBP eCLIP4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 TAF13Q15543 124 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 UGCGQ16739 394 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 CTU2Q2VPK5 515 aaKnown RBP4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 LBHQ53QV2 105 aaPredicted RBP4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 ZRANB3Q5FWF4 1079 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 SLC35E4Q6ICL7 350 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 TRMT1LQ7Z2T5 733 aaKnown RBP4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 TIGD4Q8IY51 512 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 RYBPQ8N488 228 aaPredicted RBP4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 RASGEF1AQ8N9B8 481 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 MR1Q95460 341 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 SENP5Q96HI0 755 aaPredicted RBP4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 INPP5KQ9BT40 448 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 TLE6Q9H808 572 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 SDF2L1Q9HCN8 221 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 GSN-AS1Q9NRJ2 163 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 FGF21Q9NSA1 209 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 STUB1Q9UNE7 303 aa4.26□□□□□ -1.73
SMCHD1-205ENST00000581383 WDR81Q562E7 1941 aa4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 FAM170AA1A519 330 aa4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 C2orf81A6NN90 581 aa4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 SMIM1B2RUZ4 78 aa4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 PSMA7O14818 248 aa4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 LUC7L3O95232 432 aaKnown RBP4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 SIX3O95343 332 aaPredicted RBP4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 NGFP01138 241 aa4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 LBPP18428 481 aa4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 CTNNA1P35221 906 aaKnown RBP4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 NKX2-1P43699 371 aaPredicted RBP4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 RPL21P46778 160 aaKnown RBP4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 RGS7P49802 495 aa4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 GMPSP49915 693 aaPredicted RBP4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 VAMP7P51809 220 aa4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 GCNT1Q02742 428 aa4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 KLC1Q07866 573 aa4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 ILF2Q12905 390 aaKnown RBP4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 RRS1Q15050 365 aaKnown RBP4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 PHKG1Q16816 387 aa4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 MRGPRG-AS1Q2M3A8 158 aa4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 NHSL2Q5HYW2 709 aa4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 CEACAM20Q6UY09 585 aa4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 TMEM182Q6ZP80 229 aaPredicted RBP4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 NRARPQ7Z6K4 114 aa4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 DZIP1Q86YF9 867 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms