RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	RASGRF2	O14827	1237 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	TMPRSS2	O15393	492 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	GOSR1	O95249	250 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	YEATS4	O95619	227 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	CNOT4	O95628	575 aa	Known RBP	5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	PDHA1	P08559	390 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	ZNF24	P17028	368 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	UGT1A1	P22309	533 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	CA4	P22748	312 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	UQCRC1	P31930	480 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	ME1	P48163	572 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	OCA2	Q04671	838 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	ITK	Q08881	620 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	DEFB110	Q30KQ9	67 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	SLC25A35	Q3KQZ1	300 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	CCDC14	Q49A88	953 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	RAB6C	Q53S08	254 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	FKBP15	Q5T1M5	1219 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	RESP18	Q5W5W9	173 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	PDPK2P	Q6A1A2	396 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	TTLL10	Q6ZVT0	673 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	NEK10	Q6ZWH5	1172 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	CXorf67	Q86X51	503 aa	Predicted RBP	5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	ZNF547	Q8IVP9	402 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	MCAT	Q8IVS2	390 aa	Known RBP	5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	SIAH3	Q8IW03	269 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	SMYD4	Q8IYR2	804 aa	Predicted RBP	5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	GDAP1	Q8TB36	358 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	BRSK1	Q8TDC3	778 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	FAM172A	Q8WUF8	416 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	LCN9	Q8WX39	176 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	C8orf44	Q96CB5	159 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	ZNF354B	Q96LW1	612 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	PIP5K1A	Q99755	562 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	PITPNM3	Q9BZ71	974 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	RAB6C	Q9H0N0	254 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	DEF6	Q9H4E7	631 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	KIR3DX1	Q9H7L2	352 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	SLC22A11	Q9NSA0	550 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	MBNL3	Q9NUK0	354 aa	Known RBP	5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	RIC8B	Q9NVN3	520 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	ABCA1	O95477	2261 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	EML6	Q6ZMW3	1958 aa		5.69	□□□□□ -1.5
KPNB1-209	ENST00000580158	HRNR	Q86YZ3	2850 aa	Predicted RBP	5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	BECN2	A8MW95	431 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158		H3BMH7	237 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	TLX2	O43763	284 aa	Predicted RBP	5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	CDC40	O60508	579 aa	Known RBP eCLIP	5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	MTX2	O75431	263 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	POP7	O75817	140 aa	Known RBP	5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	SUN1	O94901	812 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	ONECUT2	O95948	504 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	COX6A1	P12074	109 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	CYP11B1	P15538	503 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	PTPN9	P43378	593 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	AIF1	P55008	147 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	BPIFB4	P59827	614 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	MAX	P61244	160 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	TMPRSS15	P98073	1019 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	ID3	Q02535	119 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	KLC1	Q07866	573 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	TMEM115	Q12893	351 aa	Predicted RBP	5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	MAPKAPK3	Q16644	382 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	IFI16	Q16666	785 aa	Known RBP	5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	PDLIM3	Q53GG5	364 aa	Predicted RBP	5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	C2CD6	Q53TS8	623 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	GPRC6A	Q5T6X5	926 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	ALS2CL	Q60I27	953 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	ARHGAP36	Q6ZRI8	547 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	NLRP9	Q7RTR0	991 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	GALNTL5	Q7Z4T8	443 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	WDR53	Q7Z5U6	358 aa	Predicted RBP	5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	ARHGAP12	Q8IWW6	846 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	CHERP	Q8IWX8	916 aa	Known RBP	5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	TRAM1L1	Q8N609	369 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	C19orf47	Q8N9M1	422 aa	Known RBP	5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	ACVR1C	Q8NER5	493 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	GPT2	Q8TD30	523 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	MIEF2	Q96C03	454 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	SCMH1	Q96GD3	660 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	HRASLS5	Q96KN8	279 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	FANCD2OS	Q96PS1	177 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	SMIM14	Q96QK8	99 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	MGME1	Q9BQP7	344 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	UTP23	Q9BRU9	249 aa	Known RBP	5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	YIPF4	Q9BSR8	244 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	NUP85	Q9BW27	656 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	FAM60A	Q9NP50	221 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	C3orf18	Q9UK00	162 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	PLCL2	Q9UPR0	1127 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	HEBP2	Q9Y5Z4	205 aa		5.68	□□□□□ -1.5
KPNB1-209	ENST00000580158	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	5.68	□□□□□ -1.5	2e-8	■■■■■ 31.6
KPNB1-209	ENST00000580158	CR1	P17927	2039 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	TUBAL3	A6NHL2	446 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	VSTM2B	A6NLU5	285 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158		A8MUI8	341 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	FAM47E-STBD1	D6RA91	191 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	EEF2K	O00418	725 aa	Known RBP	5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	SYT5	O00445	386 aa		5.67	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms