RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 GCGRP47871 477 aa17.13■□□□□ 0.33
MKS1-209ENST00000580127 OR1D4P47884 311 aa17.13■□□□□ 0.33
MKS1-209ENST00000580127 VSX2P58304 361 aaPredicted RBP17.13■□□□□ 0.33
MKS1-209ENST00000580127 AP2B1P63010 937 aa17.13■□□□□ 0.33
MKS1-209ENST00000580127 MFAP5Q13361 173 aa17.13■□□□□ 0.33
MKS1-209ENST00000580127 KBTBD2Q8IY47 623 aa17.13■□□□□ 0.33
MKS1-209ENST00000580127 TAB3Q8N5C8 712 aaPredicted RBP17.13■□□□□ 0.33
MKS1-209ENST00000580127 LMNTD1Q8N9Z9 388 aa17.13■□□□□ 0.33
MKS1-209ENST00000580127 LINC01555Q8NAE3 123 aa17.13■□□□□ 0.33
MKS1-209ENST00000580127 OR11G2Q8NGC1 345 aa17.13■□□□□ 0.33
MKS1-209ENST00000580127 SLC35B2Q8TB61 432 aa17.13■□□□□ 0.33
MKS1-209ENST00000580127 SPSB2Q99619 263 aa17.13■□□□□ 0.33
MKS1-209ENST00000580127 FRMD8P1Q9BZ68 369 aaPredicted RBP17.13■□□□□ 0.33
MKS1-209ENST00000580127 OLAHQ9NV23 265 aa17.13■□□□□ 0.33
MKS1-209ENST00000580127 VSTM2BA6NLU5 285 aa17.12■□□□□ 0.33
MKS1-209ENST00000580127 PRMT5O14744 637 aaPredicted RBP17.12■□□□□ 0.33
MKS1-209ENST00000580127 PCDH17O14917 1159 aa17.12■□□□□ 0.33
MKS1-209ENST00000580127 PFDN6O15212 129 aa17.12■□□□□ 0.33
MKS1-209ENST00000580127 PRPF4O43172 522 aaKnown RBP eCLIP17.12■□□□□ 0.33
MKS1-209ENST00000580127 UQCRHP07919 91 aa17.12■□□□□ 0.33
MKS1-209ENST00000580127 ERVK-10P10266 1014 aa17.12■□□□□ 0.33
MKS1-209ENST00000580127 FOXL2P58012 376 aa17.12■□□□□ 0.33
MKS1-209ENST00000580127 ARG2P78540 354 aa17.12■□□□□ 0.33
MKS1-209ENST00000580127 ZRSR2Q15696 482 aaKnown RBP17.12■□□□□ 0.33
MKS1-209ENST00000580127 MUM1Q2TAK8 710 aa17.12■□□□□ 0.33
MKS1-209ENST00000580127 C1QL3Q5VWW1 255 aa17.12■□□□□ 0.33
MKS1-209ENST00000580127 LINC00696Q6ZRV3 163 aa17.12■□□□□ 0.33
MKS1-209ENST00000580127 SHISA6Q6ZSJ9 500 aa17.12■□□□□ 0.33
MKS1-209ENST00000580127 OTOAQ7RTW8 1153 aa17.12■□□□□ 0.33
MKS1-209ENST00000580127 TAX1BP1Q86VP1 789 aa17.12■□□□□ 0.33
MKS1-209ENST00000580127 LRRC6Q86X45 466 aa17.12■□□□□ 0.33
MKS1-209ENST00000580127 SRRM1Q8IYB3 904 aaKnown RBP17.12■□□□□ 0.33
MKS1-209ENST00000580127 LRRC57Q8N9N7 239 aa17.12■□□□□ 0.33
MKS1-209ENST00000580127 PPHLN1Q8NEY8 458 aaKnown RBP17.12■□□□□ 0.33
MKS1-209ENST00000580127 OR1N1Q8NGS0 311 aa17.12■□□□□ 0.33
MKS1-209ENST00000580127 OR13J1Q8NGT2 312 aa17.12■□□□□ 0.33
MKS1-209ENST00000580127 ZNF285Q96NJ3 590 aa17.12■□□□□ 0.33
MKS1-209ENST00000580127 UTP6Q9NYH9 597 aaKnown RBP17.12■□□□□ 0.33
MKS1-209ENST00000580127 ZC3H7BQ9UGR2 993 aaKnown RBP17.12■□□□□ 0.33
MKS1-209ENST00000580127 TTC7AQ9ULT0 858 aaPredicted RBP17.12■□□□□ 0.33
MKS1-209ENST00000580127 RCCD1A6NED2 376 aa17.11■□□□□ 0.33
MKS1-209ENST00000580127 AP3B1O00203 1094 aa17.11■□□□□ 0.33
MKS1-209ENST00000580127 NDUFS3O75489 264 aa17.11■□□□□ 0.33
MKS1-209ENST00000580127 SUN1O94901 812 aa17.11■□□□□ 0.33
MKS1-209ENST00000580127 MCM3P25205 808 aa17.11■□□□□ 0.33
MKS1-209ENST00000580127 TNFRSF8P28908 595 aa17.11■□□□□ 0.33
MKS1-209ENST00000580127 ACVR1Q04771 509 aa17.11■□□□□ 0.33
MKS1-209ENST00000580127 KIF5AQ12840 1032 aa17.11■□□□□ 0.33
MKS1-209ENST00000580127 SP5Q6BEB4 398 aaPredicted RBP17.11■□□□□ 0.33
MKS1-209ENST00000580127 NDUFAF7Q7L592 441 aa17.11■□□□□ 0.33
MKS1-209ENST00000580127 STT3BQ8TCJ2 826 aa17.11■□□□□ 0.33
MKS1-209ENST00000580127 MARVELD3Q96A59 401 aa17.11■□□□□ 0.33
MKS1-209ENST00000580127 MAGEB10Q96LZ2 347 aaPredicted RBP17.11■□□□□ 0.33
MKS1-209ENST00000580127 ETNK1Q9HBU6 452 aa17.11■□□□□ 0.33
MKS1-209ENST00000580127 CATSPERZQ9NTU4 200 aa17.11■□□□□ 0.33
MKS1-209ENST00000580127 CTSFQ9UBX1 484 aa17.11■□□□□ 0.33
MKS1-209ENST00000580127 GNPTGQ9UJJ9 305 aa17.11■□□□□ 0.33
MKS1-209ENST00000580127 C3orf18Q9UK00 162 aa17.11■□□□□ 0.33
MKS1-209ENST00000580127 ZNF148Q9UQR1 794 aa17.11■□□□□ 0.33
MKS1-209ENST00000580127 MAU2Q9Y6X3 613 aa17.11■□□□□ 0.33
MKS1-209ENST00000580127 NSG1A0A0A6YYJ2 146 aa17.1■□□□□ 0.33
MKS1-209ENST00000580127 TRAV17A0A0B4J275 112 aa17.1■□□□□ 0.33
MKS1-209ENST00000580127 GRID2IPA4D2P6 1211 aa17.1■□□□□ 0.33
MKS1-209ENST00000580127 SOWAHDA6NJG2 315 aa17.1■□□□□ 0.33
MKS1-209ENST00000580127 CD3EAPO15446 510 aaKnown RBP17.1■□□□□ 0.33
MKS1-209ENST00000580127 PHF2O75151 1096 aa17.1■□□□□ 0.33
MKS1-209ENST00000580127 ALOX12BO75342 701 aa17.1■□□□□ 0.33
MKS1-209ENST00000580127 JRKO75564 520 aa17.1■□□□□ 0.33
MKS1-209ENST00000580127 WFS1O76024 890 aa17.1■□□□□ 0.33
MKS1-209ENST00000580127 IFNB1P01574 187 aa17.1■□□□□ 0.33
MKS1-209ENST00000580127 EIF2S1P05198 315 aaKnown RBP17.1■□□□□ 0.33
MKS1-209ENST00000580127 STSP08842 583 aa17.1■□□□□ 0.33
MKS1-209ENST00000580127 ZGLP1P0C6A0 271 aa17.1■□□□□ 0.33
MKS1-209ENST00000580127 ICAM2P13598 275 aa17.1■□□□□ 0.33
MKS1-209ENST00000580127 ELAVL4P26378 380 aaKnown RBP17.1■□□□□ 0.33
MKS1-209ENST00000580127 CMPK1P30085 196 aa17.1■□□□□ 0.33
MKS1-209ENST00000580127 EMP3P54852 163 aa17.1■□□□□ 0.33
MKS1-209ENST00000580127 GDF10P55107 478 aa17.1■□□□□ 0.33
MKS1-209ENST00000580127 KLC1Q07866 573 aa17.1■□□□□ 0.33
MKS1-209ENST00000580127 KLF1Q13351 362 aaPredicted RBP17.1■□□□□ 0.33
MKS1-209ENST00000580127 VRK3Q8IV63 474 aa17.1■□□□□ 0.33
MKS1-209ENST00000580127 MPP5Q8N3R9 675 aa17.1■□□□□ 0.33
MKS1-209ENST00000580127 HMGCLL1Q8TB92 370 aa17.1■□□□□ 0.33
MKS1-209ENST00000580127 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.1■□□□□ 0.33
MKS1-209ENST00000580127 IL17FQ96PD4 163 aa17.1■□□□□ 0.33
MKS1-209ENST00000580127 MENTQ9BUN1 341 aa17.1■□□□□ 0.33
MKS1-209ENST00000580127 YIPF2Q9BWQ6 316 aa17.1■□□□□ 0.33
MKS1-209ENST00000580127 COPG2Q9UBF2 871 aa17.1■□□□□ 0.33
MKS1-209ENST00000580127 SLC2A6Q9UGQ3 507 aa17.1■□□□□ 0.33
MKS1-209ENST00000580127 CIDEBQ9UHD4 219 aa17.1■□□□□ 0.33
MKS1-209ENST00000580127 MRPS2Q9Y399 296 aaKnown RBP17.1■□□□□ 0.33
MKS1-209ENST00000580127 KLK4Q9Y5K2 254 aa17.1■□□□□ 0.33
MKS1-209ENST00000580127 CSAG2Q9Y5P2 127 aa17.1■□□□□ 0.33
MKS1-209ENST00000580127 NBPF19A0A087WUL8 3843 aa17.09■□□□□ 0.33
MKS1-209ENST00000580127 IQCF5A8MTL0 148 aa17.09■□□□□ 0.33
MKS1-209ENST00000580127 VPS26AO75436 327 aa17.09■□□□□ 0.33
MKS1-209ENST00000580127 FBLP22087 321 aaKnown RBP17.09■□□□□ 0.33
MKS1-209ENST00000580127 EMP2P54851 167 aa17.09■□□□□ 0.33
MKS1-209ENST00000580127 GRB7Q14451 532 aa17.09■□□□□ 0.33
MKS1-209ENST00000580127 INAQ16352 499 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms