RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 C10orf107Q8IVU9 208 aa15.36■□□□□ 0.05
CSNK1D-212ENST00000580061 OR2A1Q8NGT9 310 aa15.36■□□□□ 0.05
CSNK1D-212ENST00000580061 FLVCR1-AS1Q8TAF5 88 aa15.36■□□□□ 0.05
CSNK1D-212ENST00000580061 SLC22A18Q96BI1 424 aa15.36■□□□□ 0.05
CSNK1D-212ENST00000580061 OR4K3Q96R72 315 aa15.36■□□□□ 0.05
CSNK1D-212ENST00000580061 MECRQ9BV79 373 aa15.36■□□□□ 0.05
CSNK1D-212ENST00000580061 C1QTNF3Q9BXJ4 246 aa15.36■□□□□ 0.05
CSNK1D-212ENST00000580061 MLXIPLQ9NP71 852 aa15.36■□□□□ 0.05
CSNK1D-212ENST00000580061 TOR4AQ9NXH8 423 aa15.36■□□□□ 0.05
CSNK1D-212ENST00000580061 NKIRAS1Q9NYS0 192 aa15.36■□□□□ 0.05
CSNK1D-212ENST00000580061 EPHA6Q9UF33 1036 aa15.36■□□□□ 0.05
CSNK1D-212ENST00000580061 SLC22A14Q9Y267 594 aa15.36■□□□□ 0.05
CSNK1D-212ENST00000580061 HEATR5BQ9P2D3 2071 aa15.36■□□□□ 0.05
CSNK1D-212ENST00000580061 GSAPA4D1B5 854 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 LRRC14BA6NHZ5 514 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 K7EPI3 171 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 CCNT2O60583 730 aaKnown RBP15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 RPS17P08708 135 aaKnown RBP15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 IMPDH1P20839 514 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 PSMB5P28074 263 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 CSF2RBP32927 897 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 PPM1FP49593 454 aaPredicted RBP15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 DNAJB13P59910 316 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 PPP1CAP62136 330 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 HERVK_113P63132 956 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 ZNF678Q5SXM1 525 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 THEMIS2Q5TEJ8 643 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 PRAMEF13Q5VWM6 474 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 LIPMQ5VYY2 423 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 ARMC6Q6NXE6 501 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 METTL2BQ6P1Q9 378 aaKnown RBP15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 WDR74Q6RFH5 385 aaPredicted RBP15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 LCTLQ6UWM7 567 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 USP53Q70EK8 1073 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 LRRC70Q7Z2Q7 622 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 MDM1Q8TC05 714 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 MGARPQ8TDB4 240 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 NCSTNQ92542 709 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 L3HYPDHQ96EM0 354 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 TMEM237Q96Q45 408 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 OR2A14Q96R47 310 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 MIPEPQ99797 713 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 ERVK-6Q9BXR3 956 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 PCBD2Q9H0N5 130 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 ABCG4Q9H172 646 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 ABCF3Q9NUQ8 709 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 OPTCQ9UBM4 332 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 TAC3Q9UHF0 121 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 POMT2Q9UKY4 750 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 PCDHB11Q9Y5F2 797 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 PCDHGA1Q9Y5H4 931 aa15.35■□□□□ 0.05
CSNK1D-212ENST00000580061 NTN3O00634 580 aaPredicted RBP15.34■□□□□ 0.05
CSNK1D-212ENST00000580061 E2F3O00716 465 aa15.34■□□□□ 0.05
CSNK1D-212ENST00000580061 BIRC5O15392 142 aa15.34■□□□□ 0.05
CSNK1D-212ENST00000580061 CAPN5O15484 640 aaPredicted RBP15.34■□□□□ 0.05
CSNK1D-212ENST00000580061 TRIM13O60858 407 aa15.34■□□□□ 0.05
CSNK1D-212ENST00000580061 RFPL3O75679 317 aa15.34■□□□□ 0.05
CSNK1D-212ENST00000580061 CPNE6O95741 557 aa15.34■□□□□ 0.05
CSNK1D-212ENST00000580061 C9P02748 559 aa15.34■□□□□ 0.05
CSNK1D-212ENST00000580061 UGT2B7P16662 529 aa15.34■□□□□ 0.05
CSNK1D-212ENST00000580061 NPPBP16860 134 aa15.34■□□□□ 0.05
CSNK1D-212ENST00000580061 PRDX3P30048 256 aaKnown RBP15.34■□□□□ 0.05
CSNK1D-212ENST00000580061 GFERP55789 205 aa15.34■□□□□ 0.05
CSNK1D-212ENST00000580061 SF1Q15637 639 aaKnown RBP15.34■□□□□ 0.05
CSNK1D-212ENST00000580061 CLPPQ16740 277 aaPredicted RBP15.34■□□□□ 0.05
CSNK1D-212ENST00000580061 SLC5A12Q1EHB4 618 aa15.34■□□□□ 0.05
CSNK1D-212ENST00000580061 UNC50Q53HI1 259 aa15.34■□□□□ 0.05
CSNK1D-212ENST00000580061 HHATQ5VTY9 493 aa15.34■□□□□ 0.05
CSNK1D-212ENST00000580061 IRGCQ6NXR0 463 aa15.34■□□□□ 0.05
CSNK1D-212ENST00000580061 SPESP1Q6UW49 350 aa15.34■□□□□ 0.05
CSNK1D-212ENST00000580061 PLXDC1Q8IUK5 500 aa15.34■□□□□ 0.05
CSNK1D-212ENST00000580061 PAIP2Q9BPZ3 127 aaKnown RBP15.34■□□□□ 0.05
CSNK1D-212ENST00000580061 NUDT22Q9BRQ3 303 aa15.34■□□□□ 0.05
CSNK1D-212ENST00000580061 HAUS8Q9BT25 410 aa15.34■□□□□ 0.05
CSNK1D-212ENST00000580061 ACAT2Q9BWD1 397 aa15.34■□□□□ 0.05
CSNK1D-212ENST00000580061 PITPNM3Q9BZ71 974 aa15.34■□□□□ 0.05
CSNK1D-212ENST00000580061 DNAJC11Q9NVH1 559 aa15.34■□□□□ 0.05
CSNK1D-212ENST00000580061 PCTPQ9UKL6 214 aa15.34■□□□□ 0.05
CSNK1D-212ENST00000580061 CDV3Q9UKY7 258 aaKnown RBP15.34■□□□□ 0.05
CSNK1D-212ENST00000580061 ATXN7L1Q9ULK2 861 aaPredicted RBP15.34■□□□□ 0.05
CSNK1D-212ENST00000580061 MN1Q10571 1320 aaPredicted RBP15.34■□□□□ 0.05
CSNK1D-212ENST00000580061 PTPRZ1P23471 2315 aaPredicted RBP15.34■□□□□ 0.05
CSNK1D-212ENST00000580061 WDR91A4D1P6 747 aa15.33■□□□□ 0.04
CSNK1D-212ENST00000580061 HOXB3P14651 431 aaPredicted RBP15.33■□□□□ 0.04
CSNK1D-212ENST00000580061 CHN1P15882 459 aa15.33■□□□□ 0.04
CSNK1D-212ENST00000580061 EPORP19235 508 aa15.33■□□□□ 0.04
CSNK1D-212ENST00000580061 NAGLUP54802 743 aa15.33■□□□□ 0.04
CSNK1D-212ENST00000580061 YBX1P67809 324 aaKnown RBP15.33■□□□□ 0.04
CSNK1D-212ENST00000580061 E2F1Q01094 437 aa15.33■□□□□ 0.04
CSNK1D-212ENST00000580061 PRDX1Q06830 199 aaKnown RBP15.33■□□□□ 0.04
CSNK1D-212ENST00000580061 CDC16Q13042 620 aa15.33■□□□□ 0.04
CSNK1D-212ENST00000580061 ICE2Q659A1 982 aa15.33■□□□□ 0.04
CSNK1D-212ENST00000580061 TMEM71Q6P5X7 295 aa15.33■□□□□ 0.04
CSNK1D-212ENST00000580061 TMPRSS9Q7Z410 1059 aa15.33■□□□□ 0.04
CSNK1D-212ENST00000580061 NUDCD3Q8IVD9 361 aa15.33■□□□□ 0.04
CSNK1D-212ENST00000580061 TEX9Q8N6V9 391 aa15.33■□□□□ 0.04
CSNK1D-212ENST00000580061 OR2L3Q8NG85 312 aa15.33■□□□□ 0.04
CSNK1D-212ENST00000580061 WDR48Q8TAF3 677 aa15.33■□□□□ 0.04
CSNK1D-212ENST00000580061 ZNF483Q8TF39 744 aaPredicted RBP15.33■□□□□ 0.04
CSNK1D-212ENST00000580061 MOCOSQ96EN8 888 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms