RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-208	ENST00000579466	TSTA3	Q13630	321 aa	Predicted RBP	9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	GRB7	Q14451	532 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	SEMA3A	Q14563	771 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	CCSMST1	Q4G0I0	132 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	DNAJC21	Q5F1R6	531 aa	Known RBP	9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	VWA2	Q5GFL6	755 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	ZC3H12B	Q5HYM0	836 aa	Known RBP	9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	TCTE1	Q5JU00	501 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	KCTD11	Q693B1	232 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	CNST	Q6PJW8	725 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	PACS1	Q6VY07	963 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	GDF7	Q7Z4P5	450 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	MRGPRG	Q86SM5	289 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	LDB1	Q86U70	411 aa	Predicted RBP	9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	CNGA4	Q8IV77	575 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	DCUN1D3	Q8IWE4	304 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	KBTBD2	Q8IY47	623 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	SLC22A15	Q8IZD6	547 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	OR4N4	Q8N0Y3	316 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	DNAAF3	Q8N9W5	541 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	RNF214	Q8ND24	703 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	OR6P1	Q8NGX9	317 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	OR2L8	Q8NGY9	312 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	DENND1A	Q8TEH3	1009 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	COG1	Q8WTW3	980 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	ITLN2	Q8WWU7	325 aa	Predicted RBP	9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	NR4A3	Q92570	626 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	HDAC10	Q969S8	669 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	CCDC120	Q96HB5	630 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	VPS50	Q96JG6	964 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	PPP1R2P1	Q96PQ5	205 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	MENT	Q9BUN1	341 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	SLC26A1	Q9H2B4	701 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	RUBCNL	Q9H714	662 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	ZNF304	Q9HCX3	659 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	SUCO	Q9UBS9	1254 aa	Known RBP	9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	PCDHA13	Q9Y5I0	950 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	FAM169A	Q9Y6X4	670 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	CACNA1C	Q13936	2221 aa		9.19	□□□□□ -0.94
MSI2-208	ENST00000579466	RASGRF2	O14827	1237 aa		9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	USP1	O94782	785 aa		9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	RPN2	P04844	631 aa		9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	APOA4	P06727	396 aa		9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	ZGLP1	P0C6A0	271 aa		9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	ERVK-10	P10266	1014 aa		9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	COX6A1	P12074	109 aa		9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	COX6B1	P14854	86 aa		9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	HTR1E	P28566	365 aa		9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	CARS	P49589	748 aa	Known RBP	9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	ST13	P50502	369 aa	Known RBP	9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	TNFSF10	P50591	281 aa		9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	RWDD2B	P57060	319 aa		9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	COPS2	P61201	443 aa		9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	YBX1	P67809	324 aa	Known RBP	9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	SPA17	Q15506	151 aa		9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	PARP6	Q2NL67	630 aa		9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	AFTPH	Q6ULP2	937 aa		9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	PPP1R21	Q6ZMI0	780 aa		9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	LAPTM4B	Q86VI4	370 aa		9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	OR13J1	Q8NGT2	312 aa		9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	ALG3	Q92685	438 aa		9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	NACC2	Q96BF6	587 aa		9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	SLC22A18	Q96BI1	424 aa		9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	CABS1	Q96KC9	395 aa		9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	C19orf43	Q9BQ61	176 aa		9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	ACAT2	Q9BWD1	397 aa		9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	SETD2	Q9BYW2	2564 aa	Predicted RBP	9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	LUC7L	Q9NQ29	371 aa	Known RBP	9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	TRPC4	Q9UBN4	977 aa		9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	ZNF282	Q9UDV7	671 aa	Predicted RBP	9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	TTC7A	Q9ULT0	858 aa	Predicted RBP	9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	R3HDM2	Q9Y2K5	976 aa	Known RBP	9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	PCDHA3	Q9Y5H8	950 aa		9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	NFS1	Q9Y697	457 aa		9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	ADGRG4	Q8IZF6	3080 aa		9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	CELSR1	Q9NYQ6	3014 aa		9.18	□□□□□ -0.94
MSI2-208	ENST00000579466	HEATR5B	Q9P2D3	2071 aa		9.17	□□□□□ -0.94
MSI2-208	ENST00000579466	TRAV17	A0A0B4J275	112 aa		9.17	□□□□□ -0.94
MSI2-208	ENST00000579466	RCCD1	A6NED2	376 aa		9.17	□□□□□ -0.94
MSI2-208	ENST00000579466	MROH6	A6NGR9	719 aa		9.17	□□□□□ -0.94
MSI2-208	ENST00000579466	VSTM2B	A6NLU5	285 aa		9.17	□□□□□ -0.94
MSI2-208	ENST00000579466	PCDH17	O14917	1159 aa		9.17	□□□□□ -0.94
MSI2-208	ENST00000579466	WFS1	O76024	890 aa		9.17	□□□□□ -0.94
MSI2-208	ENST00000579466	TJP3	O95049	919 aa		9.17	□□□□□ -0.94
MSI2-208	ENST00000579466	PRR35	P0CG20	571 aa		9.17	□□□□□ -0.94
MSI2-208	ENST00000579466	CXCR2	P25025	360 aa		9.17	□□□□□ -0.94
MSI2-208	ENST00000579466	MST1	P26927	711 aa		9.17	□□□□□ -0.94
MSI2-208	ENST00000579466	CETN2	P41208	172 aa		9.17	□□□□□ -0.94
MSI2-208	ENST00000579466	RIPPLY3	P57055	190 aa		9.17	□□□□□ -0.94
MSI2-208	ENST00000579466	PRAME	P78395	509 aa		9.17	□□□□□ -0.94
MSI2-208	ENST00000579466	PLOD1	Q02809	727 aa	Predicted RBP	9.17	□□□□□ -0.94
MSI2-208	ENST00000579466	TMED2	Q15363	201 aa		9.17	□□□□□ -0.94
MSI2-208	ENST00000579466	SYT16	Q17RD7	645 aa		9.17	□□□□□ -0.94
MSI2-208	ENST00000579466	FAM214A	Q32MH5	1076 aa		9.17	□□□□□ -0.94
MSI2-208	ENST00000579466	P3H1	Q32P28	736 aa		9.17	□□□□□ -0.94
MSI2-208	ENST00000579466	FASTKD1	Q53R41	847 aa	Known RBP	9.17	□□□□□ -0.94
MSI2-208	ENST00000579466	YOD1	Q5VVQ6	348 aa	Predicted RBP	9.17	□□□□□ -0.94
MSI2-208	ENST00000579466	TMEM207	Q6UWW9	146 aa		9.17	□□□□□ -0.94
MSI2-208	ENST00000579466	UNC5D	Q6UXZ4	953 aa		9.17	□□□□□ -0.94
MSI2-208	ENST00000579466	OR4L1	Q8NH43	312 aa		9.17	□□□□□ -0.94

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