RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 ZNF460Q14592 562 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 KIR2DS5Q14953 304 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 RASA2Q15283 850 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 INSCQ1MX18 579 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 TNFAIP8L3Q5GJ75 292 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 PLEKHS1Q5SXH7 462 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 HECTD2Q5U5R9 776 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 PAQR3Q6TCH7 311 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 SBSNQ6UWP8 590 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 C3orf62Q6ZUJ4 267 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 NEK10Q6ZWH5 1172 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 TRMT10CQ7L0Y3 403 aaKnown RBP3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 TAS2R42Q7RTR8 314 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 SPRED1Q7Z699 444 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 STRA8Q7Z7C7 330 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 TAF8Q7Z7C8 310 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 CLEC14AQ86T13 490 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 CCDC25Q86WR0 208 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 GKN2Q86XP6 184 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 SLITRK4Q8IW52 837 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 GALNT12Q8IXK2 581 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 CENPLQ8N0S6 344 aaPredicted RBP3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 LINC01555Q8NAE3 123 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 SIDT2Q8NBJ9 832 aaKnown RBP3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 KCT2Q8NC54 265 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 FAM46DQ8NEK8 389 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 CALML6Q8TD86 181 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 IFT81Q8WYA0 676 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 RSC1A1Q92681 617 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 CCDC74AQ96AQ1 378 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 SKA1Q96BD8 255 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 PDLIM5Q96HC4 596 aaKnown RBP3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 PRR11Q96HE9 360 aaPredicted RBP3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 CNDP2Q96KP4 475 aaKnown RBP3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 GPR78Q96P69 363 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 GPR21Q99679 349 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 CPNE1Q99829 537 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 RTKNQ9BST9 563 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 SLC13A1Q9BZW2 595 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 DPEP2Q9H4A9 486 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 KIR3DX1Q9H7L2 352 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 SYNPO2LQ9H987 977 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 CAB39LQ9H9S4 337 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 UCK1Q9HA47 277 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 POPDC3Q9HBV1 291 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 SLC40A1Q9NP59 571 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 POT1Q9NUX5 634 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 SEMA5BQ9P283 1151 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 PDP2Q9P2J9 529 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 CPNE7Q9UBL6 633 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 FETUBQ9UGM5 382 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 ZNHIT2Q9UHR6 403 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 SLC24A2Q9UI40 661 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 GNPTGQ9UJJ9 305 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 ZNF180Q9UJW8 692 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 CORO1CQ9ULV4 474 aaPredicted RBP3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 PSMD13Q9UNM6 376 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 ICKQ9UPZ9 632 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 RUVBL2Q9Y230 463 aaKnown RBP3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 DNAJC16Q9Y2G8 782 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 DHRS7Q9Y394 339 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 PCDHGA1Q9Y5H4 931 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 COMMD10Q9Y6G5 202 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 DMXL2Q8TDJ6 3036 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 CROCCQ5TZA2 2017 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 MED13Q9UHV7 2174 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 ACACAQ13085 2346 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 PTPRQQ9UMZ3 2332 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 ZZEF1O43149 2961 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 ANKRD11Q6UB99 2663 aaPredicted RBP3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 UBA6A0AVT1 1052 aaPredicted RBP3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 PMS2P1A4D2B8 440 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 NEMP2A6NFY4 417 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 OR5K4A6NMS3 321 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 FOXO6A8MYZ6 492 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 TARM1B6A8C7 271 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 D6RAR5 112 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 H3BMH7 237 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 MYO1CO00159 1063 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 EIF3FO00303 357 aaPredicted RBP3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 BTN3A3O00478 584 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 PHGDHO43175 533 aaKnown RBP3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 OPA1O60313 960 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 NDUFS3O75489 264 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 RFPL1O75677 317 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 C1orf105O95561 183 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 LDOC1O95751 146 aaPredicted RBP3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 C9P02748 559 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 ITGA2BP08514 1039 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 OR56A5P0C7T3 313 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 FTH1P19P0C7X4 201 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 MPC1LP0DKB6 136 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 RALBP11234 206 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 MTHFD2P13995 350 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 CTSEP14091 401 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 H2AFXP16104 143 aaPredicted RBP3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 IDSP22304 550 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 PMLP29590 882 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 PKLRP30613 574 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 STX2P32856 288 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms