RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 A0A1B0GX78 115 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 A0A1W2PPV9 198 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 ANKUB1A6NFN9 424 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 ERI2A8K979 691 aaKnown RBP8.55□□□□□ -1.04
GGA3-207ENST00000578896 AGPSO00116 658 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 DSCR3O14972 297 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 NIPSNAP2O75323 286 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 NDUFS3O75489 264 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 SLCO2B1O94956 709 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 C1orf105O95561 183 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 S1PR4O95977 384 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 LDLRP01130 860 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 MMP11P24347 488 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 MGAT1P26572 445 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 FMO4P31512 558 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 BASP1P80723 227 aaKnown RBP8.55□□□□□ -1.04
GGA3-207ENST00000578896 SRSF11Q05519 484 aaKnown RBP8.55□□□□□ -1.04
GGA3-207ENST00000578896 Q0VFX4 171 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 TSTA3Q13630 321 aaPredicted RBP8.55□□□□□ -1.04
GGA3-207ENST00000578896 TMED2Q15363 201 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 RBBP7Q16576 425 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 CRB2Q5IJ48 1285 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 PCID2Q5JVF3 399 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 UNC5DQ6UXZ4 953 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 LINC00696Q6ZRV3 163 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 Q6ZS92 163 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 CCDC89Q8N998 374 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 CATSPER1Q8NEC5 780 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 DLG3Q92796 817 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 C8orf44Q96CB5 159 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 MFSD3Q96ES6 412 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 CNDP1Q96KN2 507 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 IP6K3Q96PC2 410 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 TRIM56Q9BRZ2 755 aaKnown RBP8.55□□□□□ -1.04
GGA3-207ENST00000578896 SYNPO2LQ9H987 977 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 TREX1Q9NSU2 369 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 ABCF3Q9NUQ8 709 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 IL1RAPL1Q9NZN1 696 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 PAK5Q9P286 719 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 ZC3H7BQ9UGR2 993 aaKnown RBP8.55□□□□□ -1.04
GGA3-207ENST00000578896 RIMKLBQ9ULI2 386 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 PCDHGA10Q9Y5H3 936 aa8.55□□□□□ -1.04
GGA3-207ENST00000578896 HYKKA2RU49 373 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 KDM1AO60341 852 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 KLHL18O94889 574 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 VAPBO95292 243 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 F10P00742 488 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 STATHP02808 62 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 ALPPP05187 535 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 ARNTP27540 789 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 PPARGP37231 505 aaPredicted RBP8.54□□□□□ -1.04
GGA3-207ENST00000578896 ARSFP54793 590 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 AIMP2Q13155 320 aaKnown RBP8.54□□□□□ -1.04
GGA3-207ENST00000578896 GRM7Q14831 915 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 RPS6KA1Q15418 735 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 TRIP13Q15645 432 aaPredicted RBP8.54□□□□□ -1.04
GGA3-207ENST00000578896 VWA2Q5GFL6 755 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 ZC3H12BQ5HYM0 836 aaKnown RBP8.54□□□□□ -1.04
GGA3-207ENST00000578896 PRAMEF13Q5VWM6 474 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 FBXO42Q6P3S6 717 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 TTC23LQ6PF05 361 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 SUSD1Q6UWL2 747 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 IGFL3Q6UXB1 125 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 NLRP9Q7RTR0 991 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 OTOAQ7RTW8 1153 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 LAPTM4BQ86VI4 370 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 HPS6Q86YV9 775 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 SHISA5Q8N114 240 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 TTC29Q8NA56 475 aaPredicted RBP8.54□□□□□ -1.04
GGA3-207ENST00000578896 GSDMBQ8TAX9 411 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 DNAJB14Q8TBM8 379 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 RAD51AP1Q96B01 352 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 SLC22A18Q96BI1 424 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 THOC3Q96J01 351 aaKnown RBP8.54□□□□□ -1.04
GGA3-207ENST00000578896 ZNF285Q96NJ3 590 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 YIPF2Q9BWQ6 316 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 TSSK1BQ9BXA7 367 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 INTS7Q9NVH2 962 aaKnown RBP8.54□□□□□ -1.04
GGA3-207ENST00000578896 CUEDC1Q9NWM3 386 aaPredicted RBP8.54□□□□□ -1.04
GGA3-207ENST00000578896 SYBUQ9NX95 663 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 PLA2G3Q9NZ20 509 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 GNPTGQ9UJJ9 305 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 NOVA2Q9UNW9 492 aaKnown RBP8.54□□□□□ -1.04
GGA3-207ENST00000578896 CRYL1Q9Y2S2 319 aa8.54□□□□□ -1.04
GGA3-207ENST00000578896 F8W8V4 182 aa8.53□□□□□ -1.04
GGA3-207ENST00000578896 AVILO75366 819 aa8.53□□□□□ -1.04
GGA3-207ENST00000578896 ONECUT2O95948 504 aa8.53□□□□□ -1.04
GGA3-207ENST00000578896 IGHEP01854 428 aa8.53□□□□□ -1.04
GGA3-207ENST00000578896 ALBP02768 609 aa8.53□□□□□ -1.04
GGA3-207ENST00000578896 RPN2P04844 631 aa8.53□□□□□ -1.04
GGA3-207ENST00000578896 CELA2AP08217 269 aa8.53□□□□□ -1.04
GGA3-207ENST00000578896 CD63P08962 238 aa8.53□□□□□ -1.04
GGA3-207ENST00000578896 TTPAP49638 278 aa8.53□□□□□ -1.04
GGA3-207ENST00000578896 VPS41P49754 854 aa8.53□□□□□ -1.04
GGA3-207ENST00000578896 SOX8P57073 446 aa8.53□□□□□ -1.04
GGA3-207ENST00000578896 SNRPNP63162 240 aaKnown RBP8.53□□□□□ -1.04
GGA3-207ENST00000578896 EEF1A2Q05639 463 aaKnown RBP8.53□□□□□ -1.04
GGA3-207ENST00000578896 KLC1Q07866 573 aa8.53□□□□□ -1.04
GGA3-207ENST00000578896 ELOAQ14241 798 aaKnown RBP8.53□□□□□ -1.04
GGA3-207ENST00000578896 TUBB8Q3ZCM7 444 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms