RNA–Protein interactions for RNA: ENST00000578845.2

CDKN2A-212, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-212ENST00000578845 VPS9D1Q9Y2B5 631 aa21.87■■□□□ 1.09
CDKN2A-212ENST00000578845 NEU2Q9Y3R4 380 aa21.87■■□□□ 1.09
CDKN2A-212ENST00000578845 JRKLQ9Y4A0 524 aa21.87■■□□□ 1.09
CDKN2A-212ENST00000578845 NBPF19A0A087WUL8 3843 aa21.86■■□□□ 1.09
CDKN2A-212ENST00000578845 SPTAN1Q13813 2472 aaKnown RBP21.86■■□□□ 1.09
CDKN2A-212ENST00000578845 MAGEB16A2A368 324 aa21.86■■□□□ 1.09
CDKN2A-212ENST00000578845 KRT87PA6NCN2 255 aa21.86■■□□□ 1.09
CDKN2A-212ENST00000578845 NRDCO43847 1150 aa21.86■■□□□ 1.09
CDKN2A-212ENST00000578845 SRPX2O60687 465 aaPredicted RBP21.86■■□□□ 1.09
CDKN2A-212ENST00000578845 PIM1P11309 404 aaPredicted RBP21.86■■□□□ 1.09
CDKN2A-212ENST00000578845 PKMP14618 531 aaKnown RBP21.86■■□□□ 1.09
CDKN2A-212ENST00000578845 ALAS2P22557 587 aa21.86■■□□□ 1.09
CDKN2A-212ENST00000578845 PSMB5P28074 263 aa21.86■■□□□ 1.09
CDKN2A-212ENST00000578845 VPS41P49754 854 aa21.86■■□□□ 1.09
CDKN2A-212ENST00000578845 MYBPC3Q14896 1274 aa21.86■■□□□ 1.09
CDKN2A-212ENST00000578845 SLC6A19Q695T7 634 aa21.86■■□□□ 1.09
CDKN2A-212ENST00000578845 NEPROQ6NW34 567 aa21.86■■□□□ 1.09
CDKN2A-212ENST00000578845 COX15Q7KZN9 410 aa21.86■■□□□ 1.09
CDKN2A-212ENST00000578845 RNF44Q7L0R7 432 aa21.86■■□□□ 1.09
CDKN2A-212ENST00000578845 GALNT16Q8N428 558 aa21.86■■□□□ 1.09
CDKN2A-212ENST00000578845 EFCAB3Q8N7B9 438 aa21.86■■□□□ 1.09
CDKN2A-212ENST00000578845 PBKQ96KB5 322 aa21.86■■□□□ 1.09
CDKN2A-212ENST00000578845 SELENOSQ9BQE4 189 aa21.86■■□□□ 1.09
CDKN2A-212ENST00000578845 XAB2Q9HCS7 855 aaKnown RBP21.86■■□□□ 1.09
CDKN2A-212ENST00000578845 CRYL1Q9Y2S2 319 aa21.86■■□□□ 1.09
CDKN2A-212ENST00000578845 ANKRD12Q6UB98 2062 aa21.86■■□□□ 1.09
CDKN2A-212ENST00000578845 PCM1Q15154 2024 aa21.85■■□□□ 1.09
CDKN2A-212ENST00000578845 MYO1CO00159 1063 aa21.85■■□□□ 1.09
CDKN2A-212ENST00000578845 KLHL41O60662 606 aa21.85■■□□□ 1.09
CDKN2A-212ENST00000578845 VPS4BO75351 444 aa21.85■■□□□ 1.09
CDKN2A-212ENST00000578845 PSIP1O75475 530 aaKnown RBP21.85■■□□□ 1.09
CDKN2A-212ENST00000578845 MCM3P25205 808 aa21.85■■□□□ 1.09
CDKN2A-212ENST00000578845 MAGEA3P43357 314 aa21.85■■□□□ 1.09
CDKN2A-212ENST00000578845 FOXL2P58012 376 aa21.85■■□□□ 1.09
CDKN2A-212ENST00000578845 NAA25Q14CX7 972 aa21.85■■□□□ 1.09
CDKN2A-212ENST00000578845 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.85■■□□□ 1.09
CDKN2A-212ENST00000578845 IGFL3Q6UXB1 125 aa21.85■■□□□ 1.09
CDKN2A-212ENST00000578845 TMEM151BQ8IW70 566 aa21.85■■□□□ 1.09
CDKN2A-212ENST00000578845 TTC29Q8NA56 475 aaPredicted RBP21.85■■□□□ 1.09
CDKN2A-212ENST00000578845 MAGOHBQ96A72 148 aaKnown RBP21.85■■□□□ 1.09
CDKN2A-212ENST00000578845 SPSB2Q99619 263 aa21.85■■□□□ 1.09
CDKN2A-212ENST00000578845 MIPEPQ99797 713 aa21.85■■□□□ 1.09
CDKN2A-212ENST00000578845 TRIM56Q9BRZ2 755 aaKnown RBP21.85■■□□□ 1.09
CDKN2A-212ENST00000578845 IL1RAPL1Q9NZN1 696 aa21.85■■□□□ 1.09
CDKN2A-212ENST00000578845 SAMD15Q9P1V8 674 aa21.85■■□□□ 1.09
CDKN2A-212ENST00000578845 KLHL42Q9P2K6 505 aa21.85■■□□□ 1.09
CDKN2A-212ENST00000578845 GALPQ9UBC7 116 aa21.85■■□□□ 1.09
CDKN2A-212ENST00000578845 VPS4AQ9UN37 437 aa21.85■■□□□ 1.09
CDKN2A-212ENST00000578845 FAM169AQ9Y6X4 670 aa21.85■■□□□ 1.09
CDKN2A-212ENST00000578845 SHANK1Q9Y566 2161 aa21.84■■□□□ 1.09
CDKN2A-212ENST00000578845 OR2A25A4D2G3 310 aa21.84■■□□□ 1.09
CDKN2A-212ENST00000578845 ARHGEF33A8MVX0 844 aa21.84■■□□□ 1.09
CDKN2A-212ENST00000578845 AGPSO00116 658 aa21.84■■□□□ 1.09
CDKN2A-212ENST00000578845 CHRM3P20309 590 aa21.84■■□□□ 1.09
CDKN2A-212ENST00000578845 MMP11P24347 488 aa21.84■■□□□ 1.09
CDKN2A-212ENST00000578845 CLCN7P51798 805 aa21.84■■□□□ 1.09
CDKN2A-212ENST00000578845 DHX34Q14147 1143 aaKnown RBP21.84■■□□□ 1.09
CDKN2A-212ENST00000578845 ARHGAP19Q14CB8 494 aa21.84■■□□□ 1.09
CDKN2A-212ENST00000578845 NKG7Q16617 165 aa21.84■■□□□ 1.09
CDKN2A-212ENST00000578845 FAM214AQ32MH5 1076 aa21.84■■□□□ 1.09
CDKN2A-212ENST00000578845 ANKRD20A4Q4UJ75 823 aa21.84■■□□□ 1.09
CDKN2A-212ENST00000578845 ACSBG2Q5FVE4 666 aa21.84■■□□□ 1.09
CDKN2A-212ENST00000578845 CASC4Q6P4E1 433 aa21.84■■□□□ 1.09
CDKN2A-212ENST00000578845 NEK10Q6ZWH5 1172 aa21.84■■□□□ 1.09
CDKN2A-212ENST00000578845 OR9A1PQ8NGU1 263 aa21.84■■□□□ 1.09
CDKN2A-212ENST00000578845 SERPINB12Q96P63 405 aa21.84■■□□□ 1.09
CDKN2A-212ENST00000578845 ZNF552Q9H707 407 aaPredicted RBP21.84■■□□□ 1.09
CDKN2A-212ENST00000578845 NXT1Q9UKK6 140 aaKnown RBP21.84■■□□□ 1.09
CDKN2A-212ENST00000578845 CCDC88CQ9P219 2028 aa21.84■■□□□ 1.09
CDKN2A-212ENST00000578845 ZCWPW2A0A1B0GU75 182 aa21.83■■□□□ 1.09
CDKN2A-212ENST00000578845 SDR42E2A6NKP2 422 aa21.83■■□□□ 1.09
CDKN2A-212ENST00000578845 ALPPP05187 535 aa21.83■■□□□ 1.09
CDKN2A-212ENST00000578845 VARSP26640 1264 aaKnown RBP21.83■■□□□ 1.09
CDKN2A-212ENST00000578845 COILP38432 576 aaPredicted RBP21.83■■□□□ 1.09
CDKN2A-212ENST00000578845 UQCRFS1P47985 274 aa21.83■■□□□ 1.09
CDKN2A-212ENST00000578845 TERF1P54274 439 aa21.83■■□□□ 1.09
CDKN2A-212ENST00000578845 RAPSNQ13702 412 aa21.83■■□□□ 1.09
CDKN2A-212ENST00000578845 FASTKQ14296 549 aaKnown RBP21.83■■□□□ 1.09
CDKN2A-212ENST00000578845 INPP5JQ15735 1006 aaPredicted RBP21.83■■□□□ 1.09
CDKN2A-212ENST00000578845 ZNF470Q6ECI4 717 aa21.83■■□□□ 1.09
CDKN2A-212ENST00000578845 FRMPD2BQ6IN97 320 aa21.83■■□□□ 1.09
CDKN2A-212ENST00000578845 FBXO15Q8NCQ5 510 aaPredicted RBP21.83■■□□□ 1.09
CDKN2A-212ENST00000578845 ZNF669Q96BR6 464 aaPredicted RBP21.83■■□□□ 1.09
CDKN2A-212ENST00000578845 FAM136AQ96C01 138 aa21.83■■□□□ 1.09
CDKN2A-212ENST00000578845 MS4A14Q96JA4 679 aa21.83■■□□□ 1.09
CDKN2A-212ENST00000578845 NAP1L3Q99457 506 aaPredicted RBP21.83■■□□□ 1.09
CDKN2A-212ENST00000578845 FAM114A2Q9NRY5 505 aa21.83■■□□□ 1.09
CDKN2A-212ENST00000578845 MED16Q9Y2X0 877 aa21.83■■□□□ 1.09
CDKN2A-212ENST00000578845 NUP210LQ5VU65 1888 aa21.82■■□□□ 1.08
CDKN2A-212ENST00000578845 VSTM2BA6NLU5 285 aa21.82■■□□□ 1.08
CDKN2A-212ENST00000578845 E5RI56 91 aa21.82■■□□□ 1.08
CDKN2A-212ENST00000578845 PHF2O75151 1096 aa21.82■■□□□ 1.08
CDKN2A-212ENST00000578845 IPO13O94829 963 aaKnown RBP21.82■■□□□ 1.08
CDKN2A-212ENST00000578845 VSX2P58304 361 aaPredicted RBP21.82■■□□□ 1.08
CDKN2A-212ENST00000578845 KLHL38Q2WGJ6 581 aa21.82■■□□□ 1.08
CDKN2A-212ENST00000578845 WASHC2DQ5SRD0 308 aa21.82■■□□□ 1.08
CDKN2A-212ENST00000578845 CCDC137Q6PK04 289 aaKnown RBP21.82■■□□□ 1.08
CDKN2A-212ENST00000578845 LMNTD2Q8IXW0 634 aa21.82■■□□□ 1.08
CDKN2A-212ENST00000578845 SMPDL3AQ92484 453 aa21.82■■□□□ 1.08
CDKN2A-212ENST00000578845 KCNJ9Q92806 393 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms