RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 HNRNPRO43390 633 aaKnown RBP10.79□□□□□ -0.68
SKA2-204ENST00000578519 RNGTTO60942 597 aaKnown RBP10.79□□□□□ -0.68
SKA2-204ENST00000578519 KLF8O95600 359 aaPredicted RBP10.79□□□□□ -0.68
SKA2-204ENST00000578519 SLC16A8O95907 504 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 GPIP06744 558 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 C8BP07358 591 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 HOXC4P09017 264 aaPredicted RBP10.79□□□□□ -0.68
SKA2-204ENST00000578519 TBC1D3HP0C7X1 549 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 MYCLP1P12525 358 aaPredicted RBP10.79□□□□□ -0.68
SKA2-204ENST00000578519 BCKDHAP12694 445 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 TCN1P20061 433 aaPredicted RBP10.79□□□□□ -0.68
SKA2-204ENST00000578519 POU3F3P20264 500 aaPredicted RBP10.79□□□□□ -0.68
SKA2-204ENST00000578519 HTR1EP28566 365 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 IMPA1P29218 277 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 TRIM23P36406 574 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 BDKRB1P46663 353 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 METAP1P53582 386 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 MRPS22P82650 360 aaKnown RBP10.79□□□□□ -0.68
SKA2-204ENST00000578519 HMGCS1Q01581 520 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 ACSM2AQ08AH3 577 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 DMPKQ09013 629 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 DOC2AQ14183 400 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 KRT33BQ14525 404 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 TRIP10Q15642 601 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 ZNF658BQ4V348 819 aaPredicted RBP10.79□□□□□ -0.68
SKA2-204ENST00000578519 TIGD2Q4W5G0 525 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 USP39Q53GS9 565 aaKnown RBP10.79□□□□□ -0.68
SKA2-204ENST00000578519 THEMIS2Q5TEJ8 643 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 ATG9BQ674R7 924 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 ACSM2BQ68CK6 577 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 TBC1D3GQ6DHY5 549 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 TBC1D3CQ6IPX1 549 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 CRTC3Q6UUV7 619 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 LCTLQ6UWM7 567 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 FKBP9P1Q75LS8 142 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 RETREG3Q86VR2 466 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 HORMAD1Q86X24 394 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 SLC15A3Q8IY34 581 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 TBC1D21Q8IYX1 336 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 TBC1D3Q8IZP1 549 aaPredicted RBP10.79□□□□□ -0.68
SKA2-204ENST00000578519 TMEM132CQ8N3T6 1108 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 TBC1D19Q8N5T2 526 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 EFCAB3Q8N7B9 438 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 DENND6BQ8NEG7 585 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 OR2T34Q8NGX1 318 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 TFGQ92734 400 aaPredicted RBP10.79□□□□□ -0.68
SKA2-204ENST00000578519 TESCQ96BS2 214 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 PYCR2Q96C36 320 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 WDR34Q96EX3 536 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 CGREF1Q99674 301 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 ECSITQ9BQ95 431 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 SLC17A9Q9BYT1 436 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 ACPTQ9BZG2 426 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 CLMPQ9H6B4 373 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 INTS7Q9NVH2 962 aaKnown RBP10.79□□□□□ -0.68
SKA2-204ENST00000578519 MAGEL2Q9UJ55 1249 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 TSC22D4Q9Y3Q8 395 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 SNX13Q9Y5W8 968 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 HEBP2Q9Y5Z4 205 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 PRORSD1PA6NEY8 169 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 TMEM202A6NGA9 273 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 LRRC72A6NJI9 287 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 K7ESM1 405 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 GSTA4O15217 222 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 PGRP06401 933 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 PCNAP12004 261 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 AMD1P17707 334 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 EPORP19235 508 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 IDSP22304 550 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 SLC6A2P23975 617 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 PSMA4P25789 261 aaKnown RBP10.78□□□□□ -0.68
SKA2-204ENST00000578519 ACADLP28330 430 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 PDHA2P29803 388 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 DPP6P42658 865 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 TRPC1P48995 793 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 MS4A2Q01362 244 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 C2orf27AQ580R0 203 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 TMEM196Q5HYL7 178 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.78□□□□□ -0.68
SKA2-204ENST00000578519 ANXA8L1Q5VT79 327 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 METRNLQ641Q3 311 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 LCN8Q6JVE9 175 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 NANOGP8Q6NSW7 305 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 DOK6Q6PKX4 331 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 TRIM74Q86UV6 250 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 GPR180Q86V85 440 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 SYT12Q8IV01 421 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 RNF148Q8N7C7 305 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 SMRP1Q8NCR6 262 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 DNAJB14Q8TBM8 379 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 ZNF480Q8WV37 535 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 SLC5A11Q8WWX8 675 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 SMPDL3AQ92484 453 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 TMEM125Q96AQ2 219 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 FAM131CQ96AQ9 280 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 VPS33AQ96AX1 596 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 SH3KBP1Q96B97 665 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 GBP5Q96PP8 586 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 BTBD9Q96Q07 612 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 OR52E6Q96RD3 313 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms