RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 EMP2P54851 167 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 CASP6P55212 293 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 GSTM4Q03013 218 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 RBPJQ06330 500 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 GRB7Q14451 532 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 ANKRD20A2Q5SQ80 823 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 ANKRD20A1Q5TYW2 823 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 ANKRD20A3Q5VUR7 823 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 HIBCHQ6NVY1 386 aaPredicted RBP9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 NLRP9Q7RTR0 991 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 TMTC1Q8IUR5 882 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 VRK3Q8IV63 474 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 OR4N4Q8N0Y3 316 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 CFAP61Q8NHU2 1237 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 C14orf79Q96F83 325 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 TBL1YQ9BQ87 522 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 YIPF2Q9BWQ6 316 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 HEMGNQ9BXL5 484 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 GOLPH3Q9H4A6 298 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 STMN3Q9NZ72 180 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 ZNF282Q9UDV7 671 aaPredicted RBP9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 NCOA6Q14686 2063 aaPredicted RBP9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 hCG_1818297A0A087WSY0 165 aa9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 IGHV1-45A0A0A0MS14 117 aa9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 OR51F1A6NGY5 319 aa9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 H7C0S8 307 aa9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 SPOPO43791 374 aa9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 AKR1B10O60218 316 aa9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 OR1I1O60431 355 aa9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 SRPX2O60687 465 aaPredicted RBP9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 PRAMEF2O60811 474 aa9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 ZRANB2O95218 330 aaKnown RBP eCLIP9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 NADKO95544 446 aaPredicted RBP9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 AGAP20933 346 aa9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 CXCR2P25025 360 aa9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 YBX1P67809 324 aaKnown RBP9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 CACNG1Q06432 222 aa9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 PRPSAP1Q14558 356 aa9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 ITPRIPL1Q6GPH6 555 aa9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 CNSTQ6PJW8 725 aa9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 SPPL2CQ8IUH8 684 aa9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 SUN3Q8TAQ9 357 aa9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 CHTF18Q8WVB6 975 aa9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 ZUFSPQ96AP4 578 aa9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 CHP1Q99653 195 aa9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 SPOCK3Q9BQ16 436 aa9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 C19orf43Q9BQ61 176 aa9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 TSPAN10Q9H1Z9 355 aaPredicted RBP9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 ARNT2Q9HBZ2 717 aa9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 MCCC2Q9HCC0 563 aa9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 LUC7LQ9NQ29 371 aaKnown RBP9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 ENAMQ9NRM1 1142 aa9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 SPTLC3Q9NUV7 552 aa9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 INTS7Q9NVH2 962 aaKnown RBP9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 NLE1Q9NVX2 485 aaPredicted RBP9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 PIH1D1Q9NWS0 290 aaKnown RBP9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 MEMO1Q9Y316 297 aa9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 ALG6Q9Y672 507 aa9.63□□□□□ -0.87
NPLOC4-220ENST00000576940 CACNA1CQ13936 2221 aa9.62□□□□□ -0.87
NPLOC4-220ENST00000576940 IGLV3-12A0A075B6K2 115 aa9.62□□□□□ -0.87
NPLOC4-220ENST00000576940 OR5H15A6NDH6 313 aa9.62□□□□□ -0.87
NPLOC4-220ENST00000576940 IQCF5A8MTL0 148 aa9.62□□□□□ -0.87
NPLOC4-220ENST00000576940 A8MUI8 341 aa9.62□□□□□ -0.87
NPLOC4-220ENST00000576940 IDSB3KWA1 339 aa9.62□□□□□ -0.87
NPLOC4-220ENST00000576940 FAM227AF5H4B4 570 aa9.62□□□□□ -0.87
NPLOC4-220ENST00000576940 KDM1AO60341 852 aa9.62□□□□□ -0.87
NPLOC4-220ENST00000576940 S1PR4O95977 384 aa9.62□□□□□ -0.87
NPLOC4-220ENST00000576940 FTH1P02794 183 aa9.62□□□□□ -0.87
NPLOC4-220ENST00000576940 HOXB4P17483 251 aaPredicted RBP9.62□□□□□ -0.87
NPLOC4-220ENST00000576940 FDXRP22570 491 aa9.62□□□□□ -0.87
NPLOC4-220ENST00000576940 CCR7P32248 378 aa9.62□□□□□ -0.87
NPLOC4-220ENST00000576940 MARCKSL1P49006 195 aa9.62□□□□□ -0.87
NPLOC4-220ENST00000576940 CSNK1G2P78368 415 aa9.62□□□□□ -0.87
NPLOC4-220ENST00000576940 ZNF33BQ06732 778 aa9.62□□□□□ -0.87
NPLOC4-220ENST00000576940 HSPA14Q0VDF9 509 aa9.62□□□□□ -0.87
NPLOC4-220ENST00000576940 POU6F1Q14863 301 aa9.62□□□□□ -0.87
NPLOC4-220ENST00000576940 SYTL3Q4VX76 610 aa9.62□□□□□ -0.87
NPLOC4-220ENST00000576940 ZNF766Q5HY98 468 aa9.62□□□□□ -0.87
NPLOC4-220ENST00000576940 PRMT9Q6P2P2 845 aa9.62□□□□□ -0.87
NPLOC4-220ENST00000576940 FBXO42Q6P3S6 717 aa9.62□□□□□ -0.87
NPLOC4-220ENST00000576940 RHOT2Q8IXI1 618 aa9.62□□□□□ -0.87
NPLOC4-220ENST00000576940 RCOR2Q8IZ40 523 aa9.62□□□□□ -0.87
NPLOC4-220ENST00000576940 OR2L8Q8NGY9 312 aa9.62□□□□□ -0.87
NPLOC4-220ENST00000576940 SLC22A18Q96BI1 424 aa9.62□□□□□ -0.87
NPLOC4-220ENST00000576940 FAM118BQ9BPY3 351 aa9.62□□□□□ -0.87
NPLOC4-220ENST00000576940 ENKD1Q9H0I2 346 aa9.62□□□□□ -0.87
NPLOC4-220ENST00000576940 SLC39A10Q9ULF5 831 aa9.62□□□□□ -0.87
NPLOC4-220ENST00000576940 ZNF835Q9Y2P0 537 aa9.62□□□□□ -0.87
NPLOC4-220ENST00000576940 NIPBLQ6KC79 2804 aaeCLIP9.62□□□□□ -0.87
NPLOC4-220ENST00000576940 SPG11Q96JI7 2443 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 CCDC162PA2VCL2 907 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 KRT87PA6NCN2 255 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 TARM1B6A8C7 271 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 NPIPA5E9PKD4 350 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 HEXBP07686 556 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 OR56A5P0C7T3 313 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 FBLP22087 321 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 MSNP26038 577 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 PSMB5P28074 263 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms