RNA–Protein interactions for RNA: ENST00000576502.5

NDE1-211, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-211ENST00000576502 ELK3P41970 407 aa13.29□□□□□ -0.28
NDE1-211ENST00000576502 GABRA4P48169 554 aa13.29□□□□□ -0.28
NDE1-211ENST00000576502 CARSP49589 748 aaKnown RBP13.29□□□□□ -0.28
NDE1-211ENST00000576502 PNLIPRP1P54315 467 aa13.29□□□□□ -0.28
NDE1-211ENST00000576502 RRADP55042 308 aa13.29□□□□□ -0.28
NDE1-211ENST00000576502 ETF1P62495 437 aaKnown RBP13.29□□□□□ -0.28
NDE1-211ENST00000576502 SP140Q13342 867 aa13.29□□□□□ -0.28
NDE1-211ENST00000576502 CUL1Q13616 776 aa13.29□□□□□ -0.28
NDE1-211ENST00000576502 TSTA3Q13630 321 aaPredicted RBP13.29□□□□□ -0.28
NDE1-211ENST00000576502 FRG1Q14331 258 aaKnown RBP13.29□□□□□ -0.28
NDE1-211ENST00000576502 FAM214AQ32MH5 1076 aa13.29□□□□□ -0.28
NDE1-211ENST00000576502 PTCHD3Q3KNS1 767 aa13.29□□□□□ -0.28
NDE1-211ENST00000576502 PRAMEF17Q5VTA0 474 aa13.29□□□□□ -0.28
NDE1-211ENST00000576502 MYO1HQ8N1T3 1032 aa13.29□□□□□ -0.28
NDE1-211ENST00000576502 AGGF1Q8N302 714 aaeCLIP13.29□□□□□ -0.28
NDE1-211ENST00000576502 OR2L3Q8NG85 312 aa13.29□□□□□ -0.28
NDE1-211ENST00000576502 CD200R1Q8TD46 325 aa13.29□□□□□ -0.28
NDE1-211ENST00000576502 MCOLN3Q8TDD5 553 aa13.29□□□□□ -0.28
NDE1-211ENST00000576502 MIPEPQ99797 713 aa13.29□□□□□ -0.28
NDE1-211ENST00000576502 TRIM51Q9BSJ1 452 aa13.29□□□□□ -0.28
NDE1-211ENST00000576502 TRIM31Q9BZY9 425 aa13.29□□□□□ -0.28
NDE1-211ENST00000576502 SPRTNQ9H040 489 aaPredicted RBP13.29□□□□□ -0.28
NDE1-211ENST00000576502 MRPS30Q9NP92 439 aaKnown RBP13.29□□□□□ -0.28
NDE1-211ENST00000576502 NSMCE4AQ9NXX6 385 aa13.29□□□□□ -0.28
NDE1-211ENST00000576502 IFT80Q9P2H3 777 aaPredicted RBP13.29□□□□□ -0.28
NDE1-211ENST00000576502 TCFL5Q9UL49 500 aa13.29□□□□□ -0.28
NDE1-211ENST00000576502 CHMP2BQ9UQN3 213 aa13.29□□□□□ -0.28
NDE1-211ENST00000576502 ATMQ13315 3056 aa13.29□□□□□ -0.28
NDE1-211ENST00000576502 A0A1B0GX78 115 aa13.28□□□□□ -0.28
NDE1-211ENST00000576502 SLC28A2O43868 658 aa13.28□□□□□ -0.28
NDE1-211ENST00000576502 PRICKLE3O43900 615 aaPredicted RBP13.28□□□□□ -0.28
NDE1-211ENST00000576502 HIST1H2AGP0C0S8 130 aaPredicted RBP13.28□□□□□ -0.28
NDE1-211ENST00000576502 HIST1H2ADP20671 130 aa13.28□□□□□ -0.28
NDE1-211ENST00000576502 GRIA3P42263 894 aa13.28□□□□□ -0.28
NDE1-211ENST00000576502 ABATP80404 500 aa13.28□□□□□ -0.28
NDE1-211ENST00000576502 PDAP1Q13442 181 aaKnown RBP13.28□□□□□ -0.28
NDE1-211ENST00000576502 MSS51Q4VC12 460 aa13.28□□□□□ -0.28
NDE1-211ENST00000576502 LACTB2Q53H82 288 aaPredicted RBP13.28□□□□□ -0.28
NDE1-211ENST00000576502 ATP1A1-AS1Q5TC04 95 aa13.28□□□□□ -0.28
NDE1-211ENST00000576502 THEMIS2Q5TEJ8 643 aa13.28□□□□□ -0.28
NDE1-211ENST00000576502 ZNF549Q6P9A3 640 aa13.28□□□□□ -0.28
NDE1-211ENST00000576502 FAM198BQ6UWH4 519 aa13.28□□□□□ -0.28
NDE1-211ENST00000576502 ATG14Q6ZNE5 492 aa13.28□□□□□ -0.28
NDE1-211ENST00000576502 UBE2R2Q712K3 238 aaPredicted RBP13.28□□□□□ -0.28
NDE1-211ENST00000576502 PRICKLE2Q7Z3G6 844 aa13.28□□□□□ -0.28
NDE1-211ENST00000576502 APLFQ8IW19 511 aaPredicted RBP13.28□□□□□ -0.28
NDE1-211ENST00000576502 CPNE9Q8IYJ1 553 aa13.28□□□□□ -0.28
NDE1-211ENST00000576502 ASB11Q8WXH4 323 aa13.28□□□□□ -0.28
NDE1-211ENST00000576502 VPS50Q96JG6 964 aa13.28□□□□□ -0.28
NDE1-211ENST00000576502 HIST1H2AHQ96KK5 128 aa13.28□□□□□ -0.28
NDE1-211ENST00000576502 HIST1H2AJQ99878 128 aa13.28□□□□□ -0.28
NDE1-211ENST00000576502 H2AFJQ9BTM1 129 aa13.28□□□□□ -0.28
NDE1-211ENST00000576502 TRIM54Q9BYV2 358 aa13.28□□□□□ -0.28
NDE1-211ENST00000576502 PCBD2Q9H0N5 130 aa13.28□□□□□ -0.28
NDE1-211ENST00000576502 RAB17Q9H0T7 212 aa13.28□□□□□ -0.28
NDE1-211ENST00000576502 ACSS2Q9NR19 701 aa13.28□□□□□ -0.28
NDE1-211ENST00000576502 ZFATQ9P243 1243 aa13.28□□□□□ -0.28
NDE1-211ENST00000576502 GALPQ9UBC7 116 aa13.28□□□□□ -0.28
NDE1-211ENST00000576502 UTP11Q9Y3A2 253 aaKnown RBP13.28□□□□□ -0.28
NDE1-211ENST00000576502 HEATR5BQ9P2D3 2071 aa13.27□□□□□ -0.28
NDE1-211ENST00000576502 GFYI3L273 518 aa13.27□□□□□ -0.29
NDE1-211ENST00000576502 TXNDC9O14530 226 aa13.27□□□□□ -0.29
NDE1-211ENST00000576502 SLC16A5O15375 505 aa13.27□□□□□ -0.29
NDE1-211ENST00000576502 KLHL41O60662 606 aa13.27□□□□□ -0.29
NDE1-211ENST00000576502 BANF1O75531 89 aa13.27□□□□□ -0.29
NDE1-211ENST00000576502 PLA2G2AP14555 144 aa13.27□□□□□ -0.29
NDE1-211ENST00000576502 ALAS2P22557 587 aa13.27□□□□□ -0.29
NDE1-211ENST00000576502 HRH2P25021 359 aa13.27□□□□□ -0.29
NDE1-211ENST00000576502 MCM3P25205 808 aa13.27□□□□□ -0.29
NDE1-211ENST00000576502 FOLR3P41439 243 aa13.27□□□□□ -0.29
NDE1-211ENST00000576502 IL2P60568 153 aa13.27□□□□□ -0.29
NDE1-211ENST00000576502 RPS18P62269 152 aaKnown RBP13.27□□□□□ -0.29
NDE1-211ENST00000576502 CKAP4Q07065 602 aaKnown RBP13.27□□□□□ -0.29
NDE1-211ENST00000576502 PDIA2Q13087 525 aaKnown RBP13.27□□□□□ -0.29
NDE1-211ENST00000576502 CCSMST1Q4G0I0 132 aa13.27□□□□□ -0.29
NDE1-211ENST00000576502 NKAIN1Q4KMZ8 207 aa13.27□□□□□ -0.29
NDE1-211ENST00000576502 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.27□□□□□ -0.29
NDE1-211ENST00000576502 MLIPQ5VWP3 458 aa13.27□□□□□ -0.29
NDE1-211ENST00000576502 STEAP4Q687X5 459 aa13.27□□□□□ -0.29
NDE1-211ENST00000576502 FCRL6Q6DN72 434 aa13.27□□□□□ -0.29
NDE1-211ENST00000576502 FAM45BPQ6NSW5 357 aa13.27□□□□□ -0.29
NDE1-211ENST00000576502 FAM20CQ8IXL6 584 aa13.27□□□□□ -0.29
NDE1-211ENST00000576502 C17orf53Q8N3J3 647 aaPredicted RBP13.27□□□□□ -0.29
NDE1-211ENST00000576502 GPATCH11Q8N954 259 aa13.27□□□□□ -0.29
NDE1-211ENST00000576502 TMEM102Q8N9M5 508 aaPredicted RBP13.27□□□□□ -0.29
NDE1-211ENST00000576502 SPATA4Q8NEY3 305 aa13.27□□□□□ -0.29
NDE1-211ENST00000576502 OR2A1Q8NGT9 310 aa13.27□□□□□ -0.29
NDE1-211ENST00000576502 GIMAP7Q8NHV1 300 aa13.27□□□□□ -0.29
NDE1-211ENST00000576502 FAM45AQ8TCE6 357 aa13.27□□□□□ -0.29
NDE1-211ENST00000576502 CCDC138Q96M89 665 aa13.27□□□□□ -0.29
NDE1-211ENST00000576502 GBP5Q96PP8 586 aa13.27□□□□□ -0.29
NDE1-211ENST00000576502 PKP4Q99569 1192 aa13.27□□□□□ -0.29
NDE1-211ENST00000576502 NDNQ99608 321 aa13.27□□□□□ -0.29
NDE1-211ENST00000576502 ZFYVE21Q9BQ24 234 aa13.27□□□□□ -0.29
NDE1-211ENST00000576502 ERP44Q9BS26 406 aa13.27□□□□□ -0.29
NDE1-211ENST00000576502 AKIRIN1Q9H9L7 192 aaPredicted RBP13.27□□□□□ -0.29
NDE1-211ENST00000576502 WHRNQ9P202 907 aa13.27□□□□□ -0.29
NDE1-211ENST00000576502 KLHL20Q9Y2M5 609 aa13.27□□□□□ -0.29
NDE1-211ENST00000576502 SNX24Q9Y343 169 aa13.27□□□□□ -0.29
NDE1-211ENST00000576502 TEX264Q9Y6I9 313 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms