RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 BARD1Q99728 777 aaKnown RBP12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 NMUR1Q9HB89 426 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 PAK6Q9NQU5 681 aaPredicted RBP12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 DHRS7Q9Y394 339 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 ZSCAN5BA6NJL1 495 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 DLGAP1O14490 977 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 MATN4O95460 622 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 CXCR2P25025 360 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 PTPRCAPQ14761 206 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 PTGR1Q14914 329 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 SLC37A3Q8NCC5 494 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 SLC16A10Q8TF71 515 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 SLC30A3Q99726 388 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 GSDMCQ9BYG8 508 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 PDLIM7Q9NR12 457 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 PCDHGA3Q9Y5H0 932 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 PLOD2O00469 737 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 SPAM1P38567 509 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 MLLT6P55198 1093 aaPredicted RBP12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 CASP9P55211 416 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 MTAPQ13126 283 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 KCNA10Q16322 511 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 OSTM1Q86WC4 334 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 MMAAQ8IVH4 418 aaKnown RBP12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 GRIN3AQ8TCU5 1115 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 FCRL4Q96PJ5 515 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 MTERF1Q99551 399 aaKnown RBP12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 SDR39U1Q9NRG7 319 aaPredicted RBP12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 FLRT1Q9NZU1 646 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 ANKMY1Q9P2S6 941 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 HOXA2O43364 376 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 ERAL1O75616 437 aaKnown RBP12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 WEE1P30291 646 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 GDF5P43026 501 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 APOFQ13790 326 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 TAZQ16635 292 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 ENPP6Q6UWR7 440 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 ZNF382Q96SR6 550 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 POPDC3Q9HBV1 291 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 NFKBIL1Q9UBC1 381 aaPredicted RBP12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 TLR4O00206 839 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 JUNP05412 331 aaKnown RBP12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 IL7P13232 177 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 BTBD16Q32M84 506 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 RFTN2Q52LD8 501 aaPredicted RBP12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 ATG9BQ674R7 924 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 ASB18Q6ZVZ8 466 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 NDNFQ8TB73 568 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 TMEM125Q96AQ2 219 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 C12orf42Q96LP6 360 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 CEP295NLQ96MC4 621 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 ERMAPQ96PL5 475 aaPredicted RBP12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 FAIM2Q9BWQ8 316 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 GPN2Q9H9Y4 310 aaPredicted RBP12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 AKAP11Q9UKA4 1901 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 GSAPA4D1B5 854 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 LOC730098B7Z3J9 87 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 COQ9O75208 318 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 MATN1P21941 496 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 CD52P31358 61 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 TARDBPQ13148 414 aaKnown RBP eCLIP12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 DUOXA1Q1HG43 343 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 KCNN2Q9H2S1 579 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 TP63Q9H3D4 680 aaPredicted RBP12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 GPN1Q9HCN4 374 aaPredicted RBP12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 TMLHEQ9NVH6 421 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 ERVK13-1Q9NX77 482 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 CACNG4Q9UBN1 327 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 CMAHPQ9Y471 501 aa12.81□□□□□ -0.36
PCDHGB3-201ENST00000576222 TREHO43280 583 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 UPK1BO75841 260 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 S1PR4O95977 384 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 AGXTP21549 392 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 CSTF1Q05048 431 aaKnown RBP12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 ZNF697Q5TEC3 545 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 XKRXQ6PP77 449 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 ZNF730Q6ZMV8 503 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 MTMR14Q8NCE2 650 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 MAPKAP1Q9BPZ7 522 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 NSUN3Q9H649 340 aaKnown RBP12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 EVLQ9UI08 416 aaPredicted RBP12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 ACOT8O14734 319 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 AQP9O43315 295 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 GLUD1P00367 558 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 GGT1P19440 569 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 GPX3P22352 226 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 CLCN4P51793 760 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 IDNKQ5T6J7 187 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 UBE2UQ5VVX9 321 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 CAPN13Q6MZZ7 669 aaPredicted RBP12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 PNCKQ6P2M8 343 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 CXCL17Q6UXB2 119 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 ISCA2Q86U28 154 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 AMIGO1Q86WK6 493 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 ZFAND4Q86XD8 727 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 FRS2Q8WU20 508 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 SMOQ99835 787 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 ACAT2Q9BWD1 397 aa12.8□□□□□ -0.36
PCDHGB3-201ENST00000576222 FNIP2Q9P278 1114 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms