RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 PLEKHS1Q5SXH7 462 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 SPOUT1Q5T280 376 aaKnown RBP8.7□□□□□ -1.02
NCBP3-204ENST00000574911 DOK6Q6PKX4 331 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 SERPINA11Q86U17 422 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 PGBD3Q8N328 593 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 ELMOD1Q8N336 334 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 BPIFB6Q8NFQ5 453 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 AUTS2Q8WXX7 1259 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 ZNF566Q969W8 418 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 FKBP10Q96AY3 582 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 TMEM169Q96HH4 297 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 HIST1H2AHQ96KK5 128 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 ZNF558Q96NG5 402 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 HIST1H2AJQ99878 128 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 H2AFJQ9BTM1 129 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 CPEB1Q9BZB8 566 aaKnown RBP8.7□□□□□ -1.02
NCBP3-204ENST00000574911 TBC1D23Q9NUY8 699 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 THG1LQ9NWX6 298 aaKnown RBP8.7□□□□□ -1.02
NCBP3-204ENST00000574911 MAFFQ9ULX9 164 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 BRCA2P51587 3418 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 RFXANKO14593 260 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 E2F6O75461 281 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 DNAJB5O75953 348 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 LRATO95237 230 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 URODP06132 367 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 ITIH1P19827 911 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 PCMT1P22061 227 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 GABRR2P28476 465 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 TRPC1P48995 793 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 SPINT3P49223 89 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 RAD23AP54725 363 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 PIGFQ07326 219 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 HSPA14Q0VDF9 509 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 NOGQ13253 232 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 CDK5R2Q13319 367 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 SLC14A1Q13336 389 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 CARD16Q5EG05 197 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 ZDHHC20Q5W0Z9 365 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 CPZQ66K79 652 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 OR4F3Q6IEY1 312 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 NOXRED1Q6NXP6 359 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 DUS1LQ6P1R4 473 aaKnown RBP8.69□□□□□ -1.02
NCBP3-204ENST00000574911 C22orf39Q6P5X5 142 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 GAREM2Q75VX8 874 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 RASGRP3Q8IV61 690 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 ZDHHC21Q8IVQ6 265 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 SMYD1Q8NB12 490 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 SLAIN1Q8ND83 568 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 MIPOL1Q8TD10 442 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 NELL1Q92832 810 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 ABTB1Q969K4 478 aaPredicted RBP8.69□□□□□ -1.02
NCBP3-204ENST00000574911 PYCR2Q96C36 320 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 MAGEB10Q96LZ2 347 aaPredicted RBP8.69□□□□□ -1.02
NCBP3-204ENST00000574911 P2RY13Q9BPV8 354 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 CFHR5Q9BXR6 569 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 TRIT1Q9H3H1 467 aaKnown RBP8.69□□□□□ -1.02
NCBP3-204ENST00000574911 DNAJC11Q9NVH1 559 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 PAK1IP1Q9NWT1 392 aaPredicted RBP8.69□□□□□ -1.02
NCBP3-204ENST00000574911 RHBDL2Q9NX52 303 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 FBXO10Q9UK96 956 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 SAMD4AQ9UPU9 718 aaKnown RBP8.69□□□□□ -1.02
NCBP3-204ENST00000574911 HS3ST2Q9Y278 367 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 BCKDKO14874 412 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 BCL10O95999 233 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 SEMG1P04279 462 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 CCDC159P0C7I6 412 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 JUPP14923 745 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 CYP2A7P20853 494 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 WNT3P56703 355 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 C21orf59P57076 290 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 DUOXA1Q1HG43 343 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 FRG2Q64ET8 278 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 TMC8Q8IU68 726 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 HS6ST3Q8IZP7 471 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 OR10Q1Q8NGQ4 319 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 MRPS31Q92665 395 aaKnown RBP8.69□□□□□ -1.02
NCBP3-204ENST00000574911 PLEKHA8Q96JA3 519 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 EGLN2Q96KS0 407 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 APOLD1Q96LR9 279 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 FRG2BQ96QU4 278 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 SLC22A14Q9Y267 594 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 ORC6Q9Y5N6 252 aa8.69□□□□□ -1.02
NCBP3-204ENST00000574911 NRG2O14511 850 aaPredicted RBP8.68□□□□□ -1.02
NCBP3-204ENST00000574911 SCN2BO60939 215 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 MITFO75030 526 aaPredicted RBP8.68□□□□□ -1.02
NCBP3-204ENST00000574911 C1QCP02747 245 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 CKMP06732 381 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 ATP1B2P14415 290 aaPredicted RBP8.68□□□□□ -1.02
NCBP3-204ENST00000574911 PRPS1L1P21108 318 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 KIR3DL1P43629 444 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 AP1S2P56377 157 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 RAB15P59190 212 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 PFN3P60673 137 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 SLC16A12Q6ZSM3 486 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 NEK10Q6ZWH5 1172 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 CYP2U1Q7Z449 544 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 DDX53Q86TM3 631 aaKnown RBP8.68□□□□□ -1.02
NCBP3-204ENST00000574911 CYP4Z1Q86W10 505 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 ZZZ3Q8IYH5 903 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 SLC22A15Q8IZD6 547 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms