RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 ANKRD12Q6UB98 2062 aa20.24■□□□□ 0.83
CHRNB1-206ENST00000574054 TARM1B6A8C7 271 aa20.24■□□□□ 0.83
CHRNB1-206ENST00000574054 H3BMM5 538 aa20.24■□□□□ 0.83
CHRNB1-206ENST00000574054 AGPSO00116 658 aa20.24■□□□□ 0.83
CHRNB1-206ENST00000574054 PRICKLE3O43900 615 aaPredicted RBP20.24■□□□□ 0.83
CHRNB1-206ENST00000574054 KLHL41O60662 606 aa20.24■□□□□ 0.83
CHRNB1-206ENST00000574054 VARSP26640 1264 aaKnown RBP20.24■□□□□ 0.83
CHRNB1-206ENST00000574054 OR1D4P47884 311 aa20.24■□□□□ 0.83
CHRNB1-206ENST00000574054 TYSND1Q2T9J0 566 aa20.24■□□□□ 0.83
CHRNB1-206ENST00000574054 PLEKHN1Q494U1 663 aaPredicted RBP20.24■□□□□ 0.83
CHRNB1-206ENST00000574054 SHISA6Q6ZSJ9 500 aa20.24■□□□□ 0.83
CHRNB1-206ENST00000574054 MAGEC3Q8TD91 643 aa20.24■□□□□ 0.83
CHRNB1-206ENST00000574054 ILKAPQ9H0C8 392 aaPredicted RBP20.24■□□□□ 0.83
CHRNB1-206ENST00000574054 SOX17Q9H6I2 414 aaPredicted RBP20.24■□□□□ 0.83
CHRNB1-206ENST00000574054 B3GNT3Q9Y2A9 372 aa20.24■□□□□ 0.83
CHRNB1-206ENST00000574054 CRYL1Q9Y2S2 319 aa20.24■□□□□ 0.83
CHRNB1-206ENST00000574054 ALOX12BO75342 701 aa20.23■□□□□ 0.83
CHRNB1-206ENST00000574054 AVILO75366 819 aa20.23■□□□□ 0.83
CHRNB1-206ENST00000574054 IPO13O94829 963 aaKnown RBP20.23■□□□□ 0.83
CHRNB1-206ENST00000574054 ESR1P03372 595 aa20.23■□□□□ 0.83
CHRNB1-206ENST00000574054 CHRM3P20309 590 aa20.23■□□□□ 0.83
CHRNB1-206ENST00000574054 MMP11P24347 488 aa20.23■□□□□ 0.83
CHRNB1-206ENST00000574054 ITGA3P26006 1051 aa20.23■□□□□ 0.83
CHRNB1-206ENST00000574054 SARNPP82979 210 aaKnown RBP20.23■□□□□ 0.83
CHRNB1-206ENST00000574054 GPS1Q13098 491 aa20.23■□□□□ 0.83
CHRNB1-206ENST00000574054 MRPL49Q13405 166 aaKnown RBP20.23■□□□□ 0.83
CHRNB1-206ENST00000574054 NKG7Q16617 165 aa20.23■□□□□ 0.83
CHRNB1-206ENST00000574054 WASHC2DQ5SRD0 308 aa20.23■□□□□ 0.83
CHRNB1-206ENST00000574054 ZNF662Q6ZS27 426 aa20.23■□□□□ 0.83
CHRNB1-206ENST00000574054 COX15Q7KZN9 410 aa20.23■□□□□ 0.83
CHRNB1-206ENST00000574054 IQCKQ8N0W5 287 aa20.23■□□□□ 0.83
CHRNB1-206ENST00000574054 PRELID2Q8N945 189 aa20.23■□□□□ 0.83
CHRNB1-206ENST00000574054 OR2L3Q8NG85 312 aa20.23■□□□□ 0.83
CHRNB1-206ENST00000574054 HMGCLL1Q8TB92 370 aa20.23■□□□□ 0.83
CHRNB1-206ENST00000574054 TM9SF4Q92544 642 aa20.23■□□□□ 0.83
CHRNB1-206ENST00000574054 C19orf60Q96EN9 201 aa20.23■□□□□ 0.83
CHRNB1-206ENST00000574054 TCF12Q99081 682 aa20.23■□□□□ 0.83
CHRNB1-206ENST00000574054 ZNF552Q9H707 407 aaPredicted RBP20.23■□□□□ 0.83
CHRNB1-206ENST00000574054 WDR54Q9H977 334 aa20.23■□□□□ 0.83
CHRNB1-206ENST00000574054 SPATA7Q9P0W8 599 aa20.23■□□□□ 0.83
CHRNB1-206ENST00000574054 SAMD15Q9P1V8 674 aa20.23■□□□□ 0.83
CHRNB1-206ENST00000574054 CTSFQ9UBX1 484 aa20.23■□□□□ 0.83
CHRNB1-206ENST00000574054 MAU2Q9Y6X3 613 aa20.23■□□□□ 0.83
CHRNB1-206ENST00000574054 ICE1Q9Y2F5 2266 aa20.23■□□□□ 0.83
CHRNB1-206ENST00000574054 A0A0J9YVX5 310 aa20.22■□□□□ 0.83
CHRNB1-206ENST00000574054 TCP11X1B4DZS4 312 aa20.22■□□□□ 0.83
CHRNB1-206ENST00000574054 E5RI56 91 aa20.22■□□□□ 0.83
CHRNB1-206ENST00000574054 NRP2O60462 931 aa20.22■□□□□ 0.83
CHRNB1-206ENST00000574054 ALBP02768 609 aa20.22■□□□□ 0.83
CHRNB1-206ENST00000574054 EIF2S1P05198 315 aaKnown RBP20.22■□□□□ 0.83
CHRNB1-206ENST00000574054 PAMP19021 973 aa20.22■□□□□ 0.83
CHRNB1-206ENST00000574054 ATP5DP30049 168 aa20.22■□□□□ 0.83
CHRNB1-206ENST00000574054 AIMP2Q13155 320 aaKnown RBP20.22■□□□□ 0.83
CHRNB1-206ENST00000574054 TSTA3Q13630 321 aaPredicted RBP20.22■□□□□ 0.83
CHRNB1-206ENST00000574054 FASTKQ14296 549 aaKnown RBP20.22■□□□□ 0.83
CHRNB1-206ENST00000574054 KCNJ11Q14654 390 aa20.22■□□□□ 0.83
CHRNB1-206ENST00000574054 FAM214AQ32MH5 1076 aa20.22■□□□□ 0.83
CHRNB1-206ENST00000574054 KIAA0930Q6ICG6 404 aaPredicted RBP20.22■□□□□ 0.83
CHRNB1-206ENST00000574054 FRMPD2BQ6IN97 320 aa20.22■□□□□ 0.83
CHRNB1-206ENST00000574054 ZADH2Q8N4Q0 377 aa20.22■□□□□ 0.83
CHRNB1-206ENST00000574054 DTWD1Q8N5C7 304 aa20.22■□□□□ 0.83
CHRNB1-206ENST00000574054 CISD2Q8N5K1 135 aaKnown RBP20.22■□□□□ 0.83
CHRNB1-206ENST00000574054 ZNF285Q96NJ3 590 aa20.22■□□□□ 0.83
CHRNB1-206ENST00000574054 ACAT2Q9BWD1 397 aa20.22■□□□□ 0.83
CHRNB1-206ENST00000574054 SLC6A20Q9NP91 592 aa20.22■□□□□ 0.83
CHRNB1-206ENST00000574054 IL1RAPL1Q9NZN1 696 aa20.22■□□□□ 0.83
CHRNB1-206ENST00000574054 NXT1Q9UKK6 140 aaKnown RBP20.22■□□□□ 0.83
CHRNB1-206ENST00000574054 HYKKA2RU49 373 aa20.21■□□□□ 0.83
CHRNB1-206ENST00000574054 FITM1A5D6W6 292 aa20.21■□□□□ 0.83
CHRNB1-206ENST00000574054 SRPX2O60687 465 aaPredicted RBP20.21■□□□□ 0.83
CHRNB1-206ENST00000574054 ERVK-10P10266 1014 aa20.21■□□□□ 0.83
CHRNB1-206ENST00000574054 OGNP20774 298 aaKnown RBP20.21■□□□□ 0.83
CHRNB1-206ENST00000574054 CMPK1P30085 196 aa20.21■□□□□ 0.83
CHRNB1-206ENST00000574054 RBBP7Q16576 425 aa20.21■□□□□ 0.83
CHRNB1-206ENST00000574054 EIF2S3LQ2VIR3 472 aaKnown RBP20.21■□□□□ 0.83
CHRNB1-206ENST00000574054 ACSBG2Q5FVE4 666 aa20.21■□□□□ 0.83
CHRNB1-206ENST00000574054 NEPROQ6NW34 567 aa20.21■□□□□ 0.83
CHRNB1-206ENST00000574054 OR2A1Q8NGT9 310 aa20.21■□□□□ 0.83
CHRNB1-206ENST00000574054 OR9A1PQ8NGU1 263 aa20.21■□□□□ 0.83
CHRNB1-206ENST00000574054 SNRNP40Q96DI7 357 aaKnown RBP20.21■□□□□ 0.83
CHRNB1-206ENST00000574054 SPSB2Q99619 263 aa20.21■□□□□ 0.83
CHRNB1-206ENST00000574054 TRIM56Q9BRZ2 755 aaKnown RBP20.21■□□□□ 0.83
CHRNB1-206ENST00000574054 SLC26A1Q9H2B4 701 aa20.21■□□□□ 0.83
CHRNB1-206ENST00000574054 GALPQ9UBC7 116 aa20.21■□□□□ 0.83
CHRNB1-206ENST00000574054 ZC3H7BQ9UGR2 993 aaKnown RBP20.21■□□□□ 0.83
CHRNB1-206ENST00000574054 TEX15Q9BXT5 2789 aa20.21■□□□□ 0.83
CHRNB1-206ENST00000574054 LOC105369274A0A096LPK9 316 aa20.2■□□□□ 0.82
CHRNB1-206ENST00000574054 LOC102723532A0A0G2JNH3 316 aa20.2■□□□□ 0.82
CHRNB1-206ENST00000574054 A0A1W2PPV9 198 aa20.2■□□□□ 0.82
CHRNB1-206ENST00000574054 ARHGEF33A8MVX0 844 aa20.2■□□□□ 0.82
CHRNB1-206ENST00000574054 SOCS6O14544 535 aa20.2■□□□□ 0.82
CHRNB1-206ENST00000574054 SEMA7AO75326 666 aa20.2■□□□□ 0.82
CHRNB1-206ENST00000574054 MATN4O95460 622 aa20.2■□□□□ 0.82
CHRNB1-206ENST00000574054 ONECUT2O95948 504 aa20.2■□□□□ 0.82
CHRNB1-206ENST00000574054 KRT14P02533 472 aa20.2■□□□□ 0.82
CHRNB1-206ENST00000574054 RPA3P35244 121 aaPredicted RBP20.2■□□□□ 0.82
CHRNB1-206ENST00000574054 GBX1Q14549 363 aa20.2■□□□□ 0.82
CHRNB1-206ENST00000574054 NR6A1Q15406 480 aa20.2■□□□□ 0.82
CHRNB1-206ENST00000574054 ANKRD20A4Q4UJ75 823 aa20.2■□□□□ 0.82
CHRNB1-206ENST00000574054 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms