RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 CCNDBP1O95273 360 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 CCDC166P0CW27 439 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 CMPK1P30085 196 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 SLC5A2P31639 672 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 RPA3P35244 121 aaPredicted RBP10.64□□□□□ -0.71
CHD3-216ENST00000573936 SLC26A3P40879 764 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 UCNP55089 124 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 PCBP4P57723 403 aaKnown RBP10.64□□□□□ -0.71
CHD3-216ENST00000573936 ATP6V0D1P61421 351 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 FOXM1Q08050 763 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 SF1Q15637 639 aaKnown RBP10.64□□□□□ -0.71
CHD3-216ENST00000573936 ZKSCAN8Q15776 578 aaPredicted RBP10.64□□□□□ -0.71
CHD3-216ENST00000573936 MROH9Q5TGP6 573 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 FBXO38Q6PIJ6 1188 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 TMEM207Q6UWW9 146 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 CEP97Q8IW35 865 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 SYTL1Q8IYJ3 562 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 C2orf73Q8N5S3 287 aaPredicted RBP10.64□□□□□ -0.71
CHD3-216ENST00000573936 C19orf47Q8N9M1 422 aaKnown RBP10.64□□□□□ -0.71
CHD3-216ENST00000573936 LMNTD1Q8N9Z9 388 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 ZNF248Q8NDW4 579 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 OR8K5Q8NH50 307 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 AENQ8WTP8 325 aaKnown RBP10.64□□□□□ -0.71
CHD3-216ENST00000573936 ZUFSPQ96AP4 578 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 MRRFQ96E11 262 aaKnown RBP10.64□□□□□ -0.71
CHD3-216ENST00000573936 NAF1Q96HR8 494 aaKnown RBP10.64□□□□□ -0.71
CHD3-216ENST00000573936 FCRL4Q96PJ5 515 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 OR6C1Q96RD1 312 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 PAFAH2Q99487 392 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 NRTNQ99748 197 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 CHRNA10Q9GZZ6 450 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 CAB39LQ9H9S4 337 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 SIDT1Q9NXL6 827 aaKnown RBP10.64□□□□□ -0.71
CHD3-216ENST00000573936 CTNNAL1Q9UBT7 734 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 CIDEBQ9UHD4 219 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 TLK1Q9UKI8 766 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 ADAMTS6Q9UKP5 1117 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 ACSL6Q9UKU0 697 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 RARRES3Q9UL19 164 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 UNC13CQ8NB66 2214 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 A0A087X1B8 175 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 UQCRHLA0A096LP55 91 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 EXOC1LA0A1B0GW35 172 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 CCDC189A1A4V9 331 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 C9orf172C9J069 976 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 PRICKLE3O43900 615 aaPredicted RBP10.63□□□□□ -0.71
CHD3-216ENST00000573936 WISP3O95389 354 aaPredicted RBP10.63□□□□□ -0.71
CHD3-216ENST00000573936 SLC16A8O95907 504 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 UQCRHP07919 91 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 MSL3P1P0C860 447 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 FGF5P12034 268 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 FOLR1P15328 257 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 ST6GAL1P15907 406 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 CCND1P24385 295 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 PEBP1P30086 187 aaKnown RBP10.63□□□□□ -0.71
CHD3-216ENST00000573936 SERPINB8P50452 374 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 TMPRSS3P57727 454 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 ABATP80404 500 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 CDKL1Q00532 357 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 RHDQ02161 417 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 TLE3Q04726 772 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 FASTKQ14296 549 aaKnown RBP10.63□□□□□ -0.71
CHD3-216ENST00000573936 SLC29A2Q14542 456 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 ZNF460Q14592 562 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 UBAP2Q5T6F2 1119 aaKnown RBP10.63□□□□□ -0.71
CHD3-216ENST00000573936 FRA10AC1Q70Z53 315 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 ADAMTSL2Q86TH1 951 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 TBC1D1Q86TI0 1168 aaPredicted RBP10.63□□□□□ -0.71
CHD3-216ENST00000573936 TAX1BP1Q86VP1 789 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 PPP1R3BQ86XI6 285 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 SPACA3Q8IXA5 215 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 FLVCR1-AS1Q8TAF5 88 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 UHMK1Q8TAS1 419 aaKnown RBP10.63□□□□□ -0.71
CHD3-216ENST00000573936 ZNF480Q8WV37 535 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 ANKRD49Q8WVL7 239 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 DLG3Q92796 817 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 N4BP2L2Q92802 583 aaPredicted RBP10.63□□□□□ -0.71
CHD3-216ENST00000573936 PCBD2Q9H0N5 130 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 PPCSQ9HAB8 311 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 NMRAL1Q9HBL8 299 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 ARL15Q9NXU5 204 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 UTP6Q9NYH9 597 aaKnown RBP10.63□□□□□ -0.71
CHD3-216ENST00000573936 STOX2Q9P2F5 926 aaPredicted RBP10.63□□□□□ -0.71
CHD3-216ENST00000573936 ANKMY1Q9P2S6 941 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 FETUBQ9UGM5 382 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 SERTAD3Q9UJW9 196 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 ACOT9Q9Y305 439 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 OARD1Q9Y530 152 aa10.63□□□□□ -0.71
CHD3-216ENST00000573936 A0A1W2PPV9 198 aa10.62□□□□□ -0.71
CHD3-216ENST00000573936 PMS2P1A4D2B8 440 aa10.62□□□□□ -0.71
CHD3-216ENST00000573936 E7ENX8 843 aa10.62□□□□□ -0.71
CHD3-216ENST00000573936 PHGDHO43175 533 aaKnown RBP10.62□□□□□ -0.71
CHD3-216ENST00000573936 PRAMEF10O60809 474 aa10.62□□□□□ -0.71
CHD3-216ENST00000573936 ANXA5P08758 320 aa10.62□□□□□ -0.71
CHD3-216ENST00000573936 SNRPAP09012 282 aaKnown RBP10.62□□□□□ -0.71
CHD3-216ENST00000573936 LTA4HP09960 611 aaKnown RBP10.62□□□□□ -0.71
CHD3-216ENST00000573936 EBLN1P0CF75 366 aa10.62□□□□□ -0.71
CHD3-216ENST00000573936 HRH2P25021 359 aa10.62□□□□□ -0.71
CHD3-216ENST00000573936 IMPA1P29218 277 aa10.62□□□□□ -0.71
CHD3-216ENST00000573936 TYK2P29597 1187 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms