RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 PCYOX1Q9UHG3 505 aa16.71■□□□□ 0.27
SMG6-214ENST00000573827 FAM169AQ9Y6X4 670 aa16.71■□□□□ 0.27
SMG6-214ENST00000573827 IGKV1-8A0A0C4DH67 115 aa16.7■□□□□ 0.26
SMG6-214ENST00000573827 OR2A25A4D2G3 310 aa16.7■□□□□ 0.26
SMG6-214ENST00000573827 C9J4A7 227 aa16.7■□□□□ 0.26
SMG6-214ENST00000573827 CHRM3P20309 590 aa16.7■□□□□ 0.26
SMG6-214ENST00000573827 GABRB3P28472 473 aa16.7■□□□□ 0.26
SMG6-214ENST00000573827 MPP1Q00013 466 aa16.7■□□□□ 0.26
SMG6-214ENST00000573827 PTK6Q13882 451 aa16.7■□□□□ 0.26
SMG6-214ENST00000573827 SLC9A5Q14940 896 aa16.7■□□□□ 0.26
SMG6-214ENST00000573827 IGFBP7Q16270 282 aa16.7■□□□□ 0.26
SMG6-214ENST00000573827 LONRF1Q17RB8 773 aa16.7■□□□□ 0.26
SMG6-214ENST00000573827 NEK10Q6ZWH5 1172 aa16.7■□□□□ 0.26
SMG6-214ENST00000573827 RNF44Q7L0R7 432 aa16.7■□□□□ 0.26
SMG6-214ENST00000573827 PPP1R32Q7Z5V6 425 aa16.7■□□□□ 0.26
SMG6-214ENST00000573827 IGDCC3Q8IVU1 814 aa16.7■□□□□ 0.26
SMG6-214ENST00000573827 LRRC56Q8IYG6 542 aaPredicted RBP16.7■□□□□ 0.26
SMG6-214ENST00000573827 DTWD1Q8N5C7 304 aa16.7■□□□□ 0.26
SMG6-214ENST00000573827 FBXO15Q8NCQ5 510 aaPredicted RBP16.7■□□□□ 0.26
SMG6-214ENST00000573827 OR9A1PQ8NGU1 263 aa16.7■□□□□ 0.26
SMG6-214ENST00000573827 OR2Y1Q8NGV0 311 aa16.7■□□□□ 0.26
SMG6-214ENST00000573827 GSDMBQ8TAX9 411 aa16.7■□□□□ 0.26
SMG6-214ENST00000573827 CD200R1Q8TD46 325 aa16.7■□□□□ 0.26
SMG6-214ENST00000573827 SKA2Q8WVK7 121 aaPredicted RBP16.7■□□□□ 0.26
SMG6-214ENST00000573827 N4BP2L2Q92802 583 aaPredicted RBP16.7■□□□□ 0.26
SMG6-214ENST00000573827 KCNJ9Q92806 393 aa16.7■□□□□ 0.26
SMG6-214ENST00000573827 MIPEPQ99797 713 aa16.7■□□□□ 0.26
SMG6-214ENST00000573827 WDR83Q9BRX9 315 aaKnown RBP16.7■□□□□ 0.26
SMG6-214ENST00000573827 SLC6A20Q9NP91 592 aa16.7■□□□□ 0.26
SMG6-214ENST00000573827 TSR3Q9UJK0 312 aaKnown RBP16.7■□□□□ 0.26
SMG6-214ENST00000573827 VPS9D1Q9Y2B5 631 aa16.7■□□□□ 0.26
SMG6-214ENST00000573827 MRFAP1Q9Y605 127 aa16.7■□□□□ 0.26
SMG6-214ENST00000573827 SHANK1Q9Y566 2161 aa16.7■□□□□ 0.26
SMG6-214ENST00000573827 HIVEP3Q5T1R4 2406 aa16.69■□□□□ 0.26
SMG6-214ENST00000573827 PCM1Q15154 2024 aa16.69■□□□□ 0.26
SMG6-214ENST00000573827 GFYI3L273 518 aa16.69■□□□□ 0.26
SMG6-214ENST00000573827 DNALI1O14645 258 aaPredicted RBP16.69■□□□□ 0.26
SMG6-214ENST00000573827 PFDN6O15212 129 aa16.69■□□□□ 0.26
SMG6-214ENST00000573827 TP73O15350 636 aa16.69■□□□□ 0.26
SMG6-214ENST00000573827 BANF1O75531 89 aa16.69■□□□□ 0.26
SMG6-214ENST00000573827 HAUS5O94927 633 aa16.69■□□□□ 0.26
SMG6-214ENST00000573827 CCL11P51671 97 aa16.69■□□□□ 0.26
SMG6-214ENST00000573827 MLIPQ5VWP3 458 aa16.69■□□□□ 0.26
SMG6-214ENST00000573827 FRMPD2BQ6IN97 320 aa16.69■□□□□ 0.26
SMG6-214ENST00000573827 FBXO42Q6P3S6 717 aa16.69■□□□□ 0.26
SMG6-214ENST00000573827 TTC23LQ6PF05 361 aa16.69■□□□□ 0.26
SMG6-214ENST00000573827 CREG2Q8IUH2 290 aa16.69■□□□□ 0.26
SMG6-214ENST00000573827 LMNTD2Q8IXW0 634 aa16.69■□□□□ 0.26
SMG6-214ENST00000573827 FDCSPQ8NFU4 85 aa16.69■□□□□ 0.26
SMG6-214ENST00000573827 GRK7Q8WTQ7 553 aa16.69■□□□□ 0.26
SMG6-214ENST00000573827 ASB11Q8WXH4 323 aa16.69■□□□□ 0.26
SMG6-214ENST00000573827 MIB2Q96AX9 1013 aa16.69■□□□□ 0.26
SMG6-214ENST00000573827 FOPNLQ96NB1 174 aa16.69■□□□□ 0.26
SMG6-214ENST00000573827 PKP4Q99569 1192 aa16.69■□□□□ 0.26
SMG6-214ENST00000573827 C17orf62Q9BQA9 187 aa16.69■□□□□ 0.26
SMG6-214ENST00000573827 NDC1Q9BTX1 674 aa16.69■□□□□ 0.26
SMG6-214ENST00000573827 SLC25A23Q9BV35 468 aa16.69■□□□□ 0.26
SMG6-214ENST00000573827 NUDT9Q9BW91 350 aa16.69■□□□□ 0.26
SMG6-214ENST00000573827 SLC7A5P2Q9GIP4 190 aa16.69■□□□□ 0.26
SMG6-214ENST00000573827 C20orf96Q9NUD7 363 aaPredicted RBP16.69■□□□□ 0.26
SMG6-214ENST00000573827 INTS7Q9NVH2 962 aaKnown RBP16.69■□□□□ 0.26
SMG6-214ENST00000573827 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.69■□□□□ 0.26
SMG6-214ENST00000573827 FBXO5Q9UKT4 447 aa16.69■□□□□ 0.26
SMG6-214ENST00000573827 PADI2Q9Y2J8 665 aa16.69■□□□□ 0.26
SMG6-214ENST00000573827 DHRS7Q9Y394 339 aa16.69■□□□□ 0.26
SMG6-214ENST00000573827 LOC105369274A0A096LPK9 316 aa16.68■□□□□ 0.26
SMG6-214ENST00000573827 LOC102723532A0A0G2JNH3 316 aa16.68■□□□□ 0.26
SMG6-214ENST00000573827 A0A1B0GX78 115 aa16.68■□□□□ 0.26
SMG6-214ENST00000573827 CLEC18AA5D8T8 446 aa16.68■□□□□ 0.26
SMG6-214ENST00000573827 DSCR3O14972 297 aa16.68■□□□□ 0.26
SMG6-214ENST00000573827 CD97P48960 835 aa16.68■□□□□ 0.26
SMG6-214ENST00000573827 CUL1Q13616 776 aa16.68■□□□□ 0.26
SMG6-214ENST00000573827 THOC5Q13769 683 aaKnown RBP16.68■□□□□ 0.26
SMG6-214ENST00000573827 SSPNQ14714 243 aa16.68■□□□□ 0.26
SMG6-214ENST00000573827 CRYMQ14894 314 aa16.68■□□□□ 0.26
SMG6-214ENST00000573827 ARHGAP19Q14CB8 494 aa16.68■□□□□ 0.26
SMG6-214ENST00000573827 HSP90AA5PQ58FG0 334 aa16.68■□□□□ 0.26
SMG6-214ENST00000573827 ZC3H12BQ5HYM0 836 aaKnown RBP16.68■□□□□ 0.26
SMG6-214ENST00000573827 CLEC18BQ6UXF7 455 aa16.68■□□□□ 0.26
SMG6-214ENST00000573827 TTLL10Q6ZVT0 673 aa16.68■□□□□ 0.26
SMG6-214ENST00000573827 MED25Q71SY5 747 aa16.68■□□□□ 0.26
SMG6-214ENST00000573827 OR4N4Q8N0Y3 316 aa16.68■□□□□ 0.26
SMG6-214ENST00000573827 TMEM102Q8N9M5 508 aaPredicted RBP16.68■□□□□ 0.26
SMG6-214ENST00000573827 CLEC18CQ8NCF0 446 aa16.68■□□□□ 0.26
SMG6-214ENST00000573827 MAGEC3Q8TD91 643 aa16.68■□□□□ 0.26
SMG6-214ENST00000573827 ZNF480Q8WV37 535 aa16.68■□□□□ 0.26
SMG6-214ENST00000573827 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.68■□□□□ 0.26
SMG6-214ENST00000573827 DLG3Q92796 817 aa16.68■□□□□ 0.26
SMG6-214ENST00000573827 SPSB2Q99619 263 aa16.68■□□□□ 0.26
SMG6-214ENST00000573827 GPR21Q99679 349 aa16.68■□□□□ 0.26
SMG6-214ENST00000573827 SLC26A1Q9H2B4 701 aa16.68■□□□□ 0.26
SMG6-214ENST00000573827 ACSS2Q9NR19 701 aa16.68■□□□□ 0.26
SMG6-214ENST00000573827 CUTCQ9NTM9 273 aa16.68■□□□□ 0.26
SMG6-214ENST00000573827 IFT80Q9P2H3 777 aaPredicted RBP16.68■□□□□ 0.26
SMG6-214ENST00000573827 PTRH2Q9Y3E5 179 aaKnown RBP16.68■□□□□ 0.26
SMG6-214ENST00000573827 MAD1L1Q9Y6D9 718 aa16.68■□□□□ 0.26
SMG6-214ENST00000573827 DOCK10Q96BY6 2186 aa16.67■□□□□ 0.26
SMG6-214ENST00000573827 GOLGA6L10A0A0M3HER8 536 aa16.67■□□□□ 0.26
SMG6-214ENST00000573827 CTAGE9A4FU28 777 aa16.67■□□□□ 0.26
SMG6-214ENST00000573827 E7ENX8 843 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms