RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 SCAMP3O14828 347 aaKnown RBP15.23■□□□□ 0.03
NUP88-207ENST00000573584 RGS10O43665 173 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 CNOT3O75175 753 aaKnown RBP15.23■□□□□ 0.03
NUP88-207ENST00000573584 ANXA5P08758 320 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 PRPS2P11908 318 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 BMP1P13497 986 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 HOXB9P17482 250 aaPredicted RBP15.23■□□□□ 0.03
NUP88-207ENST00000573584 TGM1P22735 817 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 FUT10Q6P4F1 479 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 PRSS55Q6UWB4 352 aaPredicted RBP15.23■□□□□ 0.03
NUP88-207ENST00000573584 ACOT13Q9NPJ3 140 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 MARCH5Q9NX47 278 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 ARL15Q9NXU5 204 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 HCSTQ9UBK5 93 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 FAM20BO75063 409 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 ARHGEF15O94989 841 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 CLDN7O95471 211 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 EPORP19235 508 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 EPHA2P29317 976 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 DNAJA1P31689 397 aaKnown RBP15.22■□□□□ 0.03
NUP88-207ENST00000573584 RPIAP49247 311 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 NKX3-2P78367 333 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 MACC1Q6ZN28 852 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 GALNT10Q86SR1 603 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 ADGRG2Q8IZP9 1017 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 SVOPQ8N4V2 548 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 PHF10Q8WUB8 498 aaKnown RBP15.22■□□□□ 0.03
NUP88-207ENST00000573584 LGALS12Q96DT0 336 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 EGLN2Q96KS0 407 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 SLC32A1Q9H598 525 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 RASSF1Q9NS23 344 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 DNMT3BQ9UBC3 853 aaKnown RBP15.22■□□□□ 0.03
NUP88-207ENST00000573584 SH3BP1Q9Y3L3 701 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 A8MX80 341 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 K7ERQ8 282 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 C1QCP02747 245 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 FABP3P05413 133 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 SDC1P18827 310 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 GRK3P35626 688 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 CHRNA6Q15825 494 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 TTLL9Q3SXZ7 439 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 OR4F3Q6IEY1 312 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 TAS1R1Q7RTX1 841 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 PAGE2Q7Z2X7 111 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 TSPYL5Q86VY4 417 aaPredicted RBP15.22■□□□□ 0.03
NUP88-207ENST00000573584 HORMAD1Q86X24 394 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 FAM9CQ8IZT9 166 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 ELMOD1Q8N336 334 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 TESCQ96BS2 214 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 PSD2Q9BQI7 771 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 RNF38Q9H0F5 515 aa15.22■□□□□ 0.03
NUP88-207ENST00000573584 THG1LQ9NWX6 298 aaKnown RBP15.22■□□□□ 0.03
NUP88-207ENST00000573584 AFF4Q9UHB7 1163 aaKnown RBP15.22■□□□□ 0.03
NUP88-207ENST00000573584 NDRG4Q9ULP0 352 aaKnown RBP15.22■□□□□ 0.03
NUP88-207ENST00000573584 GLYATL1P3A0A0U1RQE8 302 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 AQP9O43315 295 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 KDM1AO60341 852 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 TBL1XO60907 577 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 FPR1P21462 350 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 SLC11A1P49279 550 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 GATMP50440 423 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 MAD2L1BPQ15013 274 aaPredicted RBP15.21■□□□□ 0.03
NUP88-207ENST00000573584 CCSAPQ6IQ19 270 aaPredicted RBP15.21■□□□□ 0.03
NUP88-207ENST00000573584 PLEKHG7Q6ZR37 379 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 VTCN1Q7Z7D3 282 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 SERPINA11Q86U17 422 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 ATG16L2Q8NAA4 619 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 C2orf15Q8WU43 125 aaKnown RBP15.21■□□□□ 0.03
NUP88-207ENST00000573584 RPL3LQ92901 407 aaKnown RBP15.21■□□□□ 0.03
NUP88-207ENST00000573584 UBE2FQ969M7 185 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 HEPHQ9BQS7 1158 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 HERC2P3Q9BVR0 1158 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 CCNB1IP1Q9NPC3 277 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 KIF17Q9P2E2 1029 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 SAMHD1Q9Y3Z3 626 aaKnown RBP15.21■□□□□ 0.03
NUP88-207ENST00000573584 H7C4K7 107 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 ADAM12O43184 909 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 FKBP9O95302 570 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 SEC24AO95486 1093 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 BPIP17213 487 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 HOXA9P31269 272 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 FCGRTP55899 365 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 VLDLRP98155 873 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 MVKQ03426 396 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 LYPLAL1Q5VWZ2 237 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 HOMEZQ8IX15 550 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 SYT17Q9BSW7 474 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 HTATIP2Q9BUP3 242 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 ABCG8Q9H221 673 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 KRT84Q9NSB2 600 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 TMEM161AQ9NX61 479 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 VPS51Q9UID3 782 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 PNMA8BQ9ULN7 279 aaPredicted RBP15.21■□□□□ 0.03
NUP88-207ENST00000573584 GABRQQ9UN88 632 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 SNX6Q9UNH7 406 aa15.21■□□□□ 0.03
NUP88-207ENST00000573584 TRBV5-4A0A0C4DH59 114 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 NBNO60934 754 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 ZNF157P51786 506 aaPredicted RBP15.2■□□□□ 0.02
NUP88-207ENST00000573584 MAPK11Q15759 364 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 INAVAQ3KP66 663 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms