RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 OR9A1PQ8NGU1 263 aa12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 CALML6Q8TD86 181 aa12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 DENND1AQ8TEH3 1009 aa12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 SLCO2A1Q92959 643 aa12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 ZUFSPQ96AP4 578 aa12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 PWWP2AQ96N64 755 aa12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 SLC30A3Q99726 388 aa12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 FAM167BQ9BTA0 163 aa12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 IARS2Q9NSE4 1012 aaKnown RBP12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 G3BP2Q9UN86 482 aaKnown RBP12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 A0A0J9YVX5 310 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 TARM1B6A8C7 271 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 TTI1O43156 1089 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 PRICKLE3O43900 615 aaPredicted RBP12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 PSIP1O75475 530 aaKnown RBP12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 KLF7O75840 302 aaPredicted RBP12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 HAUS5O94927 633 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 FKBP9O95302 570 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 EIF2S1P05198 315 aaKnown RBP12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 CD63P08962 238 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 PGAM1P18669 254 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 IVDP26440 423 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 CMPK1P30085 196 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 CASQ1P31415 396 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 RPA3P35244 121 aaPredicted RBP12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 RRADP55042 308 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 FOXL2P58012 376 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 VSX2P58304 361 aaPredicted RBP12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 DHX9Q08211 1270 aaKnown RBP12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 RAPSNQ13702 412 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 GRM7Q14831 915 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 IGFBP7Q16270 282 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 CYP2A13Q16696 494 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 MSS51Q4VC12 460 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 TCTE1Q5JU00 501 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 HP1BP3Q5SSJ5 553 aaPredicted RBP12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 ZNF549Q6P9A3 640 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 SUSD1Q6UWL2 747 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 SYT10Q6XYQ8 523 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 MED25Q71SY5 747 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 PCGF5Q86SE9 256 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 LMNTD2Q8IXW0 634 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 METTL27Q8N6F8 245 aaPredicted RBP12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 OR2A1Q8NGT9 310 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 GIMAP7Q8NHV1 300 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 HMGCLL1Q8TB92 370 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 KCNJ9Q92806 393 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 KRT12Q99456 494 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 GPR21Q99679 349 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 TRIM31Q9BZY9 425 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 CUTCQ9NTM9 273 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 FBXO5Q9UKT4 447 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 FAM169AQ9Y6X4 670 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 COL6A6A6NMZ7 2263 aa12.18□□□□□ -0.46
NPLOC4-213ENST00000573519 A0A1B0GX78 115 aa12.17□□□□□ -0.46
NPLOC4-213ENST00000573519 A0A1W2PPV9 198 aa12.17□□□□□ -0.46
NPLOC4-213ENST00000573519 PEX12O00623 359 aa12.17□□□□□ -0.46
NPLOC4-213ENST00000573519 NRP2O60462 931 aa12.17□□□□□ -0.46
NPLOC4-213ENST00000573519 CTSVO60911 334 aa12.17□□□□□ -0.46
NPLOC4-213ENST00000573519 VPS26AO75436 327 aa12.17□□□□□ -0.46
NPLOC4-213ENST00000573519 ERVK-10P10266 1014 aa12.17□□□□□ -0.46
NPLOC4-213ENST00000573519 PNLIPRP1P54315 467 aa12.17□□□□□ -0.46
NPLOC4-213ENST00000573519 YBX1P67809 324 aaKnown RBP12.17□□□□□ -0.46
NPLOC4-213ENST00000573519 SSPNQ14714 243 aa12.17□□□□□ -0.46
NPLOC4-213ENST00000573519 CRYMQ14894 314 aa12.17□□□□□ -0.46
NPLOC4-213ENST00000573519 BBS9Q3SYG4 887 aa12.17□□□□□ -0.46
NPLOC4-213ENST00000573519 WASHC2DQ5SRD0 308 aa12.17□□□□□ -0.46
NPLOC4-213ENST00000573519 FRMPD2BQ6IN97 320 aa12.17□□□□□ -0.46
NPLOC4-213ENST00000573519 MRGPREQ86SM8 312 aa12.17□□□□□ -0.46
NPLOC4-213ENST00000573519 IGDCC3Q8IVU1 814 aa12.17□□□□□ -0.46
NPLOC4-213ENST00000573519 CPNE9Q8IYJ1 553 aa12.17□□□□□ -0.46
NPLOC4-213ENST00000573519 TMEM102Q8N9M5 508 aaPredicted RBP12.17□□□□□ -0.46
NPLOC4-213ENST00000573519 PPFIBP2Q8ND30 876 aa12.17□□□□□ -0.46
NPLOC4-213ENST00000573519 OR2Y1Q8NGV0 311 aa12.17□□□□□ -0.46
NPLOC4-213ENST00000573519 GABPB2Q8TAK5 448 aaPredicted RBP12.17□□□□□ -0.46
NPLOC4-213ENST00000573519 SMPDL3AQ92484 453 aa12.17□□□□□ -0.46
NPLOC4-213ENST00000573519 INPP5DQ92835 1189 aa12.17□□□□□ -0.46
NPLOC4-213ENST00000573519 PKP4Q99569 1192 aa12.17□□□□□ -0.46
NPLOC4-213ENST00000573519 NDNQ99608 321 aa12.17□□□□□ -0.46
NPLOC4-213ENST00000573519 DPH7Q9BTV6 452 aa12.17□□□□□ -0.46
NPLOC4-213ENST00000573519 MRPS30Q9NP92 439 aaKnown RBP12.17□□□□□ -0.46
NPLOC4-213ENST00000573519 PPANQ9NQ55 473 aaKnown RBP12.17□□□□□ -0.46
NPLOC4-213ENST00000573519 ZC3H7BQ9UGR2 993 aaKnown RBP12.17□□□□□ -0.46
NPLOC4-213ENST00000573519 TAC3Q9UHF0 121 aa12.17□□□□□ -0.46
NPLOC4-213ENST00000573519 PCDHGA9Q9Y5G4 932 aaKnown RBP12.17□□□□□ -0.46
NPLOC4-213ENST00000573519 COMMD10Q9Y6G5 202 aa12.17□□□□□ -0.46
NPLOC4-213ENST00000573519 HELZ2Q9BYK8 2649 aaKnown RBP12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 ZNF839A8K0R7 811 aa12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 CCDC188H7C350 402 aa12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 MYO1CO00159 1063 aa12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 DSCR3O14972 297 aa12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 ZBTB14O43829 449 aa12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 CNOT3O75175 753 aaKnown RBP12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 MPC1LP0DKB6 136 aa12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 PIM1P11309 404 aaPredicted RBP12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 ITGA8P53708 1063 aa12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 MLLT10P55197 1068 aa12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 ETF1P62495 437 aaKnown RBP12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 NAA25Q14CX7 972 aa12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 FAM214AQ32MH5 1076 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms