RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 METRNLQ641Q3 311 aa11.49□□□□□ -0.57
NDE1-206ENST00000572967 PAQR3Q6TCH7 311 aa11.49□□□□□ -0.57
NDE1-206ENST00000572967 UNC5DQ6UXZ4 953 aa11.49□□□□□ -0.57
NDE1-206ENST00000572967 CEACAM20Q6UY09 585 aa11.49□□□□□ -0.57
NDE1-206ENST00000572967 FAM92BQ6ZTR7 304 aa11.49□□□□□ -0.57
NDE1-206ENST00000572967 FRA10AC1Q70Z53 315 aa11.49□□□□□ -0.57
NDE1-206ENST00000572967 CPNE9Q8IYJ1 553 aa11.49□□□□□ -0.57
NDE1-206ENST00000572967 NLGN4XQ8N0W4 816 aa11.49□□□□□ -0.57
NDE1-206ENST00000572967 EXD3Q8N9H8 876 aa11.49□□□□□ -0.57
NDE1-206ENST00000572967 NLGN4YQ8NFZ3 816 aaPredicted RBP11.49□□□□□ -0.57
NDE1-206ENST00000572967 LKAAEAR1Q8TD35 194 aa11.49□□□□□ -0.57
NDE1-206ENST00000572967 MZB1Q8WU39 189 aa11.49□□□□□ -0.57
NDE1-206ENST00000572967 FAM136AQ96C01 138 aa11.49□□□□□ -0.57
NDE1-206ENST00000572967 TEFMQ96QE5 360 aaKnown RBP11.49□□□□□ -0.57
NDE1-206ENST00000572967 ASPSCR1Q9BZE9 553 aa11.49□□□□□ -0.57
NDE1-206ENST00000572967 UCK1Q9HA47 277 aa11.49□□□□□ -0.57
NDE1-206ENST00000572967 IMP3Q9NV31 184 aaKnown RBP11.49□□□□□ -0.57
NDE1-206ENST00000572967 GRID1Q9ULK0 1009 aa11.49□□□□□ -0.57
NDE1-206ENST00000572967 TMCO1Q9UM00 188 aa11.49□□□□□ -0.57
NDE1-206ENST00000572967 MGAQ8IWI9 3026 aa11.48□□□□□ -0.57
NDE1-206ENST00000572967 SLC28A2O43868 658 aa11.48□□□□□ -0.57
NDE1-206ENST00000572967 KIF1CO43896 1103 aaKnown RBP11.48□□□□□ -0.57
NDE1-206ENST00000572967 SASH3O75995 380 aa11.48□□□□□ -0.57
NDE1-206ENST00000572967 S100BP04271 92 aaPredicted RBP11.48□□□□□ -0.57
NDE1-206ENST00000572967 ITGB2P05107 769 aa11.48□□□□□ -0.57
NDE1-206ENST00000572967 F7P08709 466 aaPredicted RBP11.48□□□□□ -0.57
NDE1-206ENST00000572967 HIST1H2AGP0C0S8 130 aaPredicted RBP11.48□□□□□ -0.57
NDE1-206ENST00000572967 HIST1H2ADP20671 130 aa11.48□□□□□ -0.57
NDE1-206ENST00000572967 SLC18A2Q05940 514 aa11.48□□□□□ -0.57
NDE1-206ENST00000572967 CSHL1Q14406 222 aa11.48□□□□□ -0.57
NDE1-206ENST00000572967 KRT33BQ14525 404 aa11.48□□□□□ -0.57
NDE1-206ENST00000572967 GBX1Q14549 363 aa11.48□□□□□ -0.57
NDE1-206ENST00000572967 ACAP2Q15057 778 aa11.48□□□□□ -0.57
NDE1-206ENST00000572967 TBR1Q16650 682 aa11.48□□□□□ -0.57
NDE1-206ENST00000572967 CCDC153Q494R4 210 aa11.48□□□□□ -0.57
NDE1-206ENST00000572967 ABRAXAS1Q6UWZ7 409 aa11.48□□□□□ -0.57
NDE1-206ENST00000572967 CEP97Q8IW35 865 aa11.48□□□□□ -0.57
NDE1-206ENST00000572967 RBM12BQ8IXT5 1001 aaKnown RBP11.48□□□□□ -0.57
NDE1-206ENST00000572967 ARFGAP2Q8N6H7 521 aa11.48□□□□□ -0.57
NDE1-206ENST00000572967 GIMAP7Q8NHV1 300 aa11.48□□□□□ -0.57
NDE1-206ENST00000572967 STAG3L4Q8TBR4 150 aa11.48□□□□□ -0.57
NDE1-206ENST00000572967 SCYL1Q96KG9 808 aa11.48□□□□□ -0.57
NDE1-206ENST00000572967 HIST1H2AHQ96KK5 128 aa11.48□□□□□ -0.57
NDE1-206ENST00000572967 UBXN10Q96LJ8 280 aa11.48□□□□□ -0.57
NDE1-206ENST00000572967 HIST1H2AJQ99878 128 aa11.48□□□□□ -0.57
NDE1-206ENST00000572967 H2AFJQ9BTM1 129 aa11.48□□□□□ -0.57
NDE1-206ENST00000572967 RAB11FIP5Q9BXF6 653 aa11.48□□□□□ -0.57
NDE1-206ENST00000572967 SLC12A9Q9BXP2 914 aa11.48□□□□□ -0.57
NDE1-206ENST00000572967 ULBP3Q9BZM4 244 aa11.48□□□□□ -0.57
NDE1-206ENST00000572967 TRIM4Q9C037 500 aa11.48□□□□□ -0.57
NDE1-206ENST00000572967 MRPL46Q9H2W6 279 aaKnown RBP11.48□□□□□ -0.57
NDE1-206ENST00000572967 ZNF768Q9H5H4 540 aaKnown RBP11.48□□□□□ -0.57
NDE1-206ENST00000572967 TFB2MQ9H5Q4 396 aaKnown RBP11.48□□□□□ -0.57
NDE1-206ENST00000572967 GPN2Q9H9Y4 310 aaPredicted RBP11.48□□□□□ -0.57
NDE1-206ENST00000572967 SLC40A1Q9NP59 571 aa11.48□□□□□ -0.57
NDE1-206ENST00000572967 NKIRAS1Q9NYS0 192 aa11.48□□□□□ -0.57
NDE1-206ENST00000572967 PILRAQ9UKJ1 303 aa11.48□□□□□ -0.57
NDE1-206ENST00000572967 NOVA2Q9UNW9 492 aaKnown RBP11.48□□□□□ -0.57
NDE1-206ENST00000572967 MED16Q9Y2X0 877 aa11.48□□□□□ -0.57
NDE1-206ENST00000572967 COLEC10Q9Y6Z7 277 aa11.48□□□□□ -0.57
NDE1-206ENST00000572967 COL6A6A6NMZ7 2263 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 LOC101059948A0A1B0GTJ6 334 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 ZNF839A8K0R7 811 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 ZNF891A8MT65 544 aaPredicted RBP11.47□□□□□ -0.57
NDE1-206ENST00000572967 AGPSO00116 658 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 BTN3A1O00481 513 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 POLR1CO15160 346 aaPredicted RBP11.47□□□□□ -0.57
NDE1-206ENST00000572967 TM9SF1O15321 606 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 ZBTB14O43829 449 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 ZWINTO95229 277 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 DLGAP3O95886 979 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 ZNF28P17035 718 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 TAC1P20366 129 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 CRHR1P34998 444 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 PREPP48147 710 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 CSRP3P50461 194 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 AP1S2P56377 157 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 MAGOHP61326 146 aaKnown RBP11.47□□□□□ -0.57
NDE1-206ENST00000572967 ASPHQ12797 758 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 CDC20Q12834 499 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 ZNF460Q14592 562 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 ZNF658BQ4V348 819 aaPredicted RBP11.47□□□□□ -0.57
NDE1-206ENST00000572967 ACSBG2Q5FVE4 666 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 TNFAIP8L3Q5GJ75 292 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 CACHD1Q5VU97 1274 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 TIPARPQ7Z3E1 657 aaKnown RBP11.47□□□□□ -0.57
NDE1-206ENST00000572967 PRSS42Q7Z5A4 293 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 DCUN1D3Q8IWE4 304 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 CYP4X1Q8N118 509 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 C4orf33Q8N1A6 199 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 ACVR1CQ8NER5 493 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 RHEBL1Q8TAI7 183 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 RDH11Q8TC12 318 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 MCOLN3Q8TDD5 553 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 ATL1Q8WXF7 558 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 STARD8Q92502 1023 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 KIAA1143Q96AT1 154 aaPredicted RBP11.47□□□□□ -0.57
NDE1-206ENST00000572967 TLCD1Q96CP7 247 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 CCDC126Q96EE4 140 aa11.47□□□□□ -0.57
NDE1-206ENST00000572967 RMDN2Q96LZ7 410 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms