RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 CEP19Q96LK0 163 aa16.39■□□□□ 0.21
LITAF-209ENST00000571688 TRIM62Q9BVG3 475 aa16.39■□□□□ 0.21
LITAF-209ENST00000571688 GABARAPL3Q9BY60 117 aa16.39■□□□□ 0.21
LITAF-209ENST00000571688 CFL2Q9Y281 166 aa16.39■□□□□ 0.21
LITAF-209ENST00000571688 SAMHD1Q9Y3Z3 626 aaKnown RBP16.39■□□□□ 0.21
LITAF-209ENST00000571688 hCG_2039718K7EN88 272 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 GJB3O75712 270 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 MOCS2O96007 188 aaPredicted RBP16.38■□□□□ 0.21
LITAF-209ENST00000571688 PKLRP30613 574 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 TNFSF8P32971 234 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 VLDLRP98155 873 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 GALNT3Q14435 633 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 KIAA1841Q6NSI8 718 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 TMEM86AQ8N2M4 240 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 PSMG2Q969U7 264 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 TRNT1Q96Q11 434 aaKnown RBP16.38■□□□□ 0.21
LITAF-209ENST00000571688 GON7Q9BXV9 100 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 QTRT2Q9H974 415 aaKnown RBP16.38■□□□□ 0.21
LITAF-209ENST00000571688 RANGRFQ9HD47 186 aaPredicted RBP16.38■□□□□ 0.21
LITAF-209ENST00000571688 SERHLQ9NQF3 203 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 STMN3Q9NZ72 180 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 NUDT4Q9NZJ9 180 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 CACNG4Q9UBN1 327 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 PRELID1Q9Y255 219 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 MAN2B2Q9Y2E5 1009 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 PCNTO95613 3336 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 A0A0X1KG70 313 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 PTGESO14684 152 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 KIAA0513O60268 411 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 VPS26AO75436 327 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 NDUFS3O75489 264 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 PTHP01270 115 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 VIPP01282 170 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 HTR2BP41595 481 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 PCBP1Q15365 356 aaKnown RBP eCLIP16.38■□□□□ 0.21
LITAF-209ENST00000571688 PTPRNQ16849 979 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 C18orf21Q32NC0 220 aaPredicted RBP16.38■□□□□ 0.21
LITAF-209ENST00000571688 GPAT3Q53EU6 434 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 CHCHD4Q8N4Q1 142 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 MYLPFQ96A32 169 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 COL21A1Q96P44 957 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 FYTTD1Q96QD9 318 aaKnown RBP16.38■□□□□ 0.21
LITAF-209ENST00000571688 KCNS3Q9BQ31 491 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 KCNH6Q9H252 994 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 ZNF408Q9H9D4 720 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 ASAH2Q9NR71 780 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 SPASTQ9UBP0 616 aa16.38■□□□□ 0.21
LITAF-209ENST00000571688 TRMT6Q9UJA5 497 aaKnown RBP16.38■□□□□ 0.21
LITAF-209ENST00000571688 RGS14O43566 566 aa16.37■□□□□ 0.21
LITAF-209ENST00000571688 RPS12P25398 132 aaKnown RBP16.37■□□□□ 0.21
LITAF-209ENST00000571688 IL2P60568 153 aa16.37■□□□□ 0.21
LITAF-209ENST00000571688 GTF2H2Q13888 395 aa16.37■□□□□ 0.21
LITAF-209ENST00000571688 ARMC4Q5T2S8 1044 aa16.37■□□□□ 0.21
LITAF-209ENST00000571688 GTF2H2CQ6P1K8 395 aa16.37■□□□□ 0.21
LITAF-209ENST00000571688 SUSD1Q6UWL2 747 aa16.37■□□□□ 0.21
LITAF-209ENST00000571688 ZNF551Q7Z340 670 aaPredicted RBP16.37■□□□□ 0.21
LITAF-209ENST00000571688 CD200R1Q8TD46 325 aa16.37■□□□□ 0.21
LITAF-209ENST00000571688 C3orf14Q9HBI5 128 aa16.37■□□□□ 0.21
LITAF-209ENST00000571688 NLE1Q9NVX2 485 aaPredicted RBP16.37■□□□□ 0.21
LITAF-209ENST00000571688 PCDHB5Q9Y5E4 795 aa16.37■□□□□ 0.21
LITAF-209ENST00000571688 SLC12A8A0AV02 714 aa16.37■□□□□ 0.21
LITAF-209ENST00000571688 NIPSNAP2O75323 286 aa16.37■□□□□ 0.21
LITAF-209ENST00000571688 UBL4AP11441 157 aa16.37■□□□□ 0.21
LITAF-209ENST00000571688 PTPN6P29350 595 aa16.37■□□□□ 0.21
LITAF-209ENST00000571688 CRISP3P54108 245 aa16.37■□□□□ 0.21
LITAF-209ENST00000571688 MLLT6P55198 1093 aaPredicted RBP16.37■□□□□ 0.21
LITAF-209ENST00000571688 CACHD1Q5VU97 1274 aa16.37■□□□□ 0.21
LITAF-209ENST00000571688 TRAF7Q6Q0C0 670 aa16.37■□□□□ 0.21
LITAF-209ENST00000571688 ZSWIM9Q86XI8 627 aa16.37■□□□□ 0.21
LITAF-209ENST00000571688 CCDC28AQ8IWP9 274 aa16.37■□□□□ 0.21
LITAF-209ENST00000571688 TMEM132CQ8N3T6 1108 aa16.37■□□□□ 0.21
LITAF-209ENST00000571688 BHMTQ93088 406 aa16.37■□□□□ 0.21
LITAF-209ENST00000571688 C1orf74Q96LT6 269 aa16.37■□□□□ 0.21
LITAF-209ENST00000571688 MCCC1Q96RQ3 725 aaPredicted RBP16.37■□□□□ 0.21
LITAF-209ENST00000571688 SMURF1Q9HCE7 757 aa16.37■□□□□ 0.21
LITAF-209ENST00000571688 AMBNQ9NP70 447 aa16.37■□□□□ 0.21
LITAF-209ENST00000571688 THUMPD1Q9NXG2 353 aaKnown RBP16.37■□□□□ 0.21
LITAF-209ENST00000571688 ASIC5Q9NY37 505 aa16.37■□□□□ 0.21
LITAF-209ENST00000571688 V9GYH0 126 aa16.37■□□□□ 0.21
LITAF-209ENST00000571688 OTCP00480 354 aa16.36■□□□□ 0.21
LITAF-209ENST00000571688 MYCP01106 439 aaPredicted RBP16.36■□□□□ 0.21
LITAF-209ENST00000571688 M6PRP20645 277 aa16.36■□□□□ 0.21
LITAF-209ENST00000571688 OR3A3P47888 321 aa16.36■□□□□ 0.21
LITAF-209ENST00000571688 ZNF140P52738 457 aaPredicted RBP16.36■□□□□ 0.21
LITAF-209ENST00000571688 OLR1P78380 273 aa16.36■□□□□ 0.21
LITAF-209ENST00000571688 PIK3R6Q5UE93 754 aa16.36■□□□□ 0.21
LITAF-209ENST00000571688 TAPT1Q6NXT6 567 aa16.36■□□□□ 0.21
LITAF-209ENST00000571688 C19orf48Q6RUI8 117 aa16.36■□□□□ 0.21
LITAF-209ENST00000571688 AFTPHQ6ULP2 937 aa16.36■□□□□ 0.21
LITAF-209ENST00000571688 FAM109AQ8N4B1 249 aa16.36■□□□□ 0.21
LITAF-209ENST00000571688 CARNMT1Q8N4J0 409 aa16.36■□□□□ 0.21
LITAF-209ENST00000571688 SEMA3CQ99985 751 aa16.36■□□□□ 0.21
LITAF-209ENST00000571688 TTPALQ9BTX7 342 aa16.36■□□□□ 0.21
LITAF-209ENST00000571688 MKRN2Q9H000 416 aaKnown RBP16.36■□□□□ 0.21
LITAF-209ENST00000571688 ABCC13Q9NSE7 274 aa16.36■□□□□ 0.21
LITAF-209ENST00000571688 MUTYHQ9UIF7 546 aa16.36■□□□□ 0.21
LITAF-209ENST00000571688 IPPQ9Y573 584 aa16.36■□□□□ 0.21
LITAF-209ENST00000571688 SNX8Q9Y5X2 465 aa16.36■□□□□ 0.21
LITAF-209ENST00000571688 AOC2O75106 756 aa16.36■□□□□ 0.21
LITAF-209ENST00000571688 STSP08842 583 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms