RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 TRPS1Q9UHF7 1281 aa17■□□□□ 0.31
SCARF1-205ENST00000571272 SAMHD1Q9Y3Z3 626 aaKnown RBP17■□□□□ 0.31
SCARF1-205ENST00000571272 PLXNA4Q9HCM2 1894 aa17■□□□□ 0.31
SCARF1-205ENST00000571272 A8MU76 341 aa17■□□□□ 0.31
SCARF1-205ENST00000571272 TMEM189-UBE2V1I3L0A0 370 aa17■□□□□ 0.31
SCARF1-205ENST00000571272 GAPDHSO14556 408 aaPredicted RBP17■□□□□ 0.31
SCARF1-205ENST00000571272 WNT9AO14904 365 aa17■□□□□ 0.31
SCARF1-205ENST00000571272 WDR47O94967 919 aa17■□□□□ 0.31
SCARF1-205ENST00000571272 CCNDBP1O95273 360 aa17■□□□□ 0.31
SCARF1-205ENST00000571272 CLDN9O95484 217 aa17■□□□□ 0.31
SCARF1-205ENST00000571272 TPTEP56180 551 aa17■□□□□ 0.31
SCARF1-205ENST00000571272 KEAP1Q14145 624 aa17■□□□□ 0.31
SCARF1-205ENST00000571272 MAD2L1BPQ15013 274 aaPredicted RBP17■□□□□ 0.31
SCARF1-205ENST00000571272 KCNA10Q16322 511 aa17■□□□□ 0.31
SCARF1-205ENST00000571272 MCFD2Q8NI22 146 aa17■□□□□ 0.31
SCARF1-205ENST00000571272 BCL7BQ9BQE9 202 aa17■□□□□ 0.31
SCARF1-205ENST00000571272 KRT84Q9NSB2 600 aa17■□□□□ 0.31
SCARF1-205ENST00000571272 VPS51Q9UID3 782 aa17■□□□□ 0.31
SCARF1-205ENST00000571272 EFCAB9A8MZ26 197 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 K7ERQ8 282 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 KRT6AP02538 564 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 KRT6BP04259 564 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 GKP32189 559 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 KRT6CP48668 564 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 FAM189BP81408 668 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 CXorf57Q6NSI4 855 aaKnown RBP16.99■□□□□ 0.31
SCARF1-205ENST00000571272 RNF175Q8N4F7 328 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 MINDY2Q8NBR6 621 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 DPH2Q9BQC3 489 aaPredicted RBP16.99■□□□□ 0.31
SCARF1-205ENST00000571272 ZBTB20Q9HC78 741 aaPredicted RBP16.99■□□□□ 0.31
SCARF1-205ENST00000571272 TM9SF3Q9HD45 589 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 AMBNQ9NP70 447 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 LHX3Q9UBR4 397 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 A0A1B0GVM2 712 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 CELF2O95319 508 aaKnown RBP16.99■□□□□ 0.31
SCARF1-205ENST00000571272 IL1RNP18510 177 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 EFNA1P20827 205 aaPredicted RBP16.99■□□□□ 0.31
SCARF1-205ENST00000571272 CD40LGP29965 261 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 SEPHS1P49903 392 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 CREMQ03060 361 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 NFATC2Q13469 925 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 SMU1Q2TAY7 513 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 SLC24A5Q71RS6 500 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 LINC01599Q8WXQ3 324 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 APOLD1Q96LR9 279 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 IL26Q9NPH9 171 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 SIRT5Q9NXA8 310 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 NDRG4Q9ULP0 352 aaKnown RBP16.99■□□□□ 0.31
SCARF1-205ENST00000571272 ZNF232Q9UNY5 417 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 MAN2B2Q9Y2E5 1009 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 OR6C75A6NL08 312 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 EVPLLA8MZ36 301 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 INPPL1O15357 1258 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 COCHO43405 550 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 CLDN7O95471 211 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 SDC1P18827 310 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 EPORP19235 508 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 MAGP20916 626 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 DNAJA1P31689 397 aaKnown RBP16.99■□□□□ 0.31
SCARF1-205ENST00000571272 CLK1P49759 484 aaKnown RBP16.99■□□□□ 0.31
SCARF1-205ENST00000571272 CXCR4P61073 352 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 GPR17Q13304 367 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 MRPL58Q14197 206 aaKnown RBP16.99■□□□□ 0.31
SCARF1-205ENST00000571272 KCNJ8Q15842 424 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 RTP2Q5QGT7 225 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 GPRC6AQ5T6X5 926 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 Q6ZPB1 254 aaPredicted RBP16.99■□□□□ 0.31
SCARF1-205ENST00000571272 LINC00299Q6ZSB3 139 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 SVOPQ8N4V2 548 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 RHOXF1Q8NHV9 184 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 APIPQ96GX9 242 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 SPATA17Q96L03 361 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 EBPLQ9BY08 206 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.99■□□□□ 0.31
SCARF1-205ENST00000571272 ELOVL6Q9H5J4 265 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 ZFYVE1Q9HBF4 777 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 THG1LQ9NWX6 298 aaKnown RBP16.99■□□□□ 0.31
SCARF1-205ENST00000571272 ASIC5Q9NY37 505 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 CRLS1Q9UJA2 301 aa16.99■□□□□ 0.31
SCARF1-205ENST00000571272 KRT87PA6NCN2 255 aa16.98■□□□□ 0.31
SCARF1-205ENST00000571272 PCDHGA12O60330 932 aa16.98■□□□□ 0.31
SCARF1-205ENST00000571272 FABP3P05413 133 aa16.98■□□□□ 0.31
SCARF1-205ENST00000571272 RPP38P78345 283 aaKnown RBP16.98■□□□□ 0.31
SCARF1-205ENST00000571272 GALNT13Q8IUC8 556 aa16.98■□□□□ 0.31
SCARF1-205ENST00000571272 CEP295NLQ96MC4 621 aa16.98■□□□□ 0.31
SCARF1-205ENST00000571272 GABARAPL1Q9H0R8 117 aa16.98■□□□□ 0.31
SCARF1-205ENST00000571272 DCSTAMPQ9H295 470 aa16.98■□□□□ 0.31
SCARF1-205ENST00000571272 ARL15Q9NXU5 204 aa16.98■□□□□ 0.31
SCARF1-205ENST00000571272 FZD6O60353 706 aa16.98■□□□□ 0.31
SCARF1-205ENST00000571272 WBP4O75554 376 aaKnown RBP16.98■□□□□ 0.31
SCARF1-205ENST00000571272 STC2O76061 302 aa16.98■□□□□ 0.31
SCARF1-205ENST00000571272 PABPC1P11940 636 aaKnown RBP16.98■□□□□ 0.31
SCARF1-205ENST00000571272 FPR1P21462 350 aa16.98■□□□□ 0.31
SCARF1-205ENST00000571272 GRK3P35626 688 aa16.98■□□□□ 0.31
SCARF1-205ENST00000571272 TGFBR2P37173 567 aa16.98■□□□□ 0.31
SCARF1-205ENST00000571272 ALDH7A1P49419 539 aaKnown RBP16.98■□□□□ 0.31
SCARF1-205ENST00000571272 GATMP50440 423 aa16.98■□□□□ 0.31
SCARF1-205ENST00000571272 COLEC12Q5KU26 742 aa16.98■□□□□ 0.31
SCARF1-205ENST00000571272 ARMC12Q5T9G4 340 aa16.98■□□□□ 0.31
SCARF1-205ENST00000571272 KIAA1614Q5VZ46 1190 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms