RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 CXorf51AA0A1B0GTR3 108 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 A0A1W2PPC4 97 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 POC1B-GALNT4F8VUJ3 575 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 H7C1Q1 480 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 YKT6O15498 198 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 RRP8O43159 456 aaKnown RBP4.8□□□□□ -1.64
KARSP3-201ENST00000571212 TLX3O43711 291 aaPredicted RBP4.8□□□□□ -1.64
KARSP3-201ENST00000571212 PROSCO94903 275 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 LDOC1O95751 146 aaPredicted RBP4.8□□□□□ -1.64
KARSP3-201ENST00000571212 HRGP04196 525 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 PRB1P04280 392 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 IGHV4-34P06331 123 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 ATP5BP06576 529 aaKnown RBP4.8□□□□□ -1.64
KARSP3-201ENST00000571212 DLDP09622 509 aaKnown RBP4.8□□□□□ -1.64
KARSP3-201ENST00000571212 SLC2A3P11169 496 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 ZNF24P17028 368 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 ABCB4P21439 1286 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 IL1R2P27930 398 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 HOXD9P28356 352 aaPredicted RBP4.8□□□□□ -1.64
KARSP3-201ENST00000571212 HLA-FP30511 346 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 HNRNPH1P31943 449 aaKnown RBP4.8□□□□□ -1.64
KARSP3-201ENST00000571212 CCR1P32246 355 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 HCAR3P49019 387 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 PEX5P50542 639 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 C21orf59P57076 290 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 SPA17Q15506 151 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 DPYSL2Q16555 572 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 C15orf59Q2T9L4 293 aaPredicted RBP4.8□□□□□ -1.64
KARSP3-201ENST00000571212 RAB6CQ53S08 254 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 FAM133BQ5BKY9 247 aaKnown RBP4.8□□□□□ -1.64
KARSP3-201ENST00000571212 KCNT1Q5JUK3 1230 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 WLSQ5T9L3 541 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 RNF220Q5VTB9 566 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 NUGGCQ68CJ6 796 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 ZNF776Q68DI1 518 aaPredicted RBP4.8□□□□□ -1.64
KARSP3-201ENST00000571212 NADSYN1Q6IA69 706 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 C11orf63Q6NUN7 778 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 DNAJC24Q6P3W2 148 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 C16orf87Q6PH81 154 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 DARS2Q6PI48 645 aaKnown RBP4.8□□□□□ -1.64
KARSP3-201ENST00000571212 CHST9Q7L1S5 443 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 RSRC2Q7L4I2 434 aaKnown RBP4.8□□□□□ -1.64
KARSP3-201ENST00000571212 KIAA1328Q86T90 577 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 ADIPOR2Q86V24 386 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 ANKRD13BQ86YJ7 626 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 UNC45BQ8IWX7 931 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 CCAR2Q8N163 923 aaKnown RBP4.8□□□□□ -1.64
KARSP3-201ENST00000571212 GALNT4Q8N4A0 578 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 ZNF564Q8TBZ8 553 aaPredicted RBP4.8□□□□□ -1.64
KARSP3-201ENST00000571212 MIPOL1Q8TD10 442 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 TEKT4Q8WW24 435 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 CTNNBL1Q8WYA6 563 aaPredicted RBP4.8□□□□□ -1.64
KARSP3-201ENST00000571212 FAM149B1Q96BN6 582 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 ZNF653Q96CK0 615 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 FAF2Q96CS3 445 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 TMA16Q96EY4 203 aaKnown RBP4.8□□□□□ -1.64
KARSP3-201ENST00000571212 CNDP2Q96KP4 475 aaKnown RBP4.8□□□□□ -1.64
KARSP3-201ENST00000571212 CFAP57Q96MR6 1250 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 MCEEQ96PE7 176 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 SNX18Q96RF0 628 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 PEBP4Q96S96 227 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 SELENOOQ9BVL4 669 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 NUP85Q9BW27 656 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 RAB6CQ9H0N0 254 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 ARFGAP3Q9NP61 516 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 PRSS16Q9NQE7 514 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 ASIC5Q9NY37 505 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 FZD10Q9ULW2 581 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 TFR2Q9UP52 801 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 NCKAP1Q9Y2A7 1128 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 PPP2R2CQ9Y2T4 447 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 PCDHGB6Q9Y5F9 930 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 ALG6Q9Y672 507 aa4.8□□□□□ -1.64
KARSP3-201ENST00000571212 SMG1Q96Q15 3661 aaKnown RBP4.8□□□□□ -1.64
KARSP3-201ENST00000571212 NAV2Q8IVL1 2488 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 C3orf70A6NLC5 250 aaPredicted RBP4.79□□□□□ -1.64
KARSP3-201ENST00000571212 C10orf142B7Z368 130 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 M0QYT0 321 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 MAP2K7O14733 419 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 CAPN9O14815 690 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 PHGDHO43175 533 aaKnown RBP4.79□□□□□ -1.64
KARSP3-201ENST00000571212 KALRNO60229 2985 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 ACSL4O60488 711 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 ERLIN1O75477 346 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 GRAP2O75791 330 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 TUBBP07437 444 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 CCDC175P0C221 793 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 PLA2G2AP14555 144 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 TCF4P15884 667 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 POLR2EP19388 210 aaKnown RBP4.79□□□□□ -1.64
KARSP3-201ENST00000571212 MIPP30301 263 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 SDC4P31431 198 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 HTR7P34969 479 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 LMAN1P49257 510 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 HARS2P49590 506 aaKnown RBP4.79□□□□□ -1.64
KARSP3-201ENST00000571212 ACADVLP49748 655 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 WNT3P56703 355 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 IL9RQ01113 521 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 SEMG2Q02383 582 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 KIF5AQ12840 1032 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms