RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 EXOC1LA0A1B0GW35 172 aa12.88□□□□□ -0.35
CCDC40-205ENST00000571028 PHGDHO43175 533 aaKnown RBP12.88□□□□□ -0.35
CCDC40-205ENST00000571028 KATNA1O75449 491 aa12.88□□□□□ -0.35
CCDC40-205ENST00000571028 SYF2O95926 243 aaKnown RBP12.88□□□□□ -0.35
CCDC40-205ENST00000571028 INHBAP08476 426 aa12.88□□□□□ -0.35
CCDC40-205ENST00000571028 FDXRP22570 491 aa12.88□□□□□ -0.35
CCDC40-205ENST00000571028 COL8A1P27658 744 aa12.88□□□□□ -0.35
CCDC40-205ENST00000571028 NDUFS1P28331 727 aa12.88□□□□□ -0.35
CCDC40-205ENST00000571028 DLSTP36957 453 aa12.88□□□□□ -0.35
CCDC40-205ENST00000571028 RGS4P49798 205 aa12.88□□□□□ -0.35
CCDC40-205ENST00000571028 NAB1Q13506 487 aa12.88□□□□□ -0.35
CCDC40-205ENST00000571028 MROH9Q5TGP6 573 aa12.88□□□□□ -0.35
CCDC40-205ENST00000571028 WDR93Q6P2C0 686 aa12.88□□□□□ -0.35
CCDC40-205ENST00000571028 CEP97Q8IW35 865 aa12.88□□□□□ -0.35
CCDC40-205ENST00000571028 C2orf73Q8N5S3 287 aaPredicted RBP12.88□□□□□ -0.35
CCDC40-205ENST00000571028 LMNTD1Q8N9Z9 388 aa12.88□□□□□ -0.35
CCDC40-205ENST00000571028 LCN9Q8WX39 176 aa12.88□□□□□ -0.35
CCDC40-205ENST00000571028 TXLNGYQ9BZA5 131 aa12.88□□□□□ -0.35
CCDC40-205ENST00000571028 SLC29A3Q9BZD2 475 aa12.88□□□□□ -0.35
CCDC40-205ENST00000571028 ULBP3Q9BZM4 244 aa12.88□□□□□ -0.35
CCDC40-205ENST00000571028 UNKQ9C0B0 810 aaKnown RBP12.88□□□□□ -0.35
CCDC40-205ENST00000571028 MVB12BQ9H7P6 319 aa12.88□□□□□ -0.35
CCDC40-205ENST00000571028 FBXO8Q9NRD0 319 aa12.88□□□□□ -0.35
CCDC40-205ENST00000571028 TLK1Q9UKI8 766 aa12.88□□□□□ -0.35
CCDC40-205ENST00000571028 CDC14CA4D256 554 aa12.87□□□□□ -0.35
CCDC40-205ENST00000571028 KRT87PA6NCN2 255 aa12.87□□□□□ -0.35
CCDC40-205ENST00000571028 OR6C74A6NCV1 312 aa12.87□□□□□ -0.35
CCDC40-205ENST00000571028 SMIM23A6NLE4 172 aa12.87□□□□□ -0.35
CCDC40-205ENST00000571028 UBXN7O94888 489 aa12.87□□□□□ -0.35
CCDC40-205ENST00000571028 RNF224P0DH78 156 aa12.87□□□□□ -0.35
CCDC40-205ENST00000571028 SKIV2L2P42285 1042 aaKnown RBP12.87□□□□□ -0.35
CCDC40-205ENST00000571028 IL2P60568 153 aa12.87□□□□□ -0.35
CCDC40-205ENST00000571028 MAP7Q14244 749 aa12.87□□□□□ -0.35
CCDC40-205ENST00000571028 CCSMST1Q4G0I0 132 aa12.87□□□□□ -0.35
CCDC40-205ENST00000571028 ARMC6Q6NXE6 501 aa12.87□□□□□ -0.35
CCDC40-205ENST00000571028 TTC23LQ6PF05 361 aa12.87□□□□□ -0.35
CCDC40-205ENST00000571028 TMEM207Q6UWW9 146 aa12.87□□□□□ -0.35
CCDC40-205ENST00000571028 RAPH1Q70E73 1250 aa12.87□□□□□ -0.35
CCDC40-205ENST00000571028 CMC1Q7Z7K0 106 aa12.87□□□□□ -0.35
CCDC40-205ENST00000571028 RBM12BQ8IXT5 1001 aaKnown RBP12.87□□□□□ -0.35
CCDC40-205ENST00000571028 TBC1D21Q8IYX1 336 aa12.87□□□□□ -0.35
CCDC40-205ENST00000571028 MYO1HQ8N1T3 1032 aa12.87□□□□□ -0.35
CCDC40-205ENST00000571028 SPATA6LQ8N4H0 392 aa12.87□□□□□ -0.35
CCDC40-205ENST00000571028 OR52E1Q8NGJ3 308 aa12.87□□□□□ -0.35
CCDC40-205ENST00000571028 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.87□□□□□ -0.35
CCDC40-205ENST00000571028 RSC1A1Q92681 617 aa12.87□□□□□ -0.35
CCDC40-205ENST00000571028 IL17FQ96PD4 163 aa12.87□□□□□ -0.35
CCDC40-205ENST00000571028 PAFAH2Q99487 392 aa12.87□□□□□ -0.35
CCDC40-205ENST00000571028 SPRY4Q9C004 299 aa12.87□□□□□ -0.35
CCDC40-205ENST00000571028 SRMSQ9H3Y6 488 aa12.87□□□□□ -0.35
CCDC40-205ENST00000571028 KIR3DX1Q9H7L2 352 aa12.87□□□□□ -0.35
CCDC40-205ENST00000571028 APMAPQ9HDC9 416 aa12.87□□□□□ -0.35
CCDC40-205ENST00000571028 KCND3Q9UK17 655 aa12.87□□□□□ -0.35
CCDC40-205ENST00000571028 SPENQ96T58 3664 aaKnown RBP12.87□□□□□ -0.35
CCDC40-205ENST00000571028 PIKFYVEQ9Y2I7 2098 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 LILRA5A6NI73 299 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 C1orf105O95561 183 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 SHBGP04278 402 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 RPN2P04844 631 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 ABHD2P08910 425 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 MPC1LP0DKB6 136 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 STMN1P16949 149 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 POLR2CP19387 275 aaPredicted RBP12.86□□□□□ -0.35
CCDC40-205ENST00000571028 GMPRP36959 345 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 PGDP52209 483 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 POU4F1Q01851 419 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 TSTA3Q13630 321 aaPredicted RBP12.86□□□□□ -0.35
CCDC40-205ENST00000571028 GBX1Q14549 363 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 IRGCQ6NXR0 463 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 WDR74Q6RFH5 385 aaPredicted RBP12.86□□□□□ -0.35
CCDC40-205ENST00000571028 C6orf15Q6UXA7 325 aaPredicted RBP12.86□□□□□ -0.35
CCDC40-205ENST00000571028 UNC5DQ6UXZ4 953 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 CYHR1Q6ZMK1 362 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 TAX1BP1Q86VP1 789 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 TICAM1Q8IUC6 712 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 SRRM1Q8IYB3 904 aaKnown RBP12.86□□□□□ -0.35
CCDC40-205ENST00000571028 OR5K2Q8NHB8 316 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 PRR7Q8TB68 274 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 AENQ8WTP8 325 aaKnown RBP12.86□□□□□ -0.35
CCDC40-205ENST00000571028 SLC44A1Q8WWI5 657 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 MOCOSQ96EN8 888 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 TSPAN17Q96FV3 270 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 TGM7Q96PF1 710 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 GPR22Q99680 433 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 CCDC77Q9BR77 488 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 MCMBPQ9BTE3 642 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 TWSG1Q9GZX9 223 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 EPB41L4BQ9H329 900 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 GPAMQ9HCL2 828 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 ABCF3Q9NUQ8 709 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 OGFRQ9NZT2 677 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 KLHL42Q9P2K6 505 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 POLG2Q9UHN1 485 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 CROTQ9UKG9 612 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 ITPR2Q14571 2701 aa12.86□□□□□ -0.35
CCDC40-205ENST00000571028 PIPSLA2A3N6 862 aa12.85□□□□□ -0.35
CCDC40-205ENST00000571028 GSAPA4D1B5 854 aa12.85□□□□□ -0.35
CCDC40-205ENST00000571028 ARHGEF33A8MVX0 844 aa12.85□□□□□ -0.35
CCDC40-205ENST00000571028 DLGAP3O95886 979 aa12.85□□□□□ -0.35
CCDC40-205ENST00000571028 CATP04040 527 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms