RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 TFR2Q9UP52 801 aa18.15■□□□□ 0.5
SCARF1-204ENST00000570902 MAU2Q9Y6X3 613 aa18.15■□□□□ 0.5
SCARF1-204ENST00000570902 FBN2P35556 2912 aa18.14■□□□□ 0.49
SCARF1-204ENST00000570902 HYKKA2RU49 373 aa18.14■□□□□ 0.49
SCARF1-204ENST00000570902 CCDC162PA2VCL2 907 aa18.14■□□□□ 0.49
SCARF1-204ENST00000570902 OR51F1A6NGY5 319 aa18.14■□□□□ 0.49
SCARF1-204ENST00000570902 RASGRF2O14827 1237 aa18.14■□□□□ 0.49
SCARF1-204ENST00000570902 ZGLP1P0C6A0 271 aa18.14■□□□□ 0.49
SCARF1-204ENST00000570902 CCR7P32248 378 aa18.14■□□□□ 0.49
SCARF1-204ENST00000570902 CYLC1P35663 651 aaPredicted RBP18.14■□□□□ 0.49
SCARF1-204ENST00000570902 TNFSF10P50591 281 aa18.14■□□□□ 0.49
SCARF1-204ENST00000570902 SPA17Q15506 151 aa18.14■□□□□ 0.49
SCARF1-204ENST00000570902 GFRALQ6UXV0 394 aa18.14■□□□□ 0.49
SCARF1-204ENST00000570902 TAX1BP1Q86VP1 789 aa18.14■□□□□ 0.49
SCARF1-204ENST00000570902 CCDC170Q8IYT3 715 aa18.14■□□□□ 0.49
SCARF1-204ENST00000570902 CFAP61Q8NHU2 1237 aa18.14■□□□□ 0.49
SCARF1-204ENST00000570902 STT3BQ8TCJ2 826 aa18.14■□□□□ 0.49
SCARF1-204ENST00000570902 CALR3Q96L12 384 aaKnown RBP18.14■□□□□ 0.49
SCARF1-204ENST00000570902 PANX2Q96RD6 677 aa18.14■□□□□ 0.49
SCARF1-204ENST00000570902 PCDHA13Q9Y5I0 950 aa18.14■□□□□ 0.49
SCARF1-204ENST00000570902 NSG1A0A0A6YYJ2 146 aa18.13■□□□□ 0.49
SCARF1-204ENST00000570902 OR1I1O60431 355 aa18.13■□□□□ 0.49
SCARF1-204ENST00000570902 GPC4O75487 556 aa18.13■□□□□ 0.49
SCARF1-204ENST00000570902 METTL18O95568 372 aa18.13■□□□□ 0.49
SCARF1-204ENST00000570902 APOA4P06727 396 aa18.13■□□□□ 0.49
SCARF1-204ENST00000570902 SOX11P35716 441 aa18.13■□□□□ 0.49
SCARF1-204ENST00000570902 PPARGP37231 505 aaPredicted RBP18.13■□□□□ 0.49
SCARF1-204ENST00000570902 RWDD2BP57060 319 aa18.13■□□□□ 0.49
SCARF1-204ENST00000570902 VSX2P58304 361 aaPredicted RBP18.13■□□□□ 0.49
SCARF1-204ENST00000570902 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.13■□□□□ 0.49
SCARF1-204ENST00000570902 WASHC2DQ5SRD0 308 aa18.13■□□□□ 0.49
SCARF1-204ENST00000570902 ATG9BQ674R7 924 aa18.13■□□□□ 0.49
SCARF1-204ENST00000570902 TTC23LQ6PF05 361 aa18.13■□□□□ 0.49
SCARF1-204ENST00000570902 AFTPHQ6ULP2 937 aa18.13■□□□□ 0.49
SCARF1-204ENST00000570902 TMEM207Q6UWW9 146 aa18.13■□□□□ 0.49
SCARF1-204ENST00000570902 BNC2Q6ZN30 1099 aaPredicted RBP18.13■□□□□ 0.49
SCARF1-204ENST00000570902 NDUFAF7Q7L592 441 aa18.13■□□□□ 0.49
SCARF1-204ENST00000570902 LINC00523Q86TU6 105 aa18.13■□□□□ 0.49
SCARF1-204ENST00000570902 ZNF808Q8N4W9 903 aaPredicted RBP18.13■□□□□ 0.49
SCARF1-204ENST00000570902 RAB42Q8N4Z0 105 aa18.13■□□□□ 0.49
SCARF1-204ENST00000570902 HAS2Q92819 552 aa18.13■□□□□ 0.49
SCARF1-204ENST00000570902 IL17FQ96PD4 163 aa18.13■□□□□ 0.49
SCARF1-204ENST00000570902 TAAR6Q96RI8 345 aa18.13■□□□□ 0.49
SCARF1-204ENST00000570902 PIH1D1Q9NWS0 290 aaKnown RBP18.13■□□□□ 0.49
SCARF1-204ENST00000570902 PTGFRNQ9P2B2 879 aa18.13■□□□□ 0.49
SCARF1-204ENST00000570902 C3orf18Q9UK00 162 aa18.13■□□□□ 0.49
SCARF1-204ENST00000570902 MRPS2Q9Y399 296 aaKnown RBP18.13■□□□□ 0.49
SCARF1-204ENST00000570902 CNTRLQ7Z7A1 2325 aa18.13■□□□□ 0.49
SCARF1-204ENST00000570902 CSMD2Q7Z408 3487 aa18.13■□□□□ 0.49
SCARF1-204ENST00000570902 SVILO95425 2214 aa18.13■□□□□ 0.49
SCARF1-204ENST00000570902 TRGV8A0A0C4DH27 118 aa18.12■□□□□ 0.49
SCARF1-204ENST00000570902 SOWAHDA6NJG2 315 aa18.12■□□□□ 0.49
SCARF1-204ENST00000570902 GAS8O95995 478 aa18.12■□□□□ 0.49
SCARF1-204ENST00000570902 PRR35P0CG20 571 aa18.12■□□□□ 0.49
SCARF1-204ENST00000570902 GRB7Q14451 532 aa18.12■□□□□ 0.49
SCARF1-204ENST00000570902 RPTNQ6XPR3 784 aa18.12■□□□□ 0.49
SCARF1-204ENST00000570902 VRK3Q8IV63 474 aa18.12■□□□□ 0.49
SCARF1-204ENST00000570902 FAM71DQ8N9W8 422 aa18.12■□□□□ 0.49
SCARF1-204ENST00000570902 LMNTD1Q8N9Z9 388 aa18.12■□□□□ 0.49
SCARF1-204ENST00000570902 C8orf44Q96CB5 159 aa18.12■□□□□ 0.49
SCARF1-204ENST00000570902 CARD6Q9BX69 1037 aa18.12■□□□□ 0.49
SCARF1-204ENST00000570902 CIDEBQ9UHD4 219 aa18.12■□□□□ 0.49
SCARF1-204ENST00000570902 KLK4Q9Y5K2 254 aa18.12■□□□□ 0.49
SCARF1-204ENST00000570902 MRFAP1Q9Y605 127 aa18.12■□□□□ 0.49
SCARF1-204ENST00000570902 GOLGA6L9A6NEM1 432 aa18.11■□□□□ 0.49
SCARF1-204ENST00000570902 CTSVO60911 334 aa18.11■□□□□ 0.49
SCARF1-204ENST00000570902 CRYABP02511 175 aaKnown RBP18.11■□□□□ 0.49
SCARF1-204ENST00000570902 SERPINA7P05543 415 aa18.11■□□□□ 0.49
SCARF1-204ENST00000570902 PTMAP06454 111 aaKnown RBP18.11■□□□□ 0.49
SCARF1-204ENST00000570902 UQCRHP07919 91 aa18.11■□□□□ 0.49
SCARF1-204ENST00000570902 MYBL2P10244 700 aa18.11■□□□□ 0.49
SCARF1-204ENST00000570902 COX6A1P12074 109 aa18.11■□□□□ 0.49
SCARF1-204ENST00000570902 COX6B1P14854 86 aa18.11■□□□□ 0.49
SCARF1-204ENST00000570902 CXCR2P25025 360 aa18.11■□□□□ 0.49
SCARF1-204ENST00000570902 HTR1EP28566 365 aa18.11■□□□□ 0.49
SCARF1-204ENST00000570902 TMED2Q15363 201 aa18.11■□□□□ 0.49
SCARF1-204ENST00000570902 ZNF630Q2M218 657 aaPredicted RBP18.11■□□□□ 0.49
SCARF1-204ENST00000570902 MUM1Q2TAK8 710 aa18.11■□□□□ 0.49
SCARF1-204ENST00000570902 CCDC38Q502W7 563 aa18.11■□□□□ 0.49
SCARF1-204ENST00000570902 CNSTQ6PJW8 725 aa18.11■□□□□ 0.49
SCARF1-204ENST00000570902 MRGPRGQ86SM5 289 aa18.11■□□□□ 0.49
SCARF1-204ENST00000570902 PRSS58Q8IYP2 241 aa18.11■□□□□ 0.49
SCARF1-204ENST00000570902 OR13J1Q8NGT2 312 aa18.11■□□□□ 0.49
SCARF1-204ENST00000570902 DNAJB8Q8NHS0 232 aa18.11■□□□□ 0.49
SCARF1-204ENST00000570902 GSDMBQ8TAX9 411 aa18.11■□□□□ 0.49
SCARF1-204ENST00000570902 BRIX1Q8TDN6 353 aaKnown RBP18.11■□□□□ 0.49
SCARF1-204ENST00000570902 PSMF1Q92530 271 aa18.11■□□□□ 0.49
SCARF1-204ENST00000570902 HDAC10Q969S8 669 aa18.11■□□□□ 0.49
SCARF1-204ENST00000570902 RAD51AP1Q96B01 352 aa18.11■□□□□ 0.49
SCARF1-204ENST00000570902 CCDC120Q96HB5 630 aa18.11■□□□□ 0.49
SCARF1-204ENST00000570902 MESP1Q9BRJ9 268 aa18.11■□□□□ 0.49
SCARF1-204ENST00000570902 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.11■□□□□ 0.49
SCARF1-204ENST00000570902 PLA2G3Q9NZ20 509 aa18.11■□□□□ 0.49
SCARF1-204ENST00000570902 ABI3Q9P2A4 366 aa18.11■□□□□ 0.49
SCARF1-204ENST00000570902 ZC3H7BQ9UGR2 993 aaKnown RBP18.11■□□□□ 0.49
SCARF1-204ENST00000570902 EPN1Q9Y6I3 576 aaPredicted RBP18.11■□□□□ 0.49
SCARF1-204ENST00000570902 PDZD2O15018 2839 aa18.1■□□□□ 0.49
SCARF1-204ENST00000570902 IGLV3-12A0A075B6K2 115 aa18.1■□□□□ 0.49
SCARF1-204ENST00000570902 A0A1W2PQ72 361 aa18.1■□□□□ 0.49
SCARF1-204ENST00000570902 CCL21O00585 134 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms