RNA–Protein interactions for RNA: ENST00000569904.5

SCAMP2-212, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-212ENST00000569904 Q6ZS92 163 aa11.86□□□□□ -0.51
SCAMP2-212ENST00000569904 IQCKQ8N0W5 287 aa11.86□□□□□ -0.51
SCAMP2-212ENST00000569904 RAB42Q8N4Z0 105 aa11.86□□□□□ -0.51
SCAMP2-212ENST00000569904 C2orf73Q8N5S3 287 aaPredicted RBP11.86□□□□□ -0.51
SCAMP2-212ENST00000569904 OR2L3Q8NG85 312 aa11.86□□□□□ -0.51
SCAMP2-212ENST00000569904 TM9SF4Q92544 642 aa11.86□□□□□ -0.51
SCAMP2-212ENST00000569904 SNRNP40Q96DI7 357 aaKnown RBP11.86□□□□□ -0.51
SCAMP2-212ENST00000569904 SELENOSQ9BQE4 189 aa11.86□□□□□ -0.51
SCAMP2-212ENST00000569904 SLC29A3Q9BZD2 475 aa11.86□□□□□ -0.51
SCAMP2-212ENST00000569904 ATP13A2Q9NQ11 1180 aa11.86□□□□□ -0.51
SCAMP2-212ENST00000569904 SYBUQ9NX95 663 aa11.86□□□□□ -0.51
SCAMP2-212ENST00000569904 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.86□□□□□ -0.51
SCAMP2-212ENST00000569904 TTC7AQ9ULT0 858 aaPredicted RBP11.86□□□□□ -0.51
SCAMP2-212ENST00000569904 HS3ST3B1Q9Y662 390 aa11.86□□□□□ -0.51
SCAMP2-212ENST00000569904 ICE1Q9Y2F5 2266 aa11.86□□□□□ -0.51
SCAMP2-212ENST00000569904 SPTAN1Q13813 2472 aaKnown RBP11.86□□□□□ -0.51
SCAMP2-212ENST00000569904 CPAMD8Q8IZJ3 1885 aa11.85□□□□□ -0.51
SCAMP2-212ENST00000569904 IGLV3-12A0A075B6K2 115 aa11.85□□□□□ -0.51
SCAMP2-212ENST00000569904 TCRBV7S3A2A0A539 114 aa11.85□□□□□ -0.51
SCAMP2-212ENST00000569904 OR2A25A4D2G3 310 aa11.85□□□□□ -0.51
SCAMP2-212ENST00000569904 WIPF3A6NGB9 483 aa11.85□□□□□ -0.51
SCAMP2-212ENST00000569904 VAPBO95292 243 aa11.85□□□□□ -0.51
SCAMP2-212ENST00000569904 ALAS2P22557 587 aa11.85□□□□□ -0.51
SCAMP2-212ENST00000569904 MCM3P25205 808 aa11.85□□□□□ -0.51
SCAMP2-212ENST00000569904 MGAT1P26572 445 aa11.85□□□□□ -0.51
SCAMP2-212ENST00000569904 BDKRB1P46663 353 aa11.85□□□□□ -0.51
SCAMP2-212ENST00000569904 KCNJ1P48048 391 aa11.85□□□□□ -0.51
SCAMP2-212ENST00000569904 FOXL2P58012 376 aa11.85□□□□□ -0.51
SCAMP2-212ENST00000569904 RAPSNQ13702 412 aa11.85□□□□□ -0.51
SCAMP2-212ENST00000569904 KCNJ11Q14654 390 aa11.85□□□□□ -0.51
SCAMP2-212ENST00000569904 ARHGAP19Q14CB8 494 aa11.85□□□□□ -0.51
SCAMP2-212ENST00000569904 PRMT9Q6P2P2 845 aa11.85□□□□□ -0.51
SCAMP2-212ENST00000569904 TAX1BP1Q86VP1 789 aa11.85□□□□□ -0.51
SCAMP2-212ENST00000569904 PRELID2Q8N945 189 aa11.85□□□□□ -0.51
SCAMP2-212ENST00000569904 TTC29Q8NA56 475 aaPredicted RBP11.85□□□□□ -0.51
SCAMP2-212ENST00000569904 TRIM58Q8NG06 486 aa11.85□□□□□ -0.51
SCAMP2-212ENST00000569904 GSDMBQ8TAX9 411 aa11.85□□□□□ -0.51
SCAMP2-212ENST00000569904 SSC4DQ8WTU2 575 aa11.85□□□□□ -0.51
SCAMP2-212ENST00000569904 INPP5DQ92835 1189 aa11.85□□□□□ -0.51
SCAMP2-212ENST00000569904 FOPNLQ96NB1 174 aa11.85□□□□□ -0.51
SCAMP2-212ENST00000569904 MFRPQ9BY79 579 aa11.85□□□□□ -0.51
SCAMP2-212ENST00000569904 SLC6A20Q9NP91 592 aa11.85□□□□□ -0.51
SCAMP2-212ENST00000569904 SEMA3GQ9NS98 782 aa11.85□□□□□ -0.51
SCAMP2-212ENST00000569904 INTS10Q9NVR2 710 aaKnown RBP11.85□□□□□ -0.51
SCAMP2-212ENST00000569904 IRAK4Q9NWZ3 460 aa11.85□□□□□ -0.51
SCAMP2-212ENST00000569904 KLHL42Q9P2K6 505 aa11.85□□□□□ -0.51
SCAMP2-212ENST00000569904 CIDEBQ9UHD4 219 aa11.85□□□□□ -0.51
SCAMP2-212ENST00000569904 A0A1W2PQ72 361 aa11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 MYO1CO00159 1063 aa11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 PFDN6O15212 129 aa11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 PHF2O75151 1096 aa11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 SEMA7AO75326 666 aa11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 PSIP1O75475 530 aaKnown RBP11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 AGFG2O95081 481 aa11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 MED26O95402 600 aa11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 CBX6O95503 412 aa11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 DDAH2O95865 285 aa11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 CCDC175P0C221 793 aa11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 MLNP12872 115 aa11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 PSMB5P28074 263 aa11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 EIF3BP55884 814 aaKnown RBP11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 RELAQ04206 551 aa11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 PRAMEF13Q5VWM6 474 aa11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 FRMPD2BQ6IN97 320 aa11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 KIRREL2Q6UWL6 708 aa11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 NEK10Q6ZWH5 1172 aa11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 CENPUQ71F23 418 aa11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 GSTA5Q7RTV2 222 aa11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 SDCCAG8Q86SQ7 713 aaPredicted RBP11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 CAND1Q86VP6 1230 aaKnown RBP11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 CILP2Q8IUL8 1156 aa11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 FBXO15Q8NCQ5 510 aaPredicted RBP11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 PPP4R1Q8TF05 950 aa11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 COG1Q8WTW3 980 aa11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 MVB12AQ96EY5 273 aa11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 MIPEPQ99797 713 aa11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 ZBTB20Q9HC78 741 aaPredicted RBP11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 LRRC4CQ9HCJ2 640 aa11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 LZTFL1Q9NQ48 299 aa11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 LUZP4Q9P127 313 aa11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 FBXL4Q9UKA2 621 aa11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 RUVBL2Q9Y230 463 aaKnown RBP11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 VPS9D1Q9Y2B5 631 aa11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 PCDHGA10Q9Y5H3 936 aa11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 FAM169AQ9Y6X4 670 aa11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 RP1L1Q8IWN7 2480 aaPredicted RBP11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 SPTBN1Q01082 2364 aaKnown RBP11.84□□□□□ -0.51
SCAMP2-212ENST00000569904 HYKKA2RU49 373 aa11.83□□□□□ -0.52
SCAMP2-212ENST00000569904 KRT87PA6NCN2 255 aa11.83□□□□□ -0.52
SCAMP2-212ENST00000569904 ARHGEF33A8MVX0 844 aa11.83□□□□□ -0.52
SCAMP2-212ENST00000569904 NIPSNAP2O75323 286 aa11.83□□□□□ -0.52
SCAMP2-212ENST00000569904 FMO4P31512 558 aa11.83□□□□□ -0.52
SCAMP2-212ENST00000569904 CLCN7P51798 805 aa11.83□□□□□ -0.52
SCAMP2-212ENST00000569904 VSX2P58304 361 aaPredicted RBP11.83□□□□□ -0.52
SCAMP2-212ENST00000569904 SARNPP82979 210 aaKnown RBP11.83□□□□□ -0.52
SCAMP2-212ENST00000569904 MRPL49Q13405 166 aaKnown RBP11.83□□□□□ -0.52
SCAMP2-212ENST00000569904 FASTKQ14296 549 aaKnown RBP11.83□□□□□ -0.52
SCAMP2-212ENST00000569904 PRTGQ2VWP7 1150 aa11.83□□□□□ -0.52
SCAMP2-212ENST00000569904 ANKRD20A4Q4UJ75 823 aa11.83□□□□□ -0.52
SCAMP2-212ENST00000569904 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms