RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	CCDC103	Q8IW40	242 aa		11.7	□□□□□ -0.54
SPG7-222	ENST00000569820	C7orf61	Q8IZ16	206 aa		11.7	□□□□□ -0.54
SPG7-222	ENST00000569820	SIMC1	Q8NDZ2	872 aa		11.7	□□□□□ -0.54
SPG7-222	ENST00000569820	POF1B	Q8WVV4	589 aa		11.7	□□□□□ -0.54
SPG7-222	ENST00000569820	TUBGCP3	Q96CW5	907 aa		11.7	□□□□□ -0.54
SPG7-222	ENST00000569820	TBATA	Q96M53	351 aa		11.7	□□□□□ -0.54
SPG7-222	ENST00000569820	AMBRA1	Q9C0C7	1298 aa		11.7	□□□□□ -0.54
SPG7-222	ENST00000569820	SMG9	Q9H0W8	520 aa	Known RBP	11.7	□□□□□ -0.54
SPG7-222	ENST00000569820	SMURF2	Q9HAU4	748 aa		11.7	□□□□□ -0.54
SPG7-222	ENST00000569820	USP22	Q9UPT9	525 aa		11.7	□□□□□ -0.54
SPG7-222	ENST00000569820	EIF3L	Q9Y262	564 aa	Known RBP	11.7	□□□□□ -0.54
SPG7-222	ENST00000569820	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	LINC01553	A4QN01	128 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	LEFTY2	O00292	366 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	GSTM1	P09488	218 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	RAP2A	P10114	183 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	HGF	P14210	728 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	LBP	P18428	481 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	ZNF140	P52738	457 aa	Predicted RBP	11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	EPHA5	P54756	1037 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	KCNAB2	Q13303	367 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	ACAP2	Q15057	778 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	STK11	Q15831	433 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	FAM98B	Q52LJ0	330 aa	Known RBP	11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	INO80D	Q53TQ3	878 aa	Predicted RBP	11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	ZNF678	Q5SXM1	525 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	DESI1	Q6ICB0	168 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	LAIR2	Q6ISS4	152 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	PLD3	Q8IV08	490 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	SPNS2	Q8IVW8	549 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	OR13C4	Q8NGS5	318 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	OR6P1	Q8NGX9	317 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	MCFD2	Q8NI22	146 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	GRPEL2	Q8TAA5	225 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	PHOSPHO2	Q8TCD6	241 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	TWIST2	Q8WVJ9	160 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	GIMAP5	Q96F15	307 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	ZNF300	Q96RE9	604 aa	Predicted RBP	11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	SYTL2	Q9HCH5	934 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	ANKH	Q9HCJ1	492 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	SLC52A3	Q9NQ40	469 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	MAGEL2	Q9UJ55	1249 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	RIMKLB	Q9ULI2	386 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	CLEC4E	Q9ULY5	219 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	UGT2A1	Q9Y4X1	527 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	PCDHGC4	Q9Y5F7	938 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	PCDHGB1	Q9Y5G3	927 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	RAI2	Q9Y5P3	530 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	ATG2A	Q2TAZ0	1938 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	NOBOX	O60393	691 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	RPP40	O75818	363 aa	Known RBP	11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	BMP1	P13497	986 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	SPN	P16150	400 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	SYN1	P17600	705 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	PFKL	P17858	780 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	CLCN5	P51795	746 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	CDH13	P55290	713 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	GLYAT	Q6IB77	296 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	NCEH1	Q6PIU2	408 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	UTS2B	Q765I0	119 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	PRSS48	Q7RTY5	328 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	LDB1	Q86U70	411 aa	Predicted RBP	11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	PHYKPL	Q8IUZ5	450 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	APCDD1	Q8J025	514 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	TSPEAR	Q8WU66	669 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	YIPF6	Q96EC8	236 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	TCEAL4	Q96EI5	215 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	L3HYPDH	Q96EM0	354 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	SMIM14	Q96QK8	99 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	ZNF221	Q9UK13	617 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	INTS6	Q9UL03	887 aa	Known RBP	11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	CCL26	Q9Y258	94 aa		11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	FCF1	Q9Y324	198 aa	Known RBP	11.69	□□□□□ -0.54
SPG7-222	ENST00000569820	SHOX	O15266	292 aa		11.68	□□□□□ -0.54
SPG7-222	ENST00000569820	MOSPD3	O75425	235 aa		11.68	□□□□□ -0.54
SPG7-222	ENST00000569820	S1PR4	O95977	384 aa		11.68	□□□□□ -0.54
SPG7-222	ENST00000569820	GOT2	P00505	430 aa	Known RBP	11.68	□□□□□ -0.54
SPG7-222	ENST00000569820	RRM2	P31350	389 aa		11.68	□□□□□ -0.54
SPG7-222	ENST00000569820	IRS1	P35568	1242 aa		11.68	□□□□□ -0.54
SPG7-222	ENST00000569820	OR4D2	P58180	307 aa		11.68	□□□□□ -0.54
SPG7-222	ENST00000569820	SH3BP2	P78314	561 aa		11.68	□□□□□ -0.54
SPG7-222	ENST00000569820	GALK2	Q01415	458 aa		11.68	□□□□□ -0.54
SPG7-222	ENST00000569820	CHRNB3	Q05901	458 aa		11.68	□□□□□ -0.54
SPG7-222	ENST00000569820	CAMK1	Q14012	370 aa		11.68	□□□□□ -0.54
SPG7-222	ENST00000569820	DGCR6	Q14129	220 aa		11.68	□□□□□ -0.54
SPG7-222	ENST00000569820	SEMA3A	Q14563	771 aa		11.68	□□□□□ -0.54
SPG7-222	ENST00000569820	DUSP7	Q16829	419 aa		11.68	□□□□□ -0.54
SPG7-222	ENST00000569820	MPPE1	Q53F39	396 aa		11.68	□□□□□ -0.54
SPG7-222	ENST00000569820	PAGE3	Q5JUK9	113 aa		11.68	□□□□□ -0.54
SPG7-222	ENST00000569820	MPP7	Q5T2T1	576 aa		11.68	□□□□□ -0.54
SPG7-222	ENST00000569820	CCNJ	Q5T5M9	372 aa		11.68	□□□□□ -0.54
SPG7-222	ENST00000569820	NEK5	Q6P3R8	708 aa		11.68	□□□□□ -0.54
SPG7-222	ENST00000569820	PRR23B	Q6ZRT6	265 aa		11.68	□□□□□ -0.54
SPG7-222	ENST00000569820	LPCAT1	Q8NF37	534 aa		11.68	□□□□□ -0.54
SPG7-222	ENST00000569820	MDGA1	Q8NFP4	955 aa		11.68	□□□□□ -0.54
SPG7-222	ENST00000569820	PJA1	Q8NG27	643 aa		11.68	□□□□□ -0.54
SPG7-222	ENST00000569820	ITFG1	Q8TB96	612 aa		11.68	□□□□□ -0.54
SPG7-222	ENST00000569820	MCOLN3	Q8TDD5	553 aa		11.68	□□□□□ -0.54
SPG7-222	ENST00000569820	PROX1	Q92786	737 aa		11.68	□□□□□ -0.54
SPG7-222	ENST00000569820	METTL2A	Q96IZ6	378 aa	Known RBP	11.68	□□□□□ -0.54

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