RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 ITGAXP20702 1163 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 PSMA5P28066 241 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 CDC25CP30307 473 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 DCTDP32321 178 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 SOX6P35712 828 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 RPL3P39023 403 aaKnown RBP4.53□□□□□ -1.68
CHD9-220ENST00000569794 DHPSP49366 369 aaPredicted RBP4.53□□□□□ -1.68
CHD9-220ENST00000569794 UCP2P55851 309 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 PMP22Q01453 160 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 GCNT1Q02742 428 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 OVGP1Q12889 678 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 LRRC23Q53EV4 343 aaPredicted RBP4.53□□□□□ -1.68
CHD9-220ENST00000569794 HSP90B2PQ58FF3 399 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 LRIF1Q5T3J3 769 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 RNASEH2BQ5TBB1 312 aaKnown RBP4.53□□□□□ -1.68
CHD9-220ENST00000569794 RAET1GQ6H3X3 334 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 NCAPH2Q6IBW4 605 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 OR6B2Q6IFH4 312 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 NEK5Q6P3R8 708 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 ZYG11AQ6WRX3 759 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 SLC36A4Q6YBV0 504 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 MTSS1LQ765P7 747 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 DET1Q7L5Y6 550 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 TLK2Q86UE8 772 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 ZNF410Q86VK4 478 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 FBXO39Q8N4B4 442 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 AGBL3Q8NEM8 1001 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 OR10S1Q8NGN2 331 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 EXOC6Q8TAG9 804 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 HEXDCQ8WVB3 486 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 ROBO4Q8WZ75 1007 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 ARHGAP45Q92619 1136 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 SLAMF9Q96A28 289 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 SPACA9Q96E40 222 aaPredicted RBP4.53□□□□□ -1.68
CHD9-220ENST00000569794 RRNAD1Q96FB5 475 aaKnown RBP4.53□□□□□ -1.68
CHD9-220ENST00000569794 SIN3AQ96ST3 1273 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 TPPP3Q9BW30 176 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 TEX13AQ9BXU3 409 aaPredicted RBP4.53□□□□□ -1.68
CHD9-220ENST00000569794 SPATC1LQ9H0A9 340 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 RAB17Q9H0T7 212 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 FZD8Q9H461 694 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 RPAP3Q9H6T3 665 aaPredicted RBP4.53□□□□□ -1.68
CHD9-220ENST00000569794 RNPEPL1Q9HAU8 725 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 TMEM51Q9NW97 253 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 NLKQ9UBE8 527 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 IL17BQ9UHF5 180 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 ATP6V1HQ9UI12 483 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 TRMT6Q9UJA5 497 aaKnown RBP4.53□□□□□ -1.68
CHD9-220ENST00000569794 NUDCQ9Y266 331 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 ASB3Q9Y575 518 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 KDRP35968 1356 aa4.53□□□□□ -1.69
CHD9-220ENST00000569794 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 IGKV3D-20A0A0C4DH25 116 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 C13orf42A0A1B0GVH6 325 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 LRRIQ4A6NIV6 560 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 H0YIN7 160 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 RSL1D1O76021 490 aaKnown RBP4.52□□□□□ -1.69
CHD9-220ENST00000569794 AMBPP02760 352 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 HOXB5P09067 269 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 ZNF883P0CG24 379 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 VCLP18206 1134 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 GNAZP19086 355 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 NR1D1P20393 614 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 CCND2P30279 289 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 SSTR2P30874 369 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 WNT5AP41221 380 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 SCGB2A2Q13296 93 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 PTPRCAPQ14761 206 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 RPE65Q16518 533 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 CALCRLQ16602 461 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 VWC2Q2TAL6 325 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 IQCCQ4KMZ1 466 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 ZNF789Q5FWF6 425 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 STXBP5Q5T5C0 1151 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 ATAD3BQ5T9A4 648 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 PRAMEF8Q5VWM4 474 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 LRRC8EQ6NSJ5 796 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 MACC1Q6ZN28 852 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 TMEM182Q6ZP80 229 aaPredicted RBP4.52□□□□□ -1.69
CHD9-220ENST00000569794 TMC8Q8IU68 726 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 FAM219AQ8IW50 185 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 MCEMP1Q8IX19 187 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 C4orf19Q8IY42 314 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 RASGEF1CQ8N431 466 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 CCDC148Q8NFR7 591 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 OR52M1Q8NGK5 317 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 OR8K5Q8NH50 307 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 AGR3Q8TD06 166 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 CHURC1Q8WUH1 139 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 TMEM186Q96B77 213 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 MRPL38Q96DV4 380 aaKnown RBP4.52□□□□□ -1.69
CHD9-220ENST00000569794 ARSGQ96EG1 525 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 GIMAP5Q96F15 307 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 CFAP36Q96G28 342 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 COG3Q96JB2 828 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 KLHL5Q96PQ7 755 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 TEFMQ96QE5 360 aaKnown RBP4.52□□□□□ -1.69
CHD9-220ENST00000569794 NUDCD1Q96RS6 583 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 NAP1L3Q99457 506 aaPredicted RBP4.52□□□□□ -1.69
CHD9-220ENST00000569794 TBCDQ9BTW9 1192 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms