RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 SEMA3AQ14563 771 aa12.59□□□□□ -0.39
SPG7-221ENST00000569720 NR6A1Q15406 480 aa12.59□□□□□ -0.39
SPG7-221ENST00000569720 FAM214AQ32MH5 1076 aa12.59□□□□□ -0.39
SPG7-221ENST00000569720 C4orf22Q6V702 233 aa12.59□□□□□ -0.39
SPG7-221ENST00000569720 OVCH1Q7RTY7 1134 aa12.59□□□□□ -0.39
SPG7-221ENST00000569720 LRRC6Q86X45 466 aa12.59□□□□□ -0.39
SPG7-221ENST00000569720 KRT222Q8N1A0 295 aa12.59□□□□□ -0.39
SPG7-221ENST00000569720 MPP5Q8N3R9 675 aa12.59□□□□□ -0.39
SPG7-221ENST00000569720 CISD2Q8N5K1 135 aaKnown RBP12.59□□□□□ -0.39
SPG7-221ENST00000569720 LKAAEAR1Q8TD35 194 aa12.59□□□□□ -0.39
SPG7-221ENST00000569720 ZNF592Q92610 1267 aa12.59□□□□□ -0.39
SPG7-221ENST00000569720 ZUFSPQ96AP4 578 aa12.59□□□□□ -0.39
SPG7-221ENST00000569720 RAD51AP1Q96B01 352 aa12.59□□□□□ -0.39
SPG7-221ENST00000569720 C19orf60Q96EN9 201 aa12.59□□□□□ -0.39
SPG7-221ENST00000569720 FOPNLQ96NB1 174 aa12.59□□□□□ -0.39
SPG7-221ENST00000569720 IL17FQ96PD4 163 aa12.59□□□□□ -0.39
SPG7-221ENST00000569720 SELENOSQ9BQE4 189 aa12.59□□□□□ -0.39
SPG7-221ENST00000569720 MENTQ9BUN1 341 aa12.59□□□□□ -0.39
SPG7-221ENST00000569720 MRM3Q9HC36 420 aaKnown RBP12.59□□□□□ -0.39
SPG7-221ENST00000569720 CHRAC1Q9NRG0 131 aa12.59□□□□□ -0.39
SPG7-221ENST00000569720 CUTCQ9NTM9 273 aa12.59□□□□□ -0.39
SPG7-221ENST00000569720 ASF1BQ9NVP2 202 aa12.59□□□□□ -0.39
SPG7-221ENST00000569720 IL1RAPL1Q9NZN1 696 aa12.59□□□□□ -0.39
SPG7-221ENST00000569720 CIDEBQ9UHD4 219 aa12.59□□□□□ -0.39
SPG7-221ENST00000569720 NXT1Q9UKK6 140 aaKnown RBP12.59□□□□□ -0.39
SPG7-221ENST00000569720 COPG1Q9Y678 874 aaKnown RBP12.59□□□□□ -0.39
SPG7-221ENST00000569720 CENPEQ02224 2701 aa12.58□□□□□ -0.4
SPG7-221ENST00000569720 TARM1B6A8C7 271 aa12.58□□□□□ -0.4
SPG7-221ENST00000569720 PFDN6O15212 129 aa12.58□□□□□ -0.4
SPG7-221ENST00000569720 SRPX2O60687 465 aaPredicted RBP12.58□□□□□ -0.4
SPG7-221ENST00000569720 ONECUT2O95948 504 aa12.58□□□□□ -0.4
SPG7-221ENST00000569720 ETS1P14921 441 aa12.58□□□□□ -0.4
SPG7-221ENST00000569720 ITGAXP20702 1163 aa12.58□□□□□ -0.4
SPG7-221ENST00000569720 CCNFP41002 786 aa12.58□□□□□ -0.4
SPG7-221ENST00000569720 GRIA3P42263 894 aa12.58□□□□□ -0.4
SPG7-221ENST00000569720 GCGRP47871 477 aa12.58□□□□□ -0.4
SPG7-221ENST00000569720 GLRBP48167 497 aa12.58□□□□□ -0.4
SPG7-221ENST00000569720 SESN2P58004 480 aaPredicted RBP12.58□□□□□ -0.4
SPG7-221ENST00000569720 GRB7Q14451 532 aa12.58□□□□□ -0.4
SPG7-221ENST00000569720 CYP1B1Q16678 543 aa12.58□□□□□ -0.4
SPG7-221ENST00000569720 PRAMEF13Q5VWM6 474 aa12.58□□□□□ -0.4
SPG7-221ENST00000569720 FCRL6Q6DN72 434 aa12.58□□□□□ -0.4
SPG7-221ENST00000569720 Q6ZS92 163 aa12.58□□□□□ -0.4
SPG7-221ENST00000569720 OTOAQ7RTW8 1153 aa12.58□□□□□ -0.4
SPG7-221ENST00000569720 LDB1Q86U70 411 aaPredicted RBP12.58□□□□□ -0.4
SPG7-221ENST00000569720 OTUD6BQ8N6M0 293 aa12.58□□□□□ -0.4
SPG7-221ENST00000569720 LMNTD1Q8N9Z9 388 aa12.58□□□□□ -0.4
SPG7-221ENST00000569720 MAGEC3Q8TD91 643 aa12.58□□□□□ -0.4
SPG7-221ENST00000569720 GRK7Q8WTQ7 553 aa12.58□□□□□ -0.4
SPG7-221ENST00000569720 COG1Q8WTW3 980 aa12.58□□□□□ -0.4
SPG7-221ENST00000569720 IL22Q9GZX6 179 aa12.58□□□□□ -0.4
SPG7-221ENST00000569720 SLC26A1Q9H2B4 701 aa12.58□□□□□ -0.4
SPG7-221ENST00000569720 SLC6A20Q9NP91 592 aa12.58□□□□□ -0.4
SPG7-221ENST00000569720 EIF2B3Q9NR50 452 aaKnown RBP12.58□□□□□ -0.4
SPG7-221ENST00000569720 AGPAT4Q9NRZ5 378 aa12.58□□□□□ -0.4
SPG7-221ENST00000569720 SLC22A11Q9NSA0 550 aa12.58□□□□□ -0.4
SPG7-221ENST00000569720 BFARQ9NZS9 450 aa12.58□□□□□ -0.4
SPG7-221ENST00000569720 FAM169AQ9Y6X4 670 aa12.58□□□□□ -0.4
SPG7-221ENST00000569720 NOTCH2Q04721 2471 aa12.57□□□□□ -0.4
SPG7-221ENST00000569720 ANKUB1A6NFN9 424 aa12.57□□□□□ -0.4
SPG7-221ENST00000569720 CBX6O95503 412 aa12.57□□□□□ -0.4
SPG7-221ENST00000569720 RPS3P23396 243 aaKnown RBP eCLIP12.57□□□□□ -0.4
SPG7-221ENST00000569720 CXCR5P32302 372 aa12.57□□□□□ -0.4
SPG7-221ENST00000569720 NPY2RP49146 381 aa12.57□□□□□ -0.4
SPG7-221ENST00000569720 FNTAP49354 379 aa12.57□□□□□ -0.4
SPG7-221ENST00000569720 FOXL2P58012 376 aa12.57□□□□□ -0.4
SPG7-221ENST00000569720 NAA25Q14CX7 972 aa12.57□□□□□ -0.4
SPG7-221ENST00000569720 RBBP7Q16576 425 aa12.57□□□□□ -0.4
SPG7-221ENST00000569720 NKG7Q16617 165 aa12.57□□□□□ -0.4
SPG7-221ENST00000569720 TUBB8Q3ZCM7 444 aa12.57□□□□□ -0.4
SPG7-221ENST00000569720 AGAP7PQ5VUJ5 663 aa12.57□□□□□ -0.4
SPG7-221ENST00000569720 HIST2H2BCQ6DN03 193 aa12.57□□□□□ -0.4
SPG7-221ENST00000569720 SYDE1Q6ZW31 735 aaPredicted RBP12.57□□□□□ -0.4
SPG7-221ENST00000569720 SDCCAG8Q86SQ7 713 aaPredicted RBP12.57□□□□□ -0.4
SPG7-221ENST00000569720 PRUNE1Q86TP1 453 aa12.57□□□□□ -0.4
SPG7-221ENST00000569720 AGAP4Q96P64 663 aa12.57□□□□□ -0.4
SPG7-221ENST00000569720 SPSB2Q99619 263 aa12.57□□□□□ -0.4
SPG7-221ENST00000569720 WDR77Q9BQA1 342 aaPredicted RBP12.57□□□□□ -0.4
SPG7-221ENST00000569720 P2RY12Q9H244 342 aa12.57□□□□□ -0.4
SPG7-221ENST00000569720 L2HGDHQ9H9P8 463 aa12.57□□□□□ -0.4
SPG7-221ENST00000569720 SEMA3GQ9NS98 782 aa12.57□□□□□ -0.4
SPG7-221ENST00000569720 MARCH4Q9P2E8 410 aaPredicted RBP12.57□□□□□ -0.4
SPG7-221ENST00000569720 FBXL4Q9UKA2 621 aa12.57□□□□□ -0.4
SPG7-221ENST00000569720 DOPEY1Q5JWR5 2465 aa12.57□□□□□ -0.4
SPG7-221ENST00000569720 CNTRLQ7Z7A1 2325 aa12.57□□□□□ -0.4
SPG7-221ENST00000569720 A1L4Q6 167 aa12.56□□□□□ -0.4
SPG7-221ENST00000569720 FITM1A5D6W6 292 aa12.56□□□□□ -0.4
SPG7-221ENST00000569720 MASP2O00187 686 aa12.56□□□□□ -0.4
SPG7-221ENST00000569720 SOCS6O14544 535 aa12.56□□□□□ -0.4
SPG7-221ENST00000569720 NDC80O14777 642 aa12.56□□□□□ -0.4
SPG7-221ENST00000569720 PRICKLE3O43900 615 aaPredicted RBP12.56□□□□□ -0.4
SPG7-221ENST00000569720 C1orf105O95561 183 aa12.56□□□□□ -0.4
SPG7-221ENST00000569720 MCM3P25205 808 aa12.56□□□□□ -0.4
SPG7-221ENST00000569720 RPL22P35268 128 aaKnown RBP12.56□□□□□ -0.4
SPG7-221ENST00000569720 CARSP49589 748 aaKnown RBP12.56□□□□□ -0.4
SPG7-221ENST00000569720 EIF3BP55884 814 aaKnown RBP12.56□□□□□ -0.4
SPG7-221ENST00000569720 VSX2P58304 361 aaPredicted RBP12.56□□□□□ -0.4
SPG7-221ENST00000569720 BASP1P80723 227 aaKnown RBP12.56□□□□□ -0.4
SPG7-221ENST00000569720 WASHC2DQ5SRD0 308 aa12.56□□□□□ -0.4
SPG7-221ENST00000569720 MRNIPQ6NTE8 343 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms