RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 CNTN1Q12860 1018 aa17.59■□□□□ 0.41
SMPD3-211ENST00000568373 CSTF3Q12996 717 aaKnown RBP17.59■□□□□ 0.41
SMPD3-211ENST00000568373 EGFLAMQ63HQ2 1017 aa17.59■□□□□ 0.41
SMPD3-211ENST00000568373 GRHL2Q6ISB3 625 aa17.59■□□□□ 0.41
SMPD3-211ENST00000568373 ZNF547Q8IVP9 402 aa17.59■□□□□ 0.41
SMPD3-211ENST00000568373 APLFQ8IW19 511 aaPredicted RBP17.59■□□□□ 0.41
SMPD3-211ENST00000568373 YAF2Q8IY57 180 aa17.59■□□□□ 0.41
SMPD3-211ENST00000568373 ERLEC1Q96DZ1 483 aa17.59■□□□□ 0.41
SMPD3-211ENST00000568373 CHFRQ96EP1 664 aa17.59■□□□□ 0.41
SMPD3-211ENST00000568373 APOLD1Q96LR9 279 aa17.59■□□□□ 0.41
SMPD3-211ENST00000568373 ZNF597Q96LX8 424 aa17.59■□□□□ 0.41
SMPD3-211ENST00000568373 TSSK3Q96PN8 268 aa17.59■□□□□ 0.41
SMPD3-211ENST00000568373 PLA2G2FQ9BZM2 168 aa17.59■□□□□ 0.41
SMPD3-211ENST00000568373 FADS3Q9Y5Q0 445 aa17.59■□□□□ 0.41
SMPD3-211ENST00000568373 AK5Q9Y6K8 562 aa17.59■□□□□ 0.41
SMPD3-211ENST00000568373 FASP25445 335 aa17.59■□□□□ 0.41
SMPD3-211ENST00000568373 EIF2DP41214 584 aaKnown RBP17.59■□□□□ 0.41
SMPD3-211ENST00000568373 HNF4AP41235 474 aa17.59■□□□□ 0.41
SMPD3-211ENST00000568373 CCR3P51677 355 aa17.59■□□□□ 0.41
SMPD3-211ENST00000568373 CHN2P52757 468 aa17.59■□□□□ 0.41
SMPD3-211ENST00000568373 C6orf52Q5T4I8 152 aa17.59■□□□□ 0.41
SMPD3-211ENST00000568373 SYCE2Q6PIF2 218 aa17.59■□□□□ 0.41
SMPD3-211ENST00000568373 XKR5Q6UX68 686 aa17.59■□□□□ 0.41
SMPD3-211ENST00000568373 RNF175Q8N4F7 328 aa17.59■□□□□ 0.41
SMPD3-211ENST00000568373 CSGALNACT1Q8TDX6 532 aa17.59■□□□□ 0.41
SMPD3-211ENST00000568373 TESCQ96BS2 214 aa17.59■□□□□ 0.41
SMPD3-211ENST00000568373 FCRL1Q96LA6 429 aa17.59■□□□□ 0.41
SMPD3-211ENST00000568373 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.59■□□□□ 0.41
SMPD3-211ENST00000568373 ANAPC2Q9UJX6 822 aa17.59■□□□□ 0.41
SMPD3-211ENST00000568373 C17orf113A0A1B0GUU1 675 aa17.58■□□□□ 0.4
SMPD3-211ENST00000568373 H0YIV9 168 aa17.58■□□□□ 0.4
SMPD3-211ENST00000568373 VEGFDO43915 354 aa17.58■□□□□ 0.4
SMPD3-211ENST00000568373 FCGR1AP12314 374 aa17.58■□□□□ 0.4
SMPD3-211ENST00000568373 ZNF8P17098 575 aaPredicted RBP17.58■□□□□ 0.4
SMPD3-211ENST00000568373 PIP5KL1Q5T9C9 394 aa17.58■□□□□ 0.4
SMPD3-211ENST00000568373 FAM46CQ5VWP2 391 aa17.58■□□□□ 0.4
SMPD3-211ENST00000568373 GLYATQ6IB77 296 aa17.58■□□□□ 0.4
SMPD3-211ENST00000568373 NOXRED1Q6NXP6 359 aa17.58■□□□□ 0.4
SMPD3-211ENST00000568373 MSRB3Q8IXL7 192 aa17.58■□□□□ 0.4
SMPD3-211ENST00000568373 DTWD1Q8N5C7 304 aa17.58■□□□□ 0.4
SMPD3-211ENST00000568373 PAPD5Q8NDF8 572 aaKnown RBP17.58■□□□□ 0.4
SMPD3-211ENST00000568373 DNAJB8Q8NHS0 232 aa17.58■□□□□ 0.4
SMPD3-211ENST00000568373 NSMCE2Q96MF7 247 aa17.58■□□□□ 0.4
SMPD3-211ENST00000568373 ZNF583Q96ND8 569 aa17.58■□□□□ 0.4
SMPD3-211ENST00000568373 SLC29A1Q99808 456 aa17.58■□□□□ 0.4
SMPD3-211ENST00000568373 SLC25A37Q9NYZ2 338 aa17.58■□□□□ 0.4
SMPD3-211ENST00000568373 GPR34Q9UPC5 381 aa17.58■□□□□ 0.4
SMPD3-211ENST00000568373 C7orf72A4D263 438 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 AP1G1O43747 822 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 TPST1O60507 370 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 LINGO3P0C6S8 592 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 CKMT2P17540 419 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 PSMC3P17980 439 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 S100A3P33764 101 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 GRIA2P42262 883 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 PHC1P78364 1004 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 PLOD1Q02809 727 aaPredicted RBP17.57■□□□□ 0.4
SMPD3-211ENST00000568373 PRKCQQ04759 706 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 CYP4F3Q08477 520 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 DNAJC14Q6Y2X3 702 aaPredicted RBP17.57■□□□□ 0.4
SMPD3-211ENST00000568373 TMEM184AQ6ZMB5 413 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 ZBTB49Q6ZSB9 765 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 RIMKLAQ8IXN7 391 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 ZNF480Q8WV37 535 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 BIRC7Q96CA5 298 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 HIC2Q96JB3 615 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 SH3GL1Q99961 368 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 SPATA6Q9NWH7 488 aaPredicted RBP17.57■□□□□ 0.4
SMPD3-211ENST00000568373 VPS29Q9UBQ0 182 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 PPT2Q9UMR5 302 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 TRBV5-3A0A0A0MS03 114 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 LINC01565O15544 149 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 ERN1O75460 977 aaKnown RBP17.57■□□□□ 0.4
SMPD3-211ENST00000568373 POP7O75817 140 aaKnown RBP17.57■□□□□ 0.4
SMPD3-211ENST00000568373 RUNDC3AQ59EK9 446 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 CRTC3Q6UUV7 619 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 AADATQ8N5Z0 425 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 OR2L2Q8NH16 312 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 HM13Q8TCT9 377 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 CENPNQ96H22 339 aaPredicted RBP17.57■□□□□ 0.4
SMPD3-211ENST00000568373 CNBD2Q96M20 576 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 CCDC115Q96NT0 180 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 HHIPQ96QV1 700 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 MYADMQ96S97 322 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 MTERF1Q99551 399 aaKnown RBP17.57■□□□□ 0.4
SMPD3-211ENST00000568373 KXD1Q9BQD3 176 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 THUMPD3Q9BV44 507 aaKnown RBP17.57■□□□□ 0.4
SMPD3-211ENST00000568373 DPEP2Q9H4A9 486 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 IKZF5Q9H5V7 419 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 SERHLQ9NQF3 203 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 UBAP1Q9NZ09 502 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 GPRC5BQ9NZH0 403 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 MAN2B2Q9Y2E5 1009 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 KCNE2Q9Y6J6 123 aa17.57■□□□□ 0.4
SMPD3-211ENST00000568373 HSD3B1P14060 373 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 GGT1P19440 569 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 HSD3B2P26439 372 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 DRD3P35462 400 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 E2F2Q14209 437 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 PPP4R4Q6NUP7 873 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms