RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 INTS9Q9NV88 658 aaKnown RBP13□□□□□ -0.33
CLK3-218ENST00000566926 SOHLH2Q9NX45 425 aa13□□□□□ -0.33
CLK3-218ENST00000566926 OR6C2Q9NZP2 312 aa13□□□□□ -0.33
CLK3-218ENST00000566926 POMT2Q9UKY4 750 aa13□□□□□ -0.33
CLK3-218ENST00000566926 RARRES3Q9UL19 164 aa13□□□□□ -0.33
CLK3-218ENST00000566926 SLC39A10Q9ULF5 831 aa13□□□□□ -0.33
CLK3-218ENST00000566926 GRID1Q9ULK0 1009 aa13□□□□□ -0.33
CLK3-218ENST00000566926 CDYLQ9Y232 598 aa13□□□□□ -0.33
CLK3-218ENST00000566926 CRYL1Q9Y2S2 319 aa13□□□□□ -0.33
CLK3-218ENST00000566926 VWA7Q9Y334 891 aa13□□□□□ -0.33
CLK3-218ENST00000566926 TMEM184BQ9Y519 407 aaPredicted RBP13□□□□□ -0.33
CLK3-218ENST00000566926 ZFHX4Q86UP3 3567 aa13□□□□□ -0.33
CLK3-218ENST00000566926 ZFYVE26Q68DK2 2539 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 A0A096LPK6 155 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 BTN3A1O00481 513 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 RAD1O60671 282 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 STK17BO94768 372 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 PRDX3P30048 256 aaKnown RBP12.99□□□□□ -0.33
CLK3-218ENST00000566926 MDH1P40925 334 aaKnown RBP12.99□□□□□ -0.33
CLK3-218ENST00000566926 CSRP3P50461 194 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 PPP1CAP62136 330 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 SH3BP2P78314 561 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 ABRQ12979 859 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 TUBB3Q13509 450 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 MAP7Q14244 749 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 TGIF1Q15583 401 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 TSNAXIP1Q2TAA8 658 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 TTLL9Q3SXZ7 439 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.99□□□□□ -0.33
CLK3-218ENST00000566926 ARHGAP40Q5TG30 622 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 UGT3A1Q6NUS8 523 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 CNSTQ6PJW8 725 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 RAPH1Q70E73 1250 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 DCUN1D3Q8IWE4 304 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 CACNA2D3Q8IZS8 1091 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 D2HGDHQ8N465 521 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 RAB42Q8N4Z0 105 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 OR8K5Q8NH50 307 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 CFAP61Q8NHU2 1237 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 LKAAEAR1Q8TD35 194 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 SNRNP27Q8WVK2 155 aaKnown RBP12.99□□□□□ -0.33
CLK3-218ENST00000566926 SKA2Q8WVK7 121 aaPredicted RBP12.99□□□□□ -0.33
CLK3-218ENST00000566926 KCNJ9Q92806 393 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 NKD1Q969G9 470 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 PMEPA1Q969W9 287 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 KIAA1143Q96AT1 154 aaPredicted RBP12.99□□□□□ -0.33
CLK3-218ENST00000566926 ELMO2Q96JJ3 720 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 CAPS2Q9BXY5 557 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 FANCEQ9HB96 536 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 CPNE5Q9HCH3 593 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 LATS2Q9NRM7 1088 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 PCMTD2Q9NV79 361 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 TAS2R13Q9NYV9 303 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 ACTR10Q9NZ32 417 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 MID2Q9UJV3 735 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 PILRAQ9UKJ1 303 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 ADAM21Q9UKJ8 722 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 BTRCQ9Y297 605 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 MTO1Q9Y2Z2 717 aaKnown RBP12.99□□□□□ -0.33
CLK3-218ENST00000566926 ACOT9Q9Y305 439 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 CFAP47Q6ZTR5 3102 aa12.99□□□□□ -0.33
CLK3-218ENST00000566926 BTN3A3O00478 584 aa12.98□□□□□ -0.33
CLK3-218ENST00000566926 FDXRP22570 491 aa12.98□□□□□ -0.33
CLK3-218ENST00000566926 RAB28P51157 221 aa12.98□□□□□ -0.33
CLK3-218ENST00000566926 RHDQ02161 417 aa12.98□□□□□ -0.33
CLK3-218ENST00000566926 ABHD18Q0P651 414 aa12.98□□□□□ -0.33
CLK3-218ENST00000566926 KIR2DS3Q14952 304 aa12.98□□□□□ -0.33
CLK3-218ENST00000566926 CCDC153Q494R4 210 aa12.98□□□□□ -0.33
CLK3-218ENST00000566926 CTSL3PQ5NE16 218 aa12.98□□□□□ -0.33
CLK3-218ENST00000566926 HECTD2Q5U5R9 776 aa12.98□□□□□ -0.33
CLK3-218ENST00000566926 TBC1D1Q86TI0 1168 aaPredicted RBP12.98□□□□□ -0.33
CLK3-218ENST00000566926 VRK3Q8IV63 474 aa12.98□□□□□ -0.33
CLK3-218ENST00000566926 ADGRF3Q8IZF5 1079 aa12.98□□□□□ -0.33
CLK3-218ENST00000566926 ESX1Q8N693 406 aa12.98□□□□□ -0.33
CLK3-218ENST00000566926 DYDC1Q8WWB3 177 aa12.98□□□□□ -0.33
CLK3-218ENST00000566926 RAD51AP1Q96B01 352 aa12.98□□□□□ -0.33
CLK3-218ENST00000566926 SLC22A18Q96BI1 424 aa12.98□□□□□ -0.33
CLK3-218ENST00000566926 CRELD1Q96HD1 420 aa12.98□□□□□ -0.33
CLK3-218ENST00000566926 UBL7Q96S82 380 aaPredicted RBP12.98□□□□□ -0.33
CLK3-218ENST00000566926 AARSD1Q9BTE6 412 aaKnown RBP12.98□□□□□ -0.33
CLK3-218ENST00000566926 RAB11FIP5Q9BXF6 653 aa12.98□□□□□ -0.33
CLK3-218ENST00000566926 ULBP3Q9BZM4 244 aa12.98□□□□□ -0.33
CLK3-218ENST00000566926 SPRY4Q9C004 299 aa12.98□□□□□ -0.33
CLK3-218ENST00000566926 XKR8Q9H6D3 395 aa12.98□□□□□ -0.33
CLK3-218ENST00000566926 FGF21Q9NSA1 209 aa12.98□□□□□ -0.33
CLK3-218ENST00000566926 KLHL42Q9P2K6 505 aa12.98□□□□□ -0.33
CLK3-218ENST00000566926 ICKQ9UPZ9 632 aa12.98□□□□□ -0.33
CLK3-218ENST00000566926 PLLPQ9Y342 182 aa12.98□□□□□ -0.33
CLK3-218ENST00000566926 ITPR1Q14643 2758 aa12.98□□□□□ -0.33
CLK3-218ENST00000566926 HEATR5BQ9P2D3 2071 aa12.97□□□□□ -0.33
CLK3-218ENST00000566926 GOLGA8RI6L899 631 aa12.97□□□□□ -0.33
CLK3-218ENST00000566926 RRP9O43818 475 aaKnown RBP12.97□□□□□ -0.33
CLK3-218ENST00000566926 NIPSNAP2O75323 286 aa12.97□□□□□ -0.33
CLK3-218ENST00000566926 VPS26AO75436 327 aa12.97□□□□□ -0.33
CLK3-218ENST00000566926 C2P06681 752 aa12.97□□□□□ -0.33
CLK3-218ENST00000566926 CHRM5P08912 532 aaPredicted RBP12.97□□□□□ -0.33
CLK3-218ENST00000566926 CCNYL3P0C7X3 344 aa12.97□□□□□ -0.33
CLK3-218ENST00000566926 MSL3P1P0C860 447 aa12.97□□□□□ -0.33
CLK3-218ENST00000566926 FOLR1P15328 257 aa12.97□□□□□ -0.33
CLK3-218ENST00000566926 CHN1P15882 459 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms