RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 RFPL2O75678 378 aa16.33■□□□□ 0.2
CMTM3-213ENST00000566756 MYOGP15173 224 aa16.33■□□□□ 0.2
CMTM3-213ENST00000566756 BPIP17213 487 aa16.33■□□□□ 0.2
CMTM3-213ENST00000566756 GJA1P17302 382 aa16.33■□□□□ 0.2
CMTM3-213ENST00000566756 CD247P20963 164 aa16.33■□□□□ 0.2
CMTM3-213ENST00000566756 UGT1A1P22309 533 aa16.33■□□□□ 0.2
CMTM3-213ENST00000566756 UGT1A4P22310 534 aa16.33■□□□□ 0.2
CMTM3-213ENST00000566756 UGT1A3P35503 534 aa16.33■□□□□ 0.2
CMTM3-213ENST00000566756 UGT1A5P35504 534 aa16.33■□□□□ 0.2
CMTM3-213ENST00000566756 NSG1P42857 185 aa16.33■□□□□ 0.2
CMTM3-213ENST00000566756 GDF5P43026 501 aa16.33■□□□□ 0.2
CMTM3-213ENST00000566756 ERVK-21P61565 698 aa16.33■□□□□ 0.2
CMTM3-213ENST00000566756 BOP1Q14137 746 aaKnown RBP16.33■□□□□ 0.2
CMTM3-213ENST00000566756 SPRED2Q7Z698 418 aa16.33■□□□□ 0.2
CMTM3-213ENST00000566756 CMTM8Q8IZV2 173 aa16.33■□□□□ 0.2
CMTM3-213ENST00000566756 NUDT8Q8WV74 236 aa16.33■□□□□ 0.2
CMTM3-213ENST00000566756 FAM120BQ96EK7 910 aaKnown RBP16.33■□□□□ 0.2
CMTM3-213ENST00000566756 CCDC97Q96F63 343 aaPredicted RBP16.33■□□□□ 0.2
CMTM3-213ENST00000566756 PYURFQ96I23 114 aa16.33■□□□□ 0.2
CMTM3-213ENST00000566756 COX4I2Q96KJ9 171 aa16.33■□□□□ 0.2
CMTM3-213ENST00000566756 TNKS2Q9H2K2 1166 aa16.33■□□□□ 0.2
CMTM3-213ENST00000566756 SERHLQ9NQF3 203 aa16.33■□□□□ 0.2
CMTM3-213ENST00000566756 FARSBQ9NSD9 589 aaKnown RBP16.33■□□□□ 0.2
CMTM3-213ENST00000566756 LMCD1Q9NZU5 365 aa16.33■□□□□ 0.2
CMTM3-213ENST00000566756 ERVW-1Q9UQF0 538 aa16.33■□□□□ 0.2
CMTM3-213ENST00000566756 PCDHB14Q9Y5E9 798 aa16.33■□□□□ 0.2
CMTM3-213ENST00000566756 ORC6Q9Y5N6 252 aa16.33■□□□□ 0.2
CMTM3-213ENST00000566756 TMX2-CTNND1H3BSU7 103 aa16.32■□□□□ 0.2
CMTM3-213ENST00000566756 PER2O15055 1255 aa16.32■□□□□ 0.2
CMTM3-213ENST00000566756 XYLBO75191 536 aa16.32■□□□□ 0.2
CMTM3-213ENST00000566756 CLPXO76031 633 aa16.32■□□□□ 0.2
CMTM3-213ENST00000566756 PLA2G16P53816 162 aa16.32■□□□□ 0.2
CMTM3-213ENST00000566756 CD47Q08722 323 aa16.32■□□□□ 0.2
CMTM3-213ENST00000566756 BNIP3Q12983 259 aa16.32■□□□□ 0.2
CMTM3-213ENST00000566756 CDH18Q13634 790 aa16.32■□□□□ 0.2
CMTM3-213ENST00000566756 ARHGAP15Q53QZ3 475 aa16.32■□□□□ 0.2
CMTM3-213ENST00000566756 DUS1LQ6P1R4 473 aaKnown RBP16.32■□□□□ 0.2
CMTM3-213ENST00000566756 SHQ1Q6PI26 577 aaKnown RBP16.32■□□□□ 0.2
CMTM3-213ENST00000566756 SPESP1Q6UW49 350 aa16.32■□□□□ 0.2
CMTM3-213ENST00000566756 BBS7Q8IWZ6 715 aa16.32■□□□□ 0.2
CMTM3-213ENST00000566756 CLDN19Q8N6F1 224 aa16.32■□□□□ 0.2
CMTM3-213ENST00000566756 GIPC3Q8TF64 312 aa16.32■□□□□ 0.2
CMTM3-213ENST00000566756 FKBP10Q96AY3 582 aa16.32■□□□□ 0.2
CMTM3-213ENST00000566756 ZFP14Q9HCL3 533 aa16.32■□□□□ 0.2
CMTM3-213ENST00000566756 SNX6Q9UNH7 406 aa16.32■□□□□ 0.2
CMTM3-213ENST00000566756 SNX5Q9Y5X3 404 aa16.32■□□□□ 0.2
CMTM3-213ENST00000566756 AREL1O15033 823 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 CA3P07451 260 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 RHOP08100 348 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 EPCAMP16422 314 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 ZNF182P17025 639 aaPredicted RBP16.31■□□□□ 0.2
CMTM3-213ENST00000566756 ITGB6P18564 788 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 S100A3P33764 101 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 CA5AP35218 305 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 HNF1BP35680 557 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 PIGAP37287 484 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 BMXP51813 675 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 PLIN5Q00G26 463 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 ZNF33BQ06732 778 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 CHRNA6Q15825 494 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 C9orf50Q5SZB4 431 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 TPGS1Q6ZTW0 290 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 DCP2Q8IU60 420 aaKnown RBP16.31■□□□□ 0.2
CMTM3-213ENST00000566756 ZC3H7AQ8IWR0 971 aaKnown RBP16.31■□□□□ 0.2
CMTM3-213ENST00000566756 KRTCAP2Q8N6L1 136 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 ARL10Q8N8L6 244 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 SETD9Q8NE22 299 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 CMTM7Q96FZ5 175 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 ACPTQ9BZG2 426 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 TRIT1Q9H3H1 467 aaKnown RBP16.31■□□□□ 0.2
CMTM3-213ENST00000566756 ATP13A3Q9H7F0 1226 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 PARVBQ9HBI1 364 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 IRAK4Q9NWZ3 460 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 ZDHHC3Q9NYG2 299 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 SAMD4AQ9UPU9 718 aaKnown RBP16.31■□□□□ 0.2
CMTM3-213ENST00000566756 CCNDBP1O95273 360 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 HTR1AP08908 422 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 IL7RP16871 459 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 PTPN6P29350 595 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 GSTM4Q03013 218 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 ABRQ12979 859 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 CTU2Q2VPK5 515 aaKnown RBP16.31■□□□□ 0.2
CMTM3-213ENST00000566756 PRSS36Q5K4E3 855 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 GCNT7Q6ZNI0 430 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 DET1Q7L5Y6 550 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 ANKRD13BQ86YJ7 626 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 BEND7Q8N7W2 519 aaPredicted RBP16.31■□□□□ 0.2
CMTM3-213ENST00000566756 FIBINQ8TAL6 211 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 NCLNQ969V3 563 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 CCDC138Q96M89 665 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 RAD21L1Q9H4I0 556 aa16.31■□□□□ 0.2
CMTM3-213ENST00000566756 CHCHD3Q9NX63 227 aaKnown RBP16.31■□□□□ 0.2
CMTM3-213ENST00000566756 TMEFF2Q9UIK5 374 aaPredicted RBP16.31■□□□□ 0.2
CMTM3-213ENST00000566756 TSR3Q9UJK0 312 aaKnown RBP16.31■□□□□ 0.2
CMTM3-213ENST00000566756 ATG2AQ2TAZ0 1938 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 KCNE1BA0A087WTH5 132 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 GRXCR1A8MXD5 290 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 SLC1A7O00341 560 aa16.3■□□□□ 0.2
CMTM3-213ENST00000566756 SCAMP3O14828 347 aaKnown RBP16.3■□□□□ 0.2
CMTM3-213ENST00000566756 MRPS14O60783 128 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms