RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 ENPP2Q13822 863 aa13.31□□□□□ -0.28
CX3CL1-204ENST00000565912 ARMCX6Q7L4S7 300 aa13.31□□□□□ -0.28
CX3CL1-204ENST00000565912 SLC29A4Q7RTT9 530 aa13.31□□□□□ -0.28
CX3CL1-204ENST00000565912 SDR16C5Q8N3Y7 309 aa13.31□□□□□ -0.28
CX3CL1-204ENST00000565912 OR5K1Q8NHB7 308 aa13.31□□□□□ -0.28
CX3CL1-204ENST00000565912 POF1BQ8WVV4 589 aa13.31□□□□□ -0.28
CX3CL1-204ENST00000565912 TNFRSF25Q93038 417 aa13.31□□□□□ -0.28
CX3CL1-204ENST00000565912 GPR88Q9GZN0 384 aa13.31□□□□□ -0.28
CX3CL1-204ENST00000565912 TFB2MQ9H5Q4 396 aaKnown RBP13.31□□□□□ -0.28
CX3CL1-204ENST00000565912 MEMO1Q9Y316 297 aa13.31□□□□□ -0.28
CX3CL1-204ENST00000565912 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.31□□□□□ -0.28
CX3CL1-204ENST00000565912 GJA1P17302 382 aa13.31□□□□□ -0.28
CX3CL1-204ENST00000565912 FMO3P31513 532 aa13.31□□□□□ -0.28
CX3CL1-204ENST00000565912 PBX1P40424 430 aa13.31□□□□□ -0.28
CX3CL1-204ENST00000565912 FPGSQ05932 587 aa13.31□□□□□ -0.28
CX3CL1-204ENST00000565912 BNIP1Q12981 228 aa13.31□□□□□ -0.28
CX3CL1-204ENST00000565912 IQCCQ4KMZ1 466 aa13.31□□□□□ -0.28
CX3CL1-204ENST00000565912 PRPF38BQ5VTL8 546 aaKnown RBP13.31□□□□□ -0.28
CX3CL1-204ENST00000565912 RGMAQ96B86 450 aa13.31□□□□□ -0.28
CX3CL1-204ENST00000565912 FAM124BQ9H5Z6 455 aaPredicted RBP13.31□□□□□ -0.28
CX3CL1-204ENST00000565912 KAT8Q9H7Z6 458 aaKnown RBP13.31□□□□□ -0.28
CX3CL1-204ENST00000565912 PCDHB11Q9Y5F2 797 aa13.31□□□□□ -0.28
CX3CL1-204ENST00000565912 MON2Q7Z3U7 1717 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 H0YGN5 161 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 SHOX2O60902 331 aaPredicted RBP13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 COL9A3Q14050 684 aaPredicted RBP13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 PRAMEF14Q5SWL7 426 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 PRAMEF13Q5VWM6 474 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 TRMT10BQ6PF06 316 aaKnown RBP13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 ZNF366Q8N895 744 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 SLC35A5Q9BS91 424 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 DNAJB9Q9UBS3 223 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 RPL36Q9Y3U8 105 aaKnown RBP13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 SPIN1Q9Y657 262 aaPredicted RBP13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 BCL9LQ86UU0 1499 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 H3BNX3 289 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 ORC5O43913 435 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 ITGB1P05556 798 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 SNHG28P0DPA3 235 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 ADH5P11766 374 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 PCSK2P16519 638 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 NDUFS1P28331 727 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 ASPAP45381 313 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 CLCNKAP51800 687 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 XKP51811 444 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 HMGCS1Q01581 520 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 CSTF1Q05048 431 aaKnown RBP13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 KLHL26Q53HC5 615 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 TPGS2Q68CL5 300 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 PAQR3Q6TCH7 311 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 PNLDC1Q8NA58 520 aaKnown RBP13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 FUBP3Q96I24 572 aaKnown RBP eCLIP13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 COQ10BQ9H8M1 238 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 EIF2B3Q9NR50 452 aaKnown RBP13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 ZDHHC3Q9NYG2 299 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 SQORQ9Y6N5 450 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 HAS3O00219 553 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 TOR1BO14657 336 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 RB1P06400 928 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 AP2S1P53680 142 aaPredicted RBP13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 CD47Q08722 323 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 DPY19L1Q2PZI1 675 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 SLC30A8Q8IWU4 369 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 OXR1Q8N573 874 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 OR10G2Q8NGC3 310 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 ST6GALNAC4Q9H4F1 302 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 VPS29Q9UBQ0 182 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 L7N2F9 121 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 TACSTD2P09758 323 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 MTHFD1P11586 935 aaKnown RBP13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 OR12D2P58182 307 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 VAMP2P63027 116 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 FUT2Q10981 343 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 TMEM44Q2T9K0 475 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 KLHL36Q8N4N3 616 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 TMEM156Q8N614 296 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 ADAD1Q96M93 576 aaKnown RBP13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 CAMK1GQ96NX5 476 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 DENND2DQ9H6A0 471 aaPredicted RBP13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 PPM1HQ9ULR3 514 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 ASB3Q9Y575 518 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 TLL2Q9Y6L7 1015 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 A0A1W2PRQ8 180 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 RPP14O95059 124 aaKnown RBP13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 KLK1P06870 262 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 ZNF3P17036 446 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 HCAR3P49019 387 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 MAZP56270 477 aaKnown RBP13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 GPR33Q49SQ1 333 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 GXYLT1Q4G148 440 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 COLEC12Q5KU26 742 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 ACDQ96AP0 544 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 HAPLN3Q96S86 360 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 AMBNQ9NP70 447 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 TIMMDC1Q9NPL8 285 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 KLRF1Q9NZS2 232 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 BAIAP2Q9UQB8 552 aa13.3□□□□□ -0.28
CX3CL1-204ENST00000565912 CLEC3AO75596 197 aa13.29□□□□□ -0.28
CX3CL1-204ENST00000565912 TRAPPC6AO75865 159 aa13.29□□□□□ -0.28
CX3CL1-204ENST00000565912 CHRNB2P17787 502 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms