RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 FAM169AQ9Y6X4 670 aa11.68□□□□□ -0.54
GTF3C1-204ENST00000564664 SPTBN1Q01082 2364 aaKnown RBP11.68□□□□□ -0.54
GTF3C1-204ENST00000564664 SNRNP200O75643 2136 aaKnown RBP11.68□□□□□ -0.54
GTF3C1-204ENST00000564664 CCDC88CQ9P219 2028 aa11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 SDR42E2A6NKP2 422 aa11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 CNOT3O75175 753 aaKnown RBP11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 DDAH2O95865 285 aa11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 CTSBP07858 339 aa11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 CHRM3P20309 590 aa11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 GNLYP22749 145 aa11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 MGAT1P26572 445 aa11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 ARNTP27540 789 aa11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 FMO4P31512 558 aa11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 KCNJ1P48048 391 aa11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 CARSP49589 748 aaKnown RBP11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 GBX1Q14549 363 aa11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 SLC9A5Q14940 896 aa11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 PLEKHN1Q494U1 663 aaPredicted RBP11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 WASHC2DQ5SRD0 308 aa11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 NEPROQ6NW34 567 aa11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 LRRC8AQ8IWT6 810 aa11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 FAM20CQ8IXL6 584 aa11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 IQCKQ8N0W5 287 aa11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 C2orf73Q8N5S3 287 aaPredicted RBP11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 OTUD6BQ8N6M0 293 aa11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 Q8NA96 180 aa11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 MCUQ8NE86 351 aa11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 OR2L3Q8NG85 312 aa11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 OR2A1Q8NGT9 310 aa11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 OR9A1PQ8NGU1 263 aa11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 NAP1L3Q99457 506 aaPredicted RBP11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 ZNF552Q9H707 407 aaPredicted RBP11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 SYBUQ9NX95 663 aa11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 SAMD15Q9P1V8 674 aa11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 CDC14AQ9UNH5 594 aa11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 KLHL20Q9Y2M5 609 aa11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 FER1L5A0AVI2 2057 aa11.67□□□□□ -0.54
GTF3C1-204ENST00000564664 SPTAN1Q13813 2472 aaKnown RBP11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 PCM1Q15154 2024 aa11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 FAM237BA0A1B0GVD1 139 aa11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 HYKKA2RU49 373 aa11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 VSTM2BA6NLU5 285 aa11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 MYO1CO00159 1063 aa11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 TXNDC9O14530 226 aa11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 PCDH17O14917 1159 aa11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 PSIP1O75475 530 aaKnown RBP11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 AGFG2O95081 481 aa11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 ERGP11308 486 aa11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 PKMP14618 531 aaKnown RBP11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 CMPK1P30085 196 aa11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 OCA2Q04671 838 aa11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 NKG7Q16617 165 aa11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 TTLL9Q3SXZ7 439 aa11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 CTSL3PQ5NE16 218 aa11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 AGAP7PQ5VUJ5 663 aa11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 IRAK1BP1Q5VVH5 260 aa11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 PRAMEF13Q5VWM6 474 aa11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 FBXO42Q6P3S6 717 aa11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 CILP2Q8IUL8 1156 aa11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 LMNTD2Q8IXW0 634 aa11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 PRELID2Q8N945 189 aa11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 FBXO15Q8NCQ5 510 aaPredicted RBP11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 SMPDL3AQ92484 453 aa11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 MVB12AQ96EY5 273 aa11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 PBKQ96KB5 322 aa11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 AGAP4Q96P64 663 aa11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 MFRPQ9BY79 579 aa11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 XAB2Q9HCS7 855 aaKnown RBP11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 ZNF304Q9HCX3 659 aa11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 CDC23Q9UJX2 597 aa11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 NFS1Q9Y697 457 aa11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 COMMD10Q9Y6G5 202 aa11.66□□□□□ -0.54
GTF3C1-204ENST00000564664 SHANK1Q9Y566 2161 aa11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 CNTRLQ7Z7A1 2325 aa11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 A0A1W2PPV9 198 aa11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 BLACEA4D250 179 aa11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 OR2A25A4D2G3 310 aa11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 CYSRT1A8MQ03 144 aa11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 TCP11X1B4DZS4 312 aa11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 E5RI56 91 aa11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 PRPF4O43172 522 aaKnown RBP eCLIP11.65□□□□□ -0.541e-9■■■■■ 31.7
GTF3C1-204ENST00000564664 CTSVO60911 334 aa11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 VPS26AO75436 327 aa11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 CCNDBP1O95273 360 aa11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 KRT14P02533 472 aa11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 CATP04040 527 aaKnown RBP11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 VSX2P58304 361 aaPredicted RBP11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 ABATP80404 500 aa11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 GPS1Q13098 491 aa11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 KCNJ11Q14654 390 aa11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 MUM1Q2TAK8 710 aa11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 GARNL3Q5VVW2 1013 aa11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 CASC4Q6P4E1 433 aa11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 CNSTQ6PJW8 725 aa11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 IGFL2Q6UWQ7 119 aa11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 Q6ZS92 163 aa11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 RNF44Q7L0R7 432 aa11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 TAX1BP1Q86VP1 789 aa11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 CAND1Q86VP6 1230 aaKnown RBP11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 CALML6Q8TD86 181 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms